build.xml

   1 <?xml version="1.0"?>
   2   <project name="jalviewX" default="build" basedir=".">
   3     <!-- utils is a class path to additional utilities needed for
   4     building docs, jars and webstart stuff -->
   5
   6
   7
   8     <target name="init">
   9       <path id="axis.classpath">
  10 <!-->        <fileset dir="/usr/local/axis/lib">
  11           <include name="**/*.jar" />
  12         </fileset>
  13         <fileset dir="/usr/local/jakarta-tomcat-5/webapps/axis/WEB-INF/lib">
  14           <include name="**/*.jar"/>
  15           <include name="*.jar"/>
  16         </fileset> -->
  17       </path>
  18
  19       <property name="libDir" value="lib"/>
  20       <property name="resourceDir" value="resources"/>
  21       <property name="helpDir" value="help"/>
  22       <property name="docDir" value="doc"/>
  23       <property name="sourceDir" value="src" />
  24       <property name="outputDir" value="classes" />
  25       <property name="packageDir" value="dist" />
  26       <property name="outputJar" value="jalview.jar" />
  27       <property name="wsdl.File" value="http://anaplog.compbio.dundee.ac.uk:8080/axis/services/jpred?wsdl" />
  28         <property name="WebStartLocation" value="http://www.compbio.dundee.ac.uk/~jimp/public_html/jalviewtest/"/>
  29       <property name="wsdl.Namespace" value="vamsas" />
  30       <property name="wsdl.ClientNS" value="ext.vamsas" />
  31
  32       <path id="build.classpath">
  33         <fileset dir="utils">
  34           <include name="*.jar"/>
  35           <include name="**/*.jar"/>
  36         </fileset>
  37         <fileset dir="${libDir}">
  38           <include name="*.jar"/>
  39           <include name="**/*.jar"/>
  40         </fileset>
  41 <!--        <fileset dir="old_lib_signed">
  42 <include name="lib_axis.jar"/>
  43
  44         </fileset>-->
  45       </path>
  46       <!-->    <uptodate property="help.uptodate"
  47       targetfile="${helpDir}/helpIndex.xml">
  48       <srcfiles
  49                  dir="${helpDir}"
  50                  includes="**/*.html" />
  51                </uptodate>
  52       -->
  53     </target>
  54
  55     <target name="clean" depends="init">
  56       <!-- not efficient yet. -->
  57       <delete dir="${outputDir}"/>
  58     </target>
  59
  60     <target name="distclean" depends="init, clean">
  61
  62       <echo message="REMOVING ALL BACKUP/AUTOSAVES!"/>
  63       <delete>
  64         <fileset dir=".">
  65           <include name="${outputJar}"/>
  66           <include name="#*#"/>
  67           <include name="#*.*#"/>
  68           <include name="**/#*#"/>
  69           <include name="**/#*.*#"/>
  70           <include name="*~"/>
  71           <include name="*.*~"/>
  72           <include name="**/*~"/>
  73           <include name="**/*.*~"/>
  74         </fileset>
  75       </delete>
  76     </target>
  77
  78     <target name="prepare" depends="init">
  79       <mkdir dir="${outputDir}"/>
  80       <copy todir="${outputDir}">
  81         <fileset dir=".">
  82
  83           <include name="${docDir}/**/*.*"/>
  84           <include name="${helpDir}/**/*.*"/>
  85           <include name="${libDir}/*.*"/>
  86         </fileset>
  87         <fileset dir="${resourceDir}">
  88           <include name="**/*.*"/>
  89         </fileset>
  90       </copy>
  91     </target>
  92
  93     <target name="build" depends="prepare">
  94       <!-- not efficient yet. -->
  95       <javac source="1.4" target="1.4" srcdir="${sourceDir}" destdir="${outputDir}"
  96       classpathref="build.classpath" />
  97     </target>
  98     <target name="buildindices" depends="init, prepare"
  99     unless="help.uptodate">
 100     <java
 101       classname="com.sun.java.help.search.Indexer"
 102       classpathref="build.classpath"
 103       fork="true"
 104       dir="${outputDir}/${helpDir}"
 105       >
 106       <arg line="html"/>
 107     </java>
 108     </target>
 109
 110     <target name="makejars" depends="build, buildindices">
 111       <!-- make the package jar -->
 112       <mkdir dir="${packageDir}"/>
 113
 114       <jar destfile="${packageDir}/${outputJar}">
 115         <fileset dir="${outputDir}">
 116           <exclude name="*.jar" />
 117         </fileset>
 118       </jar>
 119
 120       <copy toDir="${packageDir}" flatten="true">
 121         <fileset dir="${outputDir}">
 122           <include name="*.jar"/>
 123           <include name="**/*.jar"/>
 124         </fileset>
 125       </copy>
 126
 127       <signjar
 128       storepass="alignmentisfun"
 129       keypass="alignmentisfun"
 130       keystore="keys/.keystore"
 131       alias="jalview"
 132       lazy="false"
 133       verbose="false"
 134       >
 135
 136       <fileset dir="${packageDir}">
 137         <include name="*.jar"/>
 138       </fileset>
 139       </signjar>
 140       <taskdef classpathref="build.classpath" resource="com/roxes/tools/ant/taskdefs.properties"/>
 141
 142       <!--    codebase="http://www.jalview.org/jalview/webstart" -->
 143       <jnlp toFile="${packageDir}/Jalview.jnlp" href="Jalview.jnlp"
 144       codebase="${WebStartLocation}">
 145       <information>
 146         <title>Jalview</title>
 147         <vendor>M Clamp</vendor>
 148         <homepage href="www.jalview.org"/>
 149         <description>Jalview Multiple Alignment Editor</description>
 150         <description kind="short">Jalview</description>
 151         <icon href="BartonGroupBanner.gif"/>
 152       </information>
 153         <resources>
 154           <j2se version="1.3+"/>
 155           <fileset dir="${packageDir}">
 156             <include name="jalview.jar"/>
 157           </fileset>
 158           <fileset dir="${packageDir}">
 159             <include name="*.jar"/>
 160             <exclude name="jalview.jar"/>
 161           </fileset>
 162         </resources>
 163         <application_desc main_class="jalview.bin.Jalview">
 164           <argument>http://www.compbio.dundee.ac.uk/~andrew/jalview/glut.msf</argument>
 165         </application_desc>
 166         <security>
 167           <all_permissions/>
 168         </security>
 169       </jnlp>
 170     </target>
 171     <target name="runenv" depends="init">
 172       <path id="run.classpath">
 173         <pathelement location="${outputDir}"/>
 174         <fileset dir="${outputDir}">
 175           <include name="${libDir}/*.jar"/>
 176         </fileset>
 177       </path>
 178       <pathconvert targetos="unix" refid="run.classpath" property="run.classpath"/>
 179
 180       <echo>java -classpath ${run.classpath} jalview.bin.Jalview
 181       </echo>
 182     </target>
 183
 184     <target name="buildextclients" depends="init">
 185       <path id="axisbuild">
 186         <!--        <path refid="axis.classpath"/> -->
 187         <path refid="build.classpath"/>
 188       </path>
 189       <taskdef resource="axis-tasks.properties" classpathref="axisbuild"/>
 190       <move todir="./bak">
 191         <fileset dir="${sourceDir}" id="client">
 192           <include name="${wsdl.ClientNS}/*.*"/>
 193         </fileset>
 194       </move>
 195
 196       <axis-wsdl2java
 197       output="${sourceDir}"
 198       verbose="true"
 199       url="${wsdl.File}"
 200       serverside="false"
 201       deployscope="Request"
 202       debug="false"
 203       >
 204       <mappingSet>
 205         <mapping
 206         namespace="${wsdl.Namespace}"
 207         package="${wsdl.ClientNS}"
 208         />
 209         <mapping namespace="http://dataTypes.vamsas"
 210         package="${wsdl.ClientNS}"/>
 211         </mappingSet>
 212     </axis-wsdl2java>
 213
 214   </target>
 215   <target name="package" depends="init, build">
 216
 217   </target>
 218 </project>