jalview.git
2011-09-16 jprocterfix for JAL-895 - new exampleFile_2_7.jar and logic...
2011-09-16 jprocternumerically ataxic comments.
2011-09-16 jprocterJAL-574 added option to enable/disable 'follow selectio...
2011-09-16 jprocterJAL-940 - removed legacy service options from preferenc...
2011-09-16 jprocterJAL-468 typo and label length in dialog
2011-09-16 jprocterpatch for JAL-935 - warning messages raised when alignm...
2011-09-16 jprocterJAL-468 JAL-936 sort alignment by tree and autosort...
2011-09-16 jproctertweak english
2011-09-15 jprocterdocumentation for new preferences (JAL-234 and web...
2011-09-15 jprocterdocumentation for JAL-234
2011-09-15 jprocterJAL-860 fixed grammar for one structure vs many structu...
2011-09-15 jprocterJAL-854 tweaked menu layout so services appear before...
2011-09-14 jproctertypo
2011-09-14 jprocterJAL-234 - default button to reset min/max colours and...
2011-09-14 jprocterJAL-934 - refactor to use label font functions
2011-09-14 jprocterJAL-934 - refactor to use label font functions
2011-09-14 jprocterJAL-934 - standard label font functions
2011-09-14 jprocterJAL-931 (related) - utility to split an alignment datab...
2011-09-14 jprocterJAL-931 - groovy test harness code.
2011-09-14 jproctertest data for JAL-701
2011-09-14 jprocterpatch for NPE (not clear if NPE is evidence of deeper...
2011-09-14 jprocterJAL-766 JAL-733 - new alignment->jmol associations...
2011-09-14 jprocterJAL-766 JAL-733 - new alignment->jmol associations...
2011-09-14 jprocterfix for JAL-930
2011-09-14 jprocterJAL-766 JAL-733 - new alignment->jmol associations...
2011-09-12 jprocterJAL-927 ensure api method calls that affect GUI state...
2011-09-05 jprocternote about ensuring callers of loadAlignment(..) save...
2011-08-30 jprocterpatch for JAL-731
2011-08-30 jprocterpatch for JAL-729 - NPE avoided and cut and paste impor...
2011-08-30 jprocterJAL-915 - ensured that exceptions are not raised in...
2011-08-30 jprocterfix for JAL-917 - ensure all sequence strings are made...
2011-08-30 jprocterfix for JAL-917 - ensure all sequence strings are made...
2011-08-30 jprocterJAL-715 - conditional to hide the RSBS service editing...
2011-08-30 jprocterJAL-715 rsbs service editing
2011-08-30 jprocterJAL-715 JalviewDialog for RSBS service editing pane
2011-08-30 jprocterJAL-715 store/reset .jalview_properties setting for...
2011-08-30 jprocterJAL-715 serialise and deserialise multiple rest client...
2011-08-30 jprocterJAL-715 - notify user of parsing problems for results...
2011-08-30 jprocterretrieve URL for datasource of packed set
2011-08-30 jprocterensure parsing errors and 'lack of data' errors are...
2011-08-30 jprocterJAL-715 need to URLencode constant values when serializ...
2011-08-29 jprocterJAL-715 - grammar for warning message.
2011-08-29 jprocteradded notes on third party library licencing and update...
2011-08-29 jprocterJAL-919, JAL-715 - prototype service editing dialog...
2011-08-29 jprocterJAL-633, JAL-591 - refactored ArgumentI.getValue from...
2011-08-29 jprocterrefactored popup dialog boilerplate code to own class
2011-08-29 jprocterJAL-633 simple concrete parameter and option objects...
2011-08-29 jprocterJAL-633, JAL-591 - refactored ArgumentI.getValue from...
2011-08-25 jprocterconstructor only needs GUI container interface
2011-08-25 jprocterJAL-591 - refactored web service parameter dialog to...
2011-08-25 jprocterJAL-715 - better validation logic
2011-08-25 jprocterdebug dialog
2011-08-25 jprocterJAL-715 - prevent empty elements being generated
2011-08-24 jprocterJAL-715 dialog for interactively editing a new or exist...
2011-08-24 jprocternew Swing and SWT capable form layout manager - miglayout
2011-08-24 jprocterJAL-715 bugfixes and refactor of parsing code for use...
2011-08-24 jprocterrefactor labelled button creator to JvSwingUtils
2011-08-23 jprocterJAL-715 - simple tests and functions for IO of service...
2011-08-23 jprocterJAL-715 - allow rest service attributes to be exported...
2011-08-19 jprocterJAL-908 JAL-912 JAL-516 documented annotation HTML...
2011-08-19 jprocterJAL-908,JAL-701 - patch applet to strip HTML tags from...
2011-08-19 jprocterJAL-908 JAL-701 refactored HTML escape/unescape code...
2011-08-18 jproctertestdata for JAL-701 and JAL-908
2011-08-18 jprocterremove debug message
2011-08-18 jprocterfix for JAL-701 - ensure '<' appears in tooltip in...
2011-08-18 jprocterminor efficiency refactor
2011-08-18 jprocterJAL-907 testdata for JAL-701
2011-08-18 jprocterJAL-907 - test data directory readme
2011-08-17 jprocterJAL-853 use service action attribute to index services...
2011-08-17 jprocterremove any trailing '/' from the URL before validation...
2011-08-17 jprocteravoid NPE race condition when several threads waiting...
2011-08-17 jprocterfix for JAL-888
2011-08-17 jprocterfix for JAL-888
2011-08-17 jprocterJAL-898 - ensure we only remove a clargs progress bar...
2011-08-17 jprocterJAL-813 fix - check whether conservation is applied...
2011-08-17 jprocterJAL-867 - rejigged layout to a single splitpane wide...
2011-08-15 jprocterJAL-750 automaticScrolling is true by default
2011-08-15 jprocterJAL-750 - automaticScrolling=true by default. Refactore...
2011-08-15 jprocterJAL-747 - warning dialog if Jalview can't resolve filen...
2011-08-15 jprocterJAL-904 added scrollToRow and scrollToColumn methods...
2011-08-05 jprocterexample script that will submit a muscle jabaws job...
2011-08-05 jprocterfetch groovy script from URL (JAL-899) and show progres...
2011-08-05 jprocterallow several progress bars on the desktop window ...
2011-08-03 jprocterMerge branch 'master' of https://source.jalview.org...
2011-08-03 jprocterrefactored resolvetocodebase code and reused for resour...
2011-08-03 jprocterrefactored resolvetocodebase code and reused for resour...
2011-08-03 jprocterfix NPE when applets stop. seems to make the simple...
2011-08-03 jprocterrefactor schema to group swing window geometry attributes
2011-07-28 jprocterrefer to local default setting for proxy when connecting to
2011-07-28 jprocteradded 'since 2.x notes to parameters'. User configurabl...
2011-07-26 jprocterexample alignment for JAL-862 - removed signal peptides
2011-07-25 jprocteruse proper encoding for storing colour as user preferen...
2011-07-22 jproctertodo for JAL-860 - associate multiple sequences with...
2011-07-22 jprocterapplet min/max annotation shading parameter documentati...
2011-07-22 jprocterensure propagation of colour change on annotation updat...
2011-07-22 jprocterfix NPE when annotation colourgradient is applied
2011-07-22 jproctercode style
2011-07-22 jprocterdefault parameter for colours in annotation shading...
2011-07-22 jproctermethod to get a user default colour (JAL-234)
2011-07-21 jprocterretrieve all sequences matching a particular name ...
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