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jalview.git
2017-11-15
gmungoc
JAL-2835 take all CSQ fields; catch invalid field match...
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2017-11-15
gmungoc
JAL-2835 support filter/colour by nested attribute...
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2017-11-15
gmungoc
JAL-2835 code tidy (generic type constructors)
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2017-11-15
gmungoc
JAL-2069 dialog title now 'Variable colour'
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2017-11-15
gmungoc
JAL- 2835 support filter on nested attribute keys
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2017-11-15
gmungoc
JAL-2835 add filters for VCF/VEP 'fields of interest'
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2017-11-15
gmungoc
JAL-1270 add missing "Functional" to tests
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2017-11-15
kiramt
JAL-2831 ported to applet
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2017-11-14
kiramt
JAL-2831 tidies and tests
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2017-11-14
kiramt
JAL-2831 tidy
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2017-11-14
kiramt
Merge branch 'bug/JAL-2811' into bug/JAL-2831
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2017-11-14
kiramt
JAL-2811 Changed to overlay on via graphics context...
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2017-11-14
kiramt
JAL-2811 Missed commit
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2017-11-14
kiramt
JAL-2811 Made it work for hidden columns/seqs too
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2017-11-14
kiramt
JAL-2831 Attempt at cursor fix for wrapped mode
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2017-11-14
Jim Procter
JAL-2758 update uniprot retrieval test
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2017-11-14
kiramt
Merge branch 'bug/JAL-2811' into bug/JAL-2831
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2017-11-14
kiramt
JAL-2831 deal with hidden cols and seqs in new cursor...
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2017-11-14
kiramt
JAL-2831 Added move viewport event and set up cursor...
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2017-11-14
kiramt
Merge branch 'imp/JAL-2774' into bug/JAL-2831
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2017-11-14
gmungoc
JAL-2754 corrected merge conflict
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2017-11-13
Jim Procter
JAL-2758 release notes
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2017-11-13
Jim Procter
JAL-2698 formatting
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2017-11-13
kiramt
JAL-2811 Tidy
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2017-11-13
Jim Procter
Merge branch 'features/JAL-2758_shorteruniprot' into...
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2017-11-13
Jim Procter
JAL-2758 remove configurable behaviour - Uniprot sequen...
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2017-11-13
Jim Procter
JAL-2758 typo
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2017-11-13
gmungoc
JAL-2738 stubs for filtering VEP and VCF fields of...
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2017-11-13
kiramt
JAl-2811 Working for wrapped panels too
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2017-11-13
gmungoc
Merge branch 'develop' into features/JAL-1793VCF
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2017-11-13
gmungoc
JAL-2662 tweak README, format code
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2017-11-13
Jim Procter
JAL-2698 what's new...
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2017-11-13
kiramt
JAL-2811 Add layer for cursor in SeqCanvas
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2017-11-13
Jim Procter
JAL-2810 release notes
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2017-11-13
Jim Procter
Merge branch 'imp/JAL-2810_ftsIDtab' into develop
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2017-11-13
Jim Procter
JAL-2698 stub for 2.10.3 new known issues entries
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2017-11-13
Jim Procter
JAL-2702 groovy interpreter update and java 9 jnlp...
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2017-11-13
Jim Procter
Merge branch 'bug/JAL-2702_groovyconsoleJava9' into...
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2017-11-13
Jim Procter
JAL-2702 --illegal-access=warn for JVM launch
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2017-11-13
gmungoc
JAL-2176 removed unused Sequence.index
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2017-11-13
Jim Procter
JAL-2702 update to groovy 2.4.12
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2017-11-13
Jim Procter
JAL-2810 updated help docs for auto search checkbox...
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2017-11-13
kiramt
JAL-2784 new checks for gg==null
bug/JAL-2784
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2017-11-13
Jim Procter
JAL-2810 updated screenshots in documentation
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2017-11-13
Jim Procter
JAL-2810 auto search checkbox state stored as user...
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2017-11-13
gmungoc
JAL-2679 example accession changed to CAD01290
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2017-11-13
Jim Procter
JAL-2810 mainFramTabs -> tabs
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2017-11-13
Jim Procter
JAL-2810 simpler tooltip (assume user will work out...
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2017-11-13
kiramt
JAL-2759 convert findColumnPosition to use cursor
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2017-11-13
kiramt
JAL-2759 Converted getHiddenBoundaryLeft/Right to use...
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2017-11-10
Jim Procter
JAL-2828 allow CalcId to match on String equivalence...
doc/JAL-2494_JAL-2828_mergefindAnnotation
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2017-11-10
Jim Procter
JAL-2828 refactored duplicate code for searching lists...
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2017-11-10
gmungoc
JAL-2829 fixes and unit tests
bug/JAL-2829deleteCharsWithGaps
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2017-11-10
gmungoc
JAL-2562 updated findPosition javadoc to match behaviour
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2017-11-10
gmungoc
JAL-2829 unit tests for failing cases
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2017-11-10
kiramt
JAL-2827 related fixes for stem and non-canonical annot...
bug/JAL-2827
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2017-11-10
gmungoc
Merge branch 'develop' into features/JAL-1793VCF
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2017-11-09
kiramt
JAL-2827 Fix notched repaint of helix annotation when...
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2017-11-09
kiramt
JAL-2759 make bounds correct for left scrolling with...
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2017-11-08
Jim Procter
Merge branch 'bug/JAL-2742' into develop
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2017-11-08
Jim Procter
Revert "JAL-2742 release notes - pending confirmation...
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2017-11-08
Jim Procter
JAL-2225 release note
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2017-11-08
Jim Procter
Merge branch 'bug/JAL-2225mapMultipleChains' into develop
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2017-11-08
kiramt
Merge branch 'develop' into feature/JAL-2759
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2017-11-08
gmungoc
JAL-2808 i18n, widget state settings
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2017-11-08
Jim Procter
Merge branch 'develop' into bug/JAL-2225mapMultipleChains
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2017-11-08
gmungoc
JAL-2069 updated spike to latest
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2017-11-08
gmungoc
JAL-2069 ensure threshline instantiated to avoid NPE
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2017-11-08
gmungoc
JAL-2069 (helper method for) italic titled borders
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2017-11-07
Jim Procter
JAL-2698 14 Nov 2017 release date for 2.10.3
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2017-11-07
Jim Procter
JAL-2775 release notes
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2017-11-07
Jim Procter
Merge branch 'imp/JAL-2775' into develop
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2017-11-07
Jim Procter
JAL-2810 i18n tab label
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2017-11-07
kiramt
JAL-2774 Added javadoc for new event parameters
imp/JAL-2774
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2017-11-07
Jim Procter
JAL-2810 ‘Close’ is now ‘Cancel’ in SequenceFetcher...
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2017-11-07
Jim Procter
JAL-2810 working back button shown for bulk ID retrieva...
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2017-11-07
kiramt
JAL-2774 Fix fastpaint of wrapped alignment
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2017-11-07
kiramt
JAL-2821 refactored drawPartialGroupOutline
bug/JAL-2821
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2017-11-07
gmungoc
JAL-2069 update spike to latest (no value colour options)
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2017-11-07
gmungoc
JAL-2069 choice of no / min / max colour if 'no attribu...
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2017-11-07
Jim Procter
JAL-2810 bulk fetch for PDB IDs
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2017-11-07
Jim Procter
JAL-2804 clearer tooltip for autosearch checkbox
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2017-11-07
gmungoc
JAL-2069 update spike with latest
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2017-11-07
gmungoc
JAL-2069 corrected overloaded constructor behaviour
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2017-11-07
gmungoc
JAL-2069 update spike branch with latest
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2017-11-07
gmungoc
Merge branch 'develop' into features/JAL-1793VCF
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2017-11-07
gmungoc
JAL-2069 add 'by attribute' options to graduated featur...
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2017-11-07
gmungoc
JAL-2069 add attributeName and noValueColour to Feature...
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2017-11-07
gmungoc
JAL-2816 tweaks to feature visibility checks
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2017-11-07
gmungoc
JAL-2808 tweak to use Iterable for set of matchers
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2017-11-07
gmungoc
JAL-2069 JAL-2808 utility method to build combobox...
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2017-11-07
gmungoc
JAL-2820 limit length of residue tooltip
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2017-11-06
gmungoc
JAL-2069 cache colours generated from labels
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2017-11-06
gmungoc
JAL-2820 include attribute value used for feature colou...
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2017-11-06
Jim Procter
JAL-2756 release notes
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2017-11-06
gmungoc
JAL-2808 small tweak to getString to quote the pattern...
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2017-11-06
Jim Procter
Merge branch 'bug/JAL-2756sequenceidmessage' into develop
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2017-11-06
kiramt
JAL-2759 fix getHiddenOffset iterating backwards
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2017-11-06
kiramt
JAL-2778 replace setScrollValues call in AlignmentPanel...
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2017-11-06
kiramt
JAL-2778 tidy
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