jalview.git
2015-10-05 tcofoegbuJAL-1912 added null check for SequenceMapping variable...
2015-10-05 tcofoegbuJAL-1912 updated AnnotationDisplaySettingPojo
2015-10-01 tcofoegbuJAL-1912 Double.NaN breaks JSON serialization - added...
2015-10-01 tcofoegbuJAL-1912 refactor annotation refsequence assignemnt...
2015-09-30 tcofoegbuJAL-1912 added support of tcoffee annotation and other...
2015-09-30 tcofoegbumerge
2015-09-30 tcofoegbuJAL-1852 disable querying of unpublished PDB entries...
2015-09-30 Jim Procterfix for JAL-1883
2015-09-29 tcofoegbuJAL-1896 fixed NPE for RNA Helice without equivalent...
2015-09-28 tcofoegbumerge
2015-09-28 tcofoegbuJAL-1896 revised implementation to construct a ColourSc...
2015-09-28 gmungocJAL-1909 repaint complementary alignment panel after...
2015-09-25 gmungocJAL-1859 try hoverDelay of 0.1s in Jmol for more respon...
2015-09-25 tcofoegbumerge
2015-09-25 tcofoegbuJAL-1907 bugfix for NPE while parsing a features file
2015-09-25 gmungocJAL-1815 restore split frame geometry correctly includi...
2015-09-25 tcofoegbumerge
2015-09-25 tcofoegbuJAL-1860 disabled default enter behaviour on pdb search...
2015-09-24 gmungocJAL-1905 parse url including & correctly
2015-09-24 gmungocJAL-1904 parse feature file colours on to alignment...
2015-09-24 tcofoegbuJAL-1860 only allow enter key when valid selection...
2015-09-24 tcofoegbuJAL-1860 keyboard operation of pdb sequence fetcher...
2015-09-24 tcofoegbumerge
2015-09-24 tcofoegbuJAL-1896 bugfix to enabled Jalview restore clustal...
2015-09-22 Jim ProcterMerge branch 'develop' of source.jalview.org/git/jalvie...
2015-09-22 Jim ProcterJAL-1894 update RELEASE for 2.9.0b1 release
2015-09-22 gmungocJAL-1894 release notes updated
2015-09-22 gmungocJAL-1424 tidied output
2015-09-22 gmungocMerge branch 'develop' of https://source.jalview.org...
2015-09-22 tcofoegbuJAL-1774 house keeping
2015-09-22 gmungocJAL-1859 adding "set hoverDelay 0.001;" to Jmol startup...
2015-09-21 tcofoegbumerge
2015-09-21 tcofoegbuJAL-1774 modifed warning dialog to use JVDialog rather...
2015-09-21 gmungocJAL-1892 duplicate entry removed
2015-09-21 gmungocJAL-1799 update height of annotation labels to match...
2015-09-21 gmungocJAL-1892 Spanish additions for Jalview 2.9
2015-09-21 gmungocJAL-1152 set initial state of show alignment/sequence...
2015-09-21 gmungocJAL-1152 small change to match revised annotation sorti...
2015-09-21 gmungocJAL-1619 obsolete help removed
2015-09-18 gmungocJAL-1270 disable test as not really a test and goes...
2015-09-18 gmungocMerge branch 'develop' of https://source.jalview.org...
2015-09-18 gmungocJAL-1805 typo corrected
2015-09-18 Jim ProcterJAL-1889 wrong clean for buildTest!
2015-09-18 Jim ProcterJAL-1270 JAL-1889 move the stevesoft test back into...
2015-09-18 gmungocJAL-1788 typos corrected
2015-09-18 gmungocJAL-1788 broken href fixed
2015-09-18 Jim ProcterJAL-1889 remove non-UTF8 characters so we can build...
2015-09-18 tcofoegbuJAL-1774 JAL-1506 revised implementaion for clear highl...
2015-09-18 tcofoegbumerge
2015-09-18 tcofoegbuJAL-1506 revised implementation to clear only selected...
2015-09-18 Jim ProcterJAL-1888 updated documentation for unit testing in...
2015-09-18 Jim ProcterJAL-1888 set verbosity and exclude the 'parallel' attri...
2015-09-18 gmungocJAL-1859 reinstated full path to file option (for local...
2015-09-18 Jim ProcterJAL-1888 JAL-1551 format XML file (2 spaces, no tabs...
2015-09-18 Jim ProcterJAL-1888 compile tests to separate directory and pass...
2015-09-18 Jim ProcterJAL-1888 documentation for testing target
2015-09-18 Jim ProcterJAL-1888 property to specify which testng groups should...
2015-09-18 gmungocJAL-1424 Ant task to report missing language bundle...
2015-09-17 tcofoegbuJAL-1774 bugfix for misleading message after trying...
2015-09-16 tcofoegbumerge
2015-09-16 tcofoegbuJAL-1486 off-by-one error bugfix
2015-09-16 Jim ProcterMerge branch 'JAL-1612_JAL-1439_JAL-1845_osx_icons_sign...
2015-09-16 Jim ProcterJAL-1612 JAL-1439 JAL-1845 OSX Installers set Xdock...
2015-09-16 gmungocJAL-1882 variable renamed to avoid confusion with membe...
2015-09-16 gmungocMerge branch 'develop' of https://source.jalview.org...
2015-09-16 gmungocJAL-1885 small fix to isVersionStringLaterThan plus...
2015-09-16 tcofoegbumerge
2015-09-16 tcofoegbuJAL-1881 Bugfix for annotation import from BioJS
2015-09-16 gmungocJAL-1684 typo correction
2015-09-16 gmungocJAL-1859 removed temporary test copy of pdb file
2015-09-16 gmungocJAL-1859 refactor duplicated code to new HttpUtils...
2015-09-16 gmungocJAL-1859 code tidy, remove 'absolute URL' option
2015-09-16 gmungocJAL-1859 working variable to aid inspection in debugger
2015-09-16 gmungocJAL-1859 try 1gaq.txt in /lang so it is in the built jar
2015-09-16 gmungocJAL-1859 debug logging removed
2015-09-16 gmungocJAL-1859 revert to resolving full path to PDB file
2015-09-16 gmungocJAL-1859 refactor addProtocol, setProtocolState as...
2015-09-16 gmungocJAL-1859 temporary debug output
2015-09-15 gmungocJAL-1859 use unresolved PDB filename
2015-09-15 gmungocJAL-1859 strip file name from applet documentbase
2015-09-15 gmungocJAL-1859 refactoring / debugging added
2015-09-14 gmungocJAL-1865 fixed so initial state of annotation sort...
2015-09-14 gmungocJAL-1851 add retrieved sequence's start (-1) to match...
2015-09-14 gmungocJAL-1880 updated mapping tests to ensure they handle...
2015-09-14 gmungocJAL-1270 test added for separatorListToArray
2015-09-14 gmungocJAL-1880 handle sequence offsets properly when mapping...
2015-09-14 gmungocJAL-1684 align added alignment to match original in...
2015-09-14 gmungocJAL-1684 align added alignment to match original in...
2015-09-14 gmungocJAL-1684 ensure cDNA placed above protein in SplitFrame
2015-09-11 Jim ProcterJAL-1884 add the JNLP template to jalview_jnlp_vm.jar
2015-09-10 Jim ProcterJAL-1645 fix broken link in docs
2015-09-10 Jim ProcterJAL-1645 reformat help html - 2 spaces indents, no...
2015-09-10 Jim ProcterJAL-1645 licencing for help html
2015-09-10 Jim ProcterJAL-1645 licencing for doc directory files
2015-09-10 Jim ProcterJAL-1645 licencing for groovy files
2015-09-10 Jim ProcterJAL-1645 licencing for new files in test and utils
2015-09-10 Jim ProcterJAL-1645 licencing for new files in src
2015-09-10 Jim ProcterJAL-1645 source formatting and organise imports
2015-09-10 Jim ProcterJAL-1645 source formatting and organise imports
2015-09-10 Jim ProcterJAL-1684 updated example to just a fragment of the...
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