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jalview.git
2012-10-24 jprocterJAL-1193 patch prevents JalviewJmolBinding from handlin... commit | commitdiff | tree | snapshot
2012-10-22 jprocterJalview 2.8 Source Header commit | commitdiff | tree | snapshot
2012-10-04 jprocterMerge branch 'develop' into Release_2_8_Branch commit | commitdiff | tree | snapshot
2012-10-04 jprocterJAL-636 switch to simple REST interface to dbfetch... commit | commitdiff | tree | snapshot
2012-10-04 jprocteravoid importing the mapping every time we parse a unipr... commit | commitdiff | tree | snapshot
2012-10-04 jprocterJAL-636 tweak main() based test to allow DAS sources... commit | commitdiff | tree | snapshot
2012-10-04 jprocterJAL-1188 - set the user agent to Jalview Desktop/$... commit | commitdiff | tree | snapshot
2012-10-04 jprocterJAL-1064 JAL-671 make sure all buttons are disabled... commit | commitdiff | tree | snapshot
2012-10-03 jprocterformatting commit | commitdiff | tree | snapshot
2012-10-03 jprocterupdate release branch to v2.8 commit | commitdiff | tree | snapshot
2012-10-03 jprocterformatting commit | commitdiff | tree | snapshot
2012-10-03 jprocterJAL-1026 - insert a sensible default for proxy so Jalvi... commit | commitdiff | tree | snapshot
2012-10-03 jprocterJAL-1183 JAL-343 - use dialog queue for JABA warning... commit | commitdiff | tree | snapshot
2012-10-02 jprocterJAL-1185 patch NPE - create new group for subtree on... commit | commitdiff | tree | snapshot
2012-10-01 jprocterJAL-1130 JAL-1137 messy hardcoding of author list to... commit | commitdiff | tree | snapshot
2012-10-01 jprocterJAL-1130 JAL-1139 hardcode preferred height to logo... commit | commitdiff | tree | snapshot
2012-10-01 jprocterJAL-1130 more robust loading code and different logos... commit | commitdiff | tree | snapshot
2012-10-01 jprocterJAL-1183 dialog thread is only started after the splash... commit | commitdiff | tree | snapshot
2012-10-01 jprocterJAL-1111 dialog flickers whilst example file starts... commit | commitdiff | tree | snapshot
2012-10-01 jprocterJAL-1184 apparent deadlock when launching jalview on... commit | commitdiff | tree | snapshot
2012-10-01 jprocterJAL-1183 showNews adds news discovery and display threa... commit | commitdiff | tree | snapshot
2012-10-01 jprocterJAL-1183 use dialog queue for usage statistics prompt commit | commitdiff | tree | snapshot
2012-10-01 jprocterJAL-1183 dialog queue commit | commitdiff | tree | snapshot
2012-09-27 jprocterJAL-1030 patch typo commit | commitdiff | tree | snapshot
2012-09-27 jprocterJAL-1179 - regression from JAL-1030 patch implicitly... commit | commitdiff | tree | snapshot
2012-09-25 jprocterJAL-1031 allow empty selections to pass through to... commit | commitdiff | tree | snapshot
2012-09-25 jprocterJAL-1179 note and patch for exceptions raised when... commit | commitdiff | tree | snapshot
2012-09-25 jprocterJAL-1031 JAL-1032 if selection is non-null but empty... commit | commitdiff | tree | snapshot
2012-09-25 jprocterJAL-1010 write validated value back to text field to... commit | commitdiff | tree | snapshot
2012-09-25 jprocterJAL-970 JAL-1052 (comment about JAL-1140) commit | commitdiff | tree | snapshot
2012-09-25 jprocterJAL-970 document interactive RNA secondary structure... commit | commitdiff | tree | snapshot
2012-09-25 jprocterJAL-1173 - trap redraw buffer OOM errors. needs a test... commit | commitdiff | tree | snapshot
2012-09-25 jprocterJAL-1173 try to catch OOMs when loading annotation... commit | commitdiff | tree | snapshot
2012-09-25 jprocterJAL-1076 add note in documentation about Alt rather... commit | commitdiff | tree | snapshot
2012-09-24 jprocterJAL-1130 transparent big version for JNLP and file... commit | commitdiff | tree | snapshot
2012-09-24 jprocterJAL-958 revised applet parameter documentation to stand... commit | commitdiff | tree | snapshot
2012-09-24 jprocterformatting commit | commitdiff | tree | snapshot
2012-09-24 jprocterJAL-958 normalise logo menu options in applet commit | commitdiff | tree | snapshot
2012-09-24 jprocterJAL-958 enable logo display when normalise option selected commit | commitdiff | tree | snapshot
2012-09-24 jprocterJAL-516 JAL-759 JAL-1066 group & group colourscheme... commit | commitdiff | tree | snapshot
2012-09-24 jprocteronly recalc group conservation after last sequence... commit | commitdiff | tree | snapshot
2012-09-24 jprocterJAL-516 JAL-759 JAL-1066 group & group colourscheme... commit | commitdiff | tree | snapshot
2012-09-24 jprocterJAL-958 JAL-966 refactor group/alignment associated... commit | commitdiff | tree | snapshot
2012-09-24 jprocterJAL-1130 remove lossy logo versions commit | commitdiff | tree | snapshot
2012-09-21 jprocterMerge branch 'JAL-1130' into develop commit | commitdiff | tree | snapshot
2012-09-21 jprocterJAL-849 try harder and wait for longer for JABAWS to... commit | commitdiff | tree | snapshot
2012-09-21 jprocterJAL-1171 refactor code to allow gui update for global... commit | commitdiff | tree | snapshot
2012-09-21 jprocterJAL-1165 visual delay whilst results are processed. commit | commitdiff | tree | snapshot
2012-09-21 jprocterJAL-1165 allow progress indicators on the web service... commit | commitdiff | tree | snapshot
2012-09-21 jprocterJAL-1130 jalview spinning icon for web service dialog commit | commitdiff | tree | snapshot
2012-09-21 jprocterJAL-1130 splashscreen logo commit | commitdiff | tree | snapshot
2012-09-19 jprocterJAL-1130 new logo in help, splash screen and web servic... commit | commitdiff | tree | snapshot
2012-09-19 jprocterJAL-1130 new logo spinner in webservices status window commit | commitdiff | tree | snapshot
2012-09-19 jprocterJAL-1130 large logo commit | commitdiff | tree | snapshot
2012-09-19 jprocterJAL-1130 small rotating logo commit | commitdiff | tree | snapshot
2012-09-19 jprocterJAL-1130 made SplashScreen able to be a dialog that... commit | commitdiff | tree | snapshot
2012-09-19 jprocterJAL-1130 refactored standard hyperlink handler code... commit | commitdiff | tree | snapshot
2012-09-19 jprocterJAL-1130 trial view of new logo on splashscreen. commit | commitdiff | tree | snapshot
2012-09-19 jprocterJAL-1170 column and row positions confused in implement... commit | commitdiff | tree | snapshot
2012-09-07 jproctertodos commit | commitdiff | tree | snapshot
2012-09-06 jprocterJAL-1065 documentation and image commit | commitdiff | tree | snapshot
2012-09-06 jprocterJAL-958 commit | commitdiff | tree | snapshot
2012-09-06 jprocterJAL-842 documentation commit | commitdiff | tree | snapshot
2012-09-06 jprocter2.7.1 squashed commit | commitdiff | tree | snapshot
2012-09-06 jproctertypo commit | commitdiff | tree | snapshot
2012-09-06 jprocterJAL-1065 whats new entry for tcoffee scores commit | commitdiff | tree | snapshot
2012-09-06 jprocterfix image link commit | commitdiff | tree | snapshot
2012-09-06 jprocterJAL-958 documented logo menu items commit | commitdiff | tree | snapshot
2012-09-06 jproctermerge new 2.7.1 and 2.8 features into one commit | commitdiff | tree | snapshot
2012-09-06 jproctertypo commit | commitdiff | tree | snapshot
2012-09-06 jprocterJAL-958 flag indicating if visualization settings for... commit | commitdiff | tree | snapshot
2012-09-06 jprocterJAL-958 store/recover normalised flag commit | commitdiff | tree | snapshot
2012-09-06 jprocterJAL-958 store normalised flag in jalview project commit | commitdiff | tree | snapshot
2012-09-06 jprocterPCA what's new and score matrix documentation page commit | commitdiff | tree | snapshot
2012-09-06 jprocterJAL-1013 JAL-1167 JAL-1121 JAL-1125 commit | commitdiff | tree | snapshot
2012-09-06 jprocterJAL-1027 JAL-1167 documentation and patched DNA/RNA... commit | commitdiff | tree | snapshot
2012-09-06 jprocterJAL-1013 - employ index parameter rather than hardcode... commit | commitdiff | tree | snapshot
2012-09-06 jprocterJAL-1167 method and simple tests for printing score... commit | commitdiff | tree | snapshot
2012-09-05 jprocterJAL-979 tidy up shmmr hardcoded WS definition commit | commitdiff | tree | snapshot
2012-09-05 jprocterJAL-1136 give pre-existing custom settings a special... commit | commitdiff | tree | snapshot
2012-09-05 jprocterformatting commit | commitdiff | tree | snapshot
2012-09-05 jprocterpatch for NPE when no services are available to resolve... commit | commitdiff | tree | snapshot
2012-09-05 jprocterJAL-975 null any existing preset if user has supplied... commit | commitdiff | tree | snapshot
2012-09-05 jprocterJAL-1162 catch security exception and just use bare... commit | commitdiff | tree | snapshot
2012-09-05 jprocterJAL-994 fix when sequence is too short and no jobs run commit | commitdiff | tree | snapshot
2012-09-05 jprocterJAL-1111 allow news reader window to be moved even... commit | commitdiff | tree | snapshot
2012-09-05 jprocterJAL-976 fix AACon name typo in source and GUI commit | commitdiff | tree | snapshot
2012-09-04 jproctertypo commit | commitdiff | tree | snapshot
2012-09-04 jprocterJAL-976 documentation for disorder, AACon, ClustalO... commit | commitdiff | tree | snapshot
2012-09-04 jprocterJAL-975 note about black colouring bug commit | commitdiff | tree | snapshot
2012-09-04 jprocterJAL-1066 documentation for per-sequence annotation... commit | commitdiff | tree | snapshot
2012-09-04 jprocterJAL-1060 new dialog box image commit | commitdiff | tree | snapshot
2012-09-04 jprocterJAL-1060 documentation for new layout commit | commitdiff | tree | snapshot
2012-09-04 jprocteroff by one for sequence associated annotation commit | commitdiff | tree | snapshot
2012-09-04 jprocterunused variable commit | commitdiff | tree | snapshot
2012-09-04 jprocterJAL-974 JRonn thresholds commit | commitdiff | tree | snapshot
2012-09-03 jprocterJAL-591 adapt option layout to width of dialog box commit | commitdiff | tree | snapshot
2012-09-03 jprocterJAL-975 JAL-974 JAL-976 always adjust height after... commit | commitdiff | tree | snapshot
2012-09-03 jprocterJAL-974 show thresholds for disorder predictor annotati... commit | commitdiff | tree | snapshot
2012-09-03 jprocterJAL-1153 ensure _linecolour is copied in copy constructor commit | commitdiff | tree | snapshot
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