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jalview.git
2015-03-15
Charles Ofoegbu
JAL-1667 updated test and internationalization messages
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2015-03-06
Charles Ofoegbu
JAL-1668 added filtering and sorting capabilites
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2015-03-06
Charles Ofoegbu
JAL-1667 refactoring to support JAL-1668
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2015-03-04
Charles Ofoegbu
JAL-1668 First version JAL-1668
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2015-03-02
Charles Ofoegbu
house keeping
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2015-02-26
Charles Ofoegbu
JAL-1667 PDBe Search Interface implementation
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2015-02-19
gmungoc
JAL-1665 refactored Sequence.getSequenceFeatures
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2015-02-12
Jim Procter
JAL-1350 added to 2.9 release notes
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2015-02-12
Jim Procter
JAL-1350 document changed behaviour
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2015-02-12
Jim Procter
JAL-1350 forgot to remove empty test
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2015-02-12
Jim Procter
JAL-1350 pass the columnselection rather then selected...
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2015-02-12
Jim Procter
JAL-1350 cloned method and tested equivalence for using...
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2015-02-12
Jim Procter
JAL-1115 switch to lists in SequenceGroup
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2015-02-12
Jim Procter
JAL-1115 typecast
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2015-02-12
Jim Procter
javadoc
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2015-02-12
Jim Procter
JAL-1115 List rather than vector for sequence groups...
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2015-02-06
Jim Procter
Merge branch 'bug/JAL-1643_File-chooser-improvement...
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2015-02-05
Charles Ofoegbu
merge commit
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2015-02-05
Jim Procter
JAL-1643 jarred up the quaqua native libraries and...
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2015-02-05
Jim Procter
JAL-1643 added quaqua filechooser and jni libraries...
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2015-02-05
Jim Procter
JAL-1643 correct version of quaqua (8) plus THIRDPARTYL...
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2015-02-05
Jim Procter
JAL-1643 renamed quaqua library to add version number
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2015-02-04
Charles Ofoegbu
JAL-1643 modified jalviewFileChooser to retain default...
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2015-02-04
Charles Ofoegbu
JAL-1643 Modified JalviewFileChooser to have a more...
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2015-02-02
Charles Ofoegbu
Merge branch 'bug/JAL-1644_Finder-logic-improvement...
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2015-02-02
Charles Ofoegbu
JAL-1644 added null check for sequence description...
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2015-02-02
Charles Ofoegbu
Merge commit
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2015-02-02
Charles Ofoegbu
JAL-1644 revised Finder's implementation to use a flag...
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2015-02-02
Charles Ofoegbu
Merge branch 'bug/JAL-1644_Finder-logic-improvement...
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2015-02-02
Charles Ofoegbu
JAL-1644 improvment of finder logic to include the...
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2015-01-28
Jim Procter
JAL-1565 automatically mark query sequence as the seque...
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2015-01-28
Jim Procter
JAL-674 patch to make Mapping.compareTransferredToR...
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2015-01-27
Jim Procter
JAL-674 JAL-1270 added settings to ensure temperature...
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2015-01-27
gmungoc
JAL-1588 new class renamed
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2015-01-26
gmungoc
Merge branch 'features/JAL-1588saveChimeraSession'...
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2015-01-26
gmungoc
JAL-1588 restoring saved Chimera session(s)
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2015-01-23
Charles Ofoegbu
Merge branch 'features/JAL-1553_improvement-select...
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2015-01-23
gmungoc
JAL-1588 first working (?) restore of Chimera session...
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2015-01-23
Charles Ofoegbu
JAL-1553 added help documentation and updated Annotatio...
features/JAL-1553_improvement-select-column-by-annotation-row-query-interface
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2015-01-23
Jim Procter
Merge branch 'feature_29/JAL-1372_referenceseq' into...
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2015-01-23
Jim Procter
JAL-1541 changed assert to JUnit assert - test now...
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2015-01-23
Jim Procter
JAL-1551 formatting
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2015-01-23
Jim Procter
JAL-1286 don't print an exception if a non-gzip stream...
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2015-01-23
Jim Procter
JAL-1551 crlf changes
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2015-01-23
Jim Procter
JAL-969 hasHiddenRows is now an interface method
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2015-01-23
Jim Procter
JAL-969 drop the hiddenColumns flag in favour of checki...
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2015-01-23
Jim Procter
Merge branch 'develop' into feature_29/JAL-1372_referen...
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2015-01-23
Jim Procter
JAL-1628 tweak signature of core annotation printer...
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2015-01-23
Jim Procter
JAL-1551 formatting/imports
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2015-01-23
Jim Procter
JAL-1551 JAL-962 formatting and code change ripples...
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2015-01-23
Charles Ofoegbu
Merge branch 'features/JAL-1553_improvement-select...
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2015-01-23
Charles Ofoegbu
Merge branch 'develop' of https://source.jalview.org...
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2015-01-23
Charles Ofoegbu
JAL-1553 fixed null pointer exception thrown in SeqCanv...
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2015-01-23
Jim Procter
JAL-1551 source code formatting
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2015-01-23
Jim Procter
JAL-969 javadoc and mark interface overrides for clarity
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2015-01-23
Jim Procter
JAL-1628 drop getShowAnnotation accessor in favour...
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2015-01-22
Charles Ofoegbu
Merge branch 'features/JAL-1553_improvement-select...
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2015-01-22
Charles Ofoegbu
JAL-1553 added applet support for the select-column...
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2015-01-22
Jim Procter
JAL-1372 JAL-1169 documentation for new commands HIDE_I...
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2015-01-21
Jim Procter
Merge branch 'develop' into feature_29/JAL-1372_referen...
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2015-01-21
Jim Procter
tidy up class files that shouldn't be in repo
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2015-01-20
Charles Ofoegbu
Merge branch 'features/JAL-1553_improvement-select...
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2015-01-20
Charles Ofoegbu
clean up
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2015-01-20
Charles Ofoegbu
clean up
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2015-01-20
Charles Ofoegbu
Merge branch 'features/JAL-1553_improvement-select...
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2015-01-20
Charles Ofoegbu
Further abstractions and clean up
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2015-01-20
Charles Ofoegbu
Merge branch 'features/JAL-1553_improvement-select...
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2015-01-20
Charles Ofoegbu
basic house keeping
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2015-01-20
Jim Procter
JAL-1304 revamped annotation file documentation structu...
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2015-01-20
Charles Ofoegbu
Merge branch 'features/JAL-1553_improvement-select...
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2015-01-20
Charles Ofoegbu
JAL-1553 enhancement of column selection by annotation...
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2015-01-18
Jim Procter
JAL-1372 i18n and tweaking set/unset representative...
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2015-01-18
Jim Procter
JAL-1628 formatting
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2015-01-18
Jim Procter
JAL-1628 employ new AnnotationFile reader method to...
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2015-01-18
Jim Procter
JAL-1628 new entry point for reading annotation files...
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2015-01-18
Jim Procter
JAL-1628 formatting and javadoc
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2015-01-18
Jim Procter
JAL-1628 method to hide insertions to current sequence...
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2015-01-18
Jim Procter
JAL-1628 wrappers for common checks on ColumnSelection
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2015-01-18
Jim Procter
JAL-1628 ColumnSelection method to hide insertions...
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2015-01-18
Jim Procter
JAL-1628 new method to get a list of insertions in...
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2015-01-18
Jim Procter
always use interface rather than field access
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2015-01-18
Jim Procter
JAL-1372 JAL-1114 JAL-1628 tidy sequenceI/sequence
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2015-01-14
gmungoc
JAL-1629 .jar option removed from Alignment File Save...
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2015-01-14
Charles Ofoegbu
Merge branch 'features/JAL-1553_select-columns-by-annot...
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2015-01-14
Charles Ofoegbu
Modified AnnotationColumnChooser to maintain state...
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2015-01-13
Charles Ofoegbu
Merge branch 'features/JAL-1553_select-columns-by-annot...
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2015-01-13
Charles Ofoegbu
Refactored AnnotationColumnChoser and AnnotationColorCh...
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2015-01-10
Charles Ofoegbu
JAL-1553 merge commit
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2015-01-10
Charles Ofoegbu
JAL-1553 implementation of column selection by annotati...
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2015-01-09
Jim Procter
Merge branch 'JAL-1372_referenceseq' into feature_29...
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2015-01-09
Charles Ofoegbu
Merge branch 'features/JAL-1605_html-svg-export' into...
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2015-01-09
Jim Procter
Merge branch 'JAL-1483_29dev' into develop
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2015-01-09
Jim Procter
JAL-1483 formatting
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2015-01-09
Jim Procter
JAL-1483 remember to look at base dataset sequence...
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2015-01-09
gmungoc
JAL-1588 check Chimera session file still exists
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2015-01-08
gmungoc
JAL-1588 part work save/restore of Chimera session
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2015-01-08
Jim Procter
Merge branch 'JAL-1483_29dev' into develop
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2015-01-07
Jim Procter
Merge branch 'develop' into JAL-1483_29dev
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2015-01-07
Jim Procter
JAL-1483 patches to make test case pass: hamming distan...
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2015-01-07
Jim Procter
JAL-1483 basic test of sequence similarity score model...
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