JAL-2375 JAL-2376 First commit of implementation for Phyre2 result browsing, template...
[jalview.git] / examples / testdata / phyre2results / 56da5616b4559c93 / aligs / c2mj3A_.34.alig.html
1 <html><head>
2 <title>Phyre 2 alignment of FER_CAPAN_1-144 with c2mj3A_</title>
3 <style id="style1" type="text/css">      .notIpad{display:inline;}    </style>
4 <link type="text/css" rel="stylesheet" href="../css/main.css">
5 <script type="text/javascript"
6 src="http://www.sbg.bio.ic.ac.uk/phyre2/html/jmol/jsmol/JSmol.min.js"></script>
7 <script type="text/javascript">
8
9 var jmolApplet0 = null;
10
11 var JSInfo = {
12   addSelectionOptions: false,
13   color: "#000000",
14   debug: false,
15   deferApplet: false,
16   memoryLimit: 512,            // Java only
17   j2sPath: "http://www.sbg.bio.ic.ac.uk/phyre2/html/jmol/jsmol/j2s",
18   // HTML5 only
19   memoryLimit: 512,            // Java only
20   readyFunction: null,
21   script: null,
22   disableInitialConsole: true,
23   disableJ2SLoadMonitor: false,
24   src: null,
25   use: "HTML5",  
26   width: 400,
27   height: 400
28 }; 
29
30 Jmol.setDocument(0);
31 Jmol.getApplet("jmolApplet0", JSInfo)
32
33 function init_jmol(){
34     var jmol_div = document.getElementById('jmol');
35     if(jmol_div.innerHTML == ""){
36         jmol_div.innerHTML = Jmol.getAppletHtml(jmolApplet0);
37         //eval the script added by jsmol to kickstart it.
38         eval(jmol_div.getElementsByTagName("script")[0].innerHTML);
39         Jmol.script(jmolApplet0, "load ../c2mj3A_.34.pdb; select all; cpk off; wireframe off; cartoon on; color group; set antialiasDisplay ON");  
40
41     }
42 }
43
44 </script>
45
46 <script type="text/javascript" src="../css/skinnytip.js">
47 <!-- SkinnyTip (c) Elliott Brueggeman --></script>
48 <script type="text/javascript">
49 function toggle(thisname)
50 {
51    tr=document.getElementsByTagName('tr');
52    for (i=0;i<tr.length;i++)
53    {
54       if (tr[i].getAttribute(thisname))
55       {
56          if(tr[i].style.display=='none')
57          {
58             tr[i].style.display ='';
59          }
60          else
61          {
62             tr[i].style.display='none';
63          }
64        }
65    }
66 }
67 </script>
68 <script language="JavaScript">  function expand(param){param.style.display=(param.style.display=="none")?"":"none";}</script>
69 </head>
70 <body>
71 <form ENCTYPE="multipart/form-data" METHOD="POST" ACTION="../../../webscripts/jobmonitor.cgi"><table class="midshade" width=100% border=0 frame=below><tr>
72 <td align=left><a href="../summary.html">Return to main results</a></td>
73 <td align=right>Retrieve Phyre Job Id <input type="text" SIZE=30 NAME="jobid"><input type="submit" value="Fetch" name="fetch"></font>
74 </td></tr></table></form>
75 <div id="tiplayer" style="position:absolute; visibility:hidden; z-index:10000;"></div>
76 <center><p><table width=70% border=0 cellspacing=1 cellpadding=1><tr><td><img src="../webimg/playing.png"></td>
77 <td><table class="midshade"><tr><td class="darkshade" style="width:12em;">Job Description</td><td colspan=3>FER_CAPAN_1-144</td></tr><tr><td class="darkshade">Confidence</td><td>99.60%</td><td class="darkshade">Date</td><td>Wed Jan  4 12:02:18 GMT 2017</td></tr>
78 <tr><td class="darkshade">Rank</td><td>34</td><td class="darkshade">Aligned Residues</td><td>91</td></tr>
79 <tr><td class="darkshade">% Identity</td><td>21%</td><td class="darkshade">Template</td><td>c2mj3A_</td></tr>
80 <tr><td class="darkshade">PDB info</td>
81 <td><b>PDB header:</b>metal binding protein</td><td><b>Chain: </b>A: <b>PDB Molecule:</b>iron-sulfur cluster binding protein;</td><td>
82 <b>PDBTitle:</b> backbone 1h, 13c, and 15n chemical shift assignments and structure of2 iron-sulfur cluster binding protein from ehrlichia chaffeensis
83 </td></tr>
84 <tr><td class="darkshade">Resolution</td><td colspan=3>UNK</td></tr>
85 </table>
86 </tr></table></p>
87 <p><button onclick="toggle('confidence');">Show / Hide SS confidence</button></p>
88 <p><button onclick="toggle('consqual');">Show / Hide Conservation and Alignment quality</button></p>
89 <p><table width=95%><tr><td align=left><a class="logo" href="http://www.sbg.bio.ic.ac.uk/phyre2/webscripts/make_pdf.cgi?fileid=56da5616b4559c93/aligs/c2mj3A_.34.alig.html" onClick ="return hideTip();" onMouseOver="return tooltip('Generate JPEG image of this page.', '', 'width:200');" onMouseOut="return hideTip();"><img border=0 src="../webimg/jpeg_icon.jpg"></a></td></tr></table></p>
90 <table border=0><tr><td bgcolor=darkred>&nbsp;&nbsp</td><td>Insertion relative to template</td>
91 <tr><td bgcolor=orange>&nbsp;&nbsp</td><td>Deletion relative to template</td></tr>
92 <tr><td style="border-style:solid; border-width:thick; border-color:red;">&nbsp;&nbsp</td><td>Catalytic residue from the <a href="http://www.ebi.ac.uk/thornton-srv/databases/CSA/">CSA</a></td></tr>
93 <tr><td colspan=2>&nbsp</td></tr>
94 <tr><td colspan=2><a href="http://www.sbg.bio.ic.ac.uk/phyre2/html/help.cgi?id=help/interpret_normal#alignment">Detailed help on interpreting your alignment</a></td></tr></table>
95 <br><br>
96 <table cellpadding=0 cellspacing=0>
97 <tr>
98 <td style="width:100px;">&nbsp</td><td>&nbsp</td>
99 <td class="index">51</td><td class="index">.</td><td class="index">.</td><td class="index">.</td><td>.</td><td class="index">.</td><td class="index">.</td><td class="index">.</td><td class="index">.</td><td></td>
100 <td class="index">60</td><td class="index">.</td><td class="index">.</td><td class="index">.</td><td class="index">.</td><td>.</td><td class="index">.</td><td class="index">.</td><td class="index">.</td><td class="index">.</td><td class="index">70</td><td class="index">.</td><td class="index">.</td><td class="index">.</td><td class="index">.</td><td>.</td><td class="index">.</td><td class="index">.</td><td class="index">.</td><td class="index">.</td><td class="index">80</td><td class="index">.</td><td class="index">.</td><td class="index">.</td><td class="index">.</td><td>.</td><td></td>
101 <td class="index">.</td><td class="index">.</td><td class="index">.</td><td class="index">.</td><td class="index">90</td><td class="index">.</td><td class="index">.</td><td class="index">.</td><td class="index">.</td><td>.</td><td class="index">.</td><td class="index">.</td><td class="index">.</td><td class="index">.</td><td class="index">100</td><td class="index">.</td><td></td>
102 <td></td>
103 <td></td>
104 <td></td>
105 <td></td>
106 <td></td>
107 <td></td>
108 </tr>
109 <tr>
110 <td class="darkshade">Predicted Secondary structure</td><td>&nbsp</td>
111 <td class="strand"><img class="strimg" src="../webimg/beta_s.png"></td><td class="strand"><img class="strimg" src="../webimg/beta_s.png"></td><td class="strand"><img class="strimg" src="../webimg/beta_s.png"></td><td class="strand"><img class="strimg" src="../webimg/beta_s.png"></td><td class="strand"><img class="strimg" src="../webimg/beta_s.png"></td><td class="strand"><img class="strimg" src="../webimg/beta_a.png"></td><td><hr></td><td><hr></td><td><hr></td><td align=center>.</td><td class="strand"><img class="strimg" src="../webimg/beta_s.png"></td><td class="strand"><img class="strimg" src="../webimg/beta_s.png"></td><td class="strand"><img class="strimg" src="../webimg/beta_s.png"></td><td class="strand"><img class="strimg" src="../webimg/beta_s.png"></td><td class="strand"><img class="strimg" src="../webimg/beta_s.png"></td><td class="strand"><img class="strimg" src="../webimg/beta_a.png"></td><td><hr></td><td><hr></td><td><hr></td><td><hr></td><td><hr></td><td class="helix"><img class="helimg" src="../webimg/helix2small.png"></td><td class="helix"><img class="helimg" src="../webimg/helix2small.png"></td><td class="helix"><img class="helimg" src="../webimg/helix2small.png"></td><td class="helix"><img class="helimg" src="../webimg/helix2small.png"></td><td class="helix"><img class="helimg" src="../webimg/helix2small.png"></td><td class="helix"><img class="helimg" src="../webimg/helix2small.png"></td><td class="helix"><img class="helimg" src="../webimg/helix2small.png"></td><td><hr></td><td><hr></td><td><hr></td><td><hr></td><td><hr></td><td class="strand"><img class="strimg" src="../webimg/beta_s.png"></td><td class="strand"><img class="strimg" src="../webimg/beta_a.png"></td><td><hr></td><td align=center>.</td><td><hr></td><td><hr></td><td><hr></td><td><hr></td><td><hr></td><td><hr></td><td><hr></td><td><hr></td><td><hr></td><td><hr></td><td class="strand"><img class="strimg" src="../webimg/beta_s.png"></td><td class="strand"><img class="strimg" src="../webimg/beta_s.png"></td><td class="strand"><img class="strimg" src="../webimg/beta_s.png"></td><td class="strand"><img class="strimg" src="../webimg/beta_a.png"></td><td><hr></td><td><hr></td><td align=center>.</td><td align=center>.</td><td align=center>.</td><td align=center>.</td><td align=center>.</td><td align=center>.</td><td align=center>.</td></tr>
112 <tr confidence=1 style="display:none;">
113 <td class="darkshade">Query SS confidence</td><td>&nbsp</td>
114 <td><hr color="#c93c38" size=4></td><td><hr color="#c93c38" size=4></td><td><hr color="#c93c38" size=4></td><td><hr color="#c93c38" size=4></td><td><hr color="#c93c38" size=4></td><td><hr color="#91a0cb" size=4></td><td><hr color="#b7db48" size=4></td><td><hr color="#c93c38" size=4></td><td><hr color="#f1d532" size=4></td><td align=center>.</td>
115 <td><hr color="#91a0cb" size=4></td><td><hr color="#c93c38" size=4></td><td><hr color="#c93c38" size=4></td><td><hr color="#c93c38" size=4></td><td><hr color="#c93c38" size=4></td><td><hr color="#b7db48" size=4></td><td><hr color="#f1d532" size=4></td><td><hr color="#c93c38" size=4></td><td><hr color="#c93c38" size=4></td><td><hr color="#e68d3d" size=4></td><td><hr color="#91a0cb" size=4></td><td><hr color="#e68d3d" size=4></td><td><hr color="#c93c38" size=4></td><td><hr color="#c93c38" size=4></td><td><hr color="#c93c38" size=4></td><td><hr color="#c93c38" size=4></td><td><hr color="#c93c38" size=4></td><td><hr color="#e68d3d" size=4></td><td><hr color="#f1d532" size=4></td><td><hr color="#e68d3d" size=4></td><td><hr color="#c93c38" size=4></td><td><hr color="#f1d532" size=4></td><td><hr color="#3f3d81" size=4></td><td><hr color="#3f3d81" size=4></td><td><hr color="#3f3d81" size=4></td><td><hr color="#91a0cb" size=4></td><td align=center>.</td>
116 <td><hr color="#76c0d1" size=4></td><td><hr color="#76c0d1" size=4></td><td><hr color="#f1d532" size=4></td><td><hr color="#e68d3d" size=4></td><td><hr color="#65b449" size=4></td><td><hr color="#e68d3d" size=4></td><td><hr color="#f1d532" size=4></td><td><hr color="#b7db48" size=4></td><td><hr color="#f1d532" size=4></td><td><hr color="#6f6da5" size=4></td><td><hr color="#f1d532" size=4></td><td><hr color="#c93c38" size=4></td><td><hr color="#c93c38" size=4></td><td><hr color="#41ac82" size=4></td><td><hr color="#6f6da5" size=4></td><td><hr color="#41ac82" size=4></td><td align=center>.</td>
117 <td align=center>.</td>
118 <td align=center>.</td>
119 <td align=center>.</td>
120 <td align=center>.</td>
121 <td align=center>.</td>
122 <td align=center>.</td>
123 </tr>
124 <tr>
125 <td class="midshadess">Query Sequence</td><td>&nbsp</td>
126 <td style="color:990000;">K</td><td style="color:009900;">V</td><td style="color:990000;">K</td><td style="color:009900;">L</td><td style="color:009900; background-color:#d2d0c1">I</td><td style="color:ff6600;">T</td><td style="color:ff6600; background-color:#d2d0c1">P</td><td style="color:990000; background-color:#d2d0c1">D</td><td style="color:ff6600; background-color:#d2d0c1">G</td><td align=center bgcolor=orange>.</td>
127 <td style="color:ff6600;">P</td><td style="color:009900;">I</td><td style="color:990000;">E</td><td style="color:0000cc;">F</td><td style="color:990000;">D</td><td style="color:6600CC;">C</td><td style="color:ff6600;">P</td><td style="color:990000; background-color:#d2d0c1">D</td><td style="color:990000;">N</td><td style="color:009900;">V</td><td style="color:0000cc;">Y</td><td style="color:009900;">I</td><td style="color:009900; background-color:#d2d0c1">L</td><td style="color:990000;">D</td><td style="color:990000;">Q</td><td style="color:ff6600; background-color:#d2d0c1">A</td><td style="color:990000;">E</td><td style="color:990000;">E</td><td style="color:ff6600;">A</td><td style="color:ff6600;">G</td><td style="color:990000;">H</td><td style="color:990000; background-color:#d2d0c1">D</td><td style="color:009900; background-color:#d2d0c1">L</td><td style="color:ff6600;">P</td><td style="color:0000cc;">Y</td><td style="color:ff6600;">S</td><td align=center bgcolor=orange>.</td>
128 <td style="color:6600CC;">C</td><td style="color:990000;">R</td><td style="color:ff6600;">A</td><td style="color:ff6600;">G</td><td style="color:ff6600;">S</td><td style="color:6600CC; background-color:#d2d0c1">C</td><td style="color:ff6600; background-color:#d2d0c1">S</td><td style="color:ff6600;">S</td><td style="color:6600CC; background-color:#d2d0c1">C</td><td style="color:ff6600;">A</td><td style="color:ff6600;">G</td><td style="color:990000;">K</td><td style="color:009900; background-color:#d2d0c1">I</td><td style="color:ff6600;">A</td><td style="color:ff6600;">G</td><td style="color:ff6600;">G</td><td align=center bgcolor=orange>.</td>
129 <td align=center bgcolor=orange>.</td>
130 <td align=center bgcolor=orange>.</td>
131 <td align=center bgcolor=orange>.</td>
132 <td align=center bgcolor=orange>.</td>
133 <td align=center bgcolor=orange>.</td>
134 <td align=center bgcolor=orange>.</td>
135 </tr>
136 <tr consqual=1 style="display:none">
137 <td class="darkshade">Query Conservation</td><td>&nbsp</td>
138 <td>&nbsp</td><td><hr color=#737065 size=10></td><td>&nbsp</td><td>&nbsp</td><td>&nbsp</td><td>&nbsp</td><td>&nbsp</td><td>&nbsp</td><td><hr color=#737065 size=4></td><td align=center>.</td><td>&nbsp</td><td>&nbsp</td><td>&nbsp</td><td>&nbsp</td><td>&nbsp</td><td>&nbsp</td><td>&nbsp</td><td>&nbsp</td><td>&nbsp</td><td>&nbsp</td><td><hr color=#737065 size=4></td><td><hr color=#737065 size=4></td><td><hr color=#737065 size=10></td><td><hr color=#737065 size=4></td><td><hr color=#737065 size=4></td><td><hr color=#737065 size=4></td><td>&nbsp</td><td>&nbsp</td><td><hr color=#737065 size=4></td><td><hr color=#737065 size=10></td><td><hr color=#737065 size=4></td><td>&nbsp</td><td><hr color=#737065 size=4></td><td>&nbsp</td><td>&nbsp</td><td><hr color=#737065 size=4></td><td align=center>.</td><td><hr color=#737065 size=10></td><td><hr color=#737065 size=4></td><td>&nbsp</td><td><hr color=#737065 size=10></td><td>&nbsp</td><td><hr color=#737065 size=10></td><td><hr color=#737065 size=4></td><td><hr color=#737065 size=4></td><td><hr color=#737065 size=10></td><td>&nbsp</td><td>&nbsp</td><td>&nbsp</td><td><hr color=#737065 size=4></td><td>&nbsp</td><td>&nbsp</td><td><hr color=#737065 size=10></td><td align=center>.</td><td align=center>.</td><td align=center>.</td><td align=center>.</td><td align=center>.</td><td align=center>.</td><td align=center>.</td></tr>
139 <tr consqual=1 style="display:none">
140 <td class="midshadess">Alig confidence</td><td>&nbsp</td>
141 <td><hr color="#f1d532" size=4></td><td><hr color="#c93c38" size=4></td><td><hr color="#f1d532" size=4></td><td><hr color="#c93c38" size=4></td><td><hr color="#f1d532" size=4></td><td><hr color="#65b449" size=4></td><td><hr color="#f1d532" size=4></td><td><hr color="#f1d532" size=4></td><td><hr color="#c93c38" size=4></td><td align=center>.</td><td><hr color="#65b449" size=4></td><td><hr color="#f1d532" size=4></td><td><hr color="#f1d532" size=4></td><td><hr color="#c93c38" size=4></td><td><hr color="#f1d532" size=4></td><td><hr color="#f1d532" size=4></td><td><hr color="#f1d532" size=4></td><td><hr color="#f1d532" size=4></td><td><hr color="#c93c38" size=4></td><td><hr color="#f1d532" size=4></td><td><hr color="#f1d532" size=4></td><td><hr color="#c93c38" size=4></td><td><hr color="#c93c38" size=4></td><td><hr color="#f1d532" size=4></td><td><hr color="#f1d532" size=4></td><td><hr color="#f1d532" size=4></td><td><hr color="#f1d532" size=4></td><td><hr color="#f1d532" size=4></td><td><hr color="#f1d532" size=4></td><td><hr color="#c93c38" size=4></td><td><hr color="#c93c38" size=4></td><td><hr color="#f1d532" size=4></td><td><hr color="#f1d532" size=4></td><td><hr color="#f1d532" size=4></td><td><hr color="#f1d532" size=4></td><td><hr color="#65b449" size=4></td><td align=center>.</td><td><hr color="#c93c38" size=4></td><td><hr color="#f1d532" size=4></td><td><hr color="#65b449" size=4></td><td><hr color="#c93c38" size=4></td><td><hr color="#65b449" size=4></td><td><hr color="#c93c38" size=4></td><td><hr color="#c93c38" size=4></td><td><hr color="#f1d532" size=4></td><td><hr color="#c93c38" size=4></td><td><hr color="#f1d532" size=4></td><td><hr color="#f1d532" size=4></td><td><hr color="#f1d532" size=4></td><td><hr color="#c93c38" size=4></td><td><hr color="#65b449" size=4></td><td><hr color="#f1d532" size=4></td><td><hr color="#c93c38" size=4></td><td align=center>.</td><td align=center>.</td><td align=center>.</td><td align=center>.</td><td align=center>.</td><td align=center>.</td><td align=center>.</td></tr>
142 <tr consqual=1 style="display:none">
143 <td class="darkshade">Template Conservation</td><td>&nbsp</td>
144 <td>&nbsp</td><td><hr color=#d2d0c1 size=4></td><td><hr color=#d2d0c1 size=4></td><td>&nbsp</td><td><hr color=#d2d0c1 size=4></td><td>&nbsp</td><td>&nbsp</td><td><hr color=#d2d0c1 size=4></td><td><hr color=#d2d0c1 size=10></td><td>&nbsp</td><td>&nbsp</td><td>&nbsp</td><td>&nbsp</td><td><hr color=#d2d0c1 size=4></td><td>&nbsp</td><td>&nbsp</td><td>&nbsp</td><td>&nbsp</td><td><hr color=#d2d0c1 size=10></td><td>&nbsp</td><td><hr color=#d2d0c1 size=4></td><td><hr color=#d2d0c1 size=10></td><td><hr color=#d2d0c1 size=4></td><td>&nbsp</td><td><hr color=#d2d0c1 size=4></td><td>&nbsp</td><td>&nbsp</td><td>&nbsp</td><td>&nbsp</td><td><hr color=#d2d0c1 size=4></td><td><hr color=#d2d0c1 size=4></td><td>&nbsp</td><td><hr color=#d2d0c1 size=4></td><td>&nbsp</td><td>&nbsp</td><td>&nbsp</td><td><hr color=#d2d0c1 size=10></td><td>&nbsp</td><td><hr color=#d2d0c1 size=10></td><td>&nbsp</td><td><hr color=#d2d0c1 size=4></td><td>&nbsp</td><td><hr color=#d2d0c1 size=10></td><td><hr color=#d2d0c1 size=4></td><td><hr color=#d2d0c1 size=4></td><td><hr color=#d2d0c1 size=10></td><td>&nbsp</td><td><hr color=#d2d0c1 size=4></td><td>&nbsp</td><td><hr color=#d2d0c1 size=4></td><td>&nbsp</td><td>&nbsp</td><td><hr color=#d2d0c1 size=4></td><td>&nbsp</td><td>&nbsp</td><td>&nbsp</td><td>&nbsp</td><td>&nbsp</td><td>&nbsp</td><td>&nbsp</td></tr>
145 <tr>
146 <td class="midshadess">Template Sequence</td><td>&nbsp</td>
147 <td style="color:009900;">L</td><td style="color:009900;">I</td><td style="color:ff6600;">T</td><td style="color:0000cc;">F</td><td style="color:009900; background-color:#d2d0c1">I</td><td style="color:ff6600;">S</td><td style="color:ff6600; background-color:#d2d0c1">P</td><td style="color:990000; background-color:#d2d0c1">D</td><td style="color:ff6600; background-color:#d2d0c1">G</td><td style="color:ff6600;">S</td><td style="color:990000;">R</td><td style="color:990000;">K</td><td style="color:ff6600;">T</td><td style="color:0000cc;">Y</td><td style="color:990000;">E</td><td style="color:ff6600;">A</td><td style="color:0000cc;">Y</td><td style="color:990000; background-color:#d2d0c1">D</td><td style="color:ff6600;">G</td><td style="color:990000;">E</td><td style="color:ff6600;">T</td><td style="color:009900;">L</td><td style="color:009900; background-color:#d2d0c1">L</td><td style="color:ff6600;">S</td><td style="color:009900;">L</td><td style="color:ff6600; background-color:#d2d0c1">A</td><td style="color:990000;">H</td><td style="color:990000;">R</td><td style="color:990000;">N</td><td style="color:990000;">N</td><td style="color:009900;">V</td><td style="color:990000; background-color:#d2d0c1">D</td><td style="color:009900; background-color:#d2d0c1">L</td><td style="color:990000;">E</td><td style="color:ff6600;">G</td><td style="color:ff6600;">A</td><td style="color:6600CC;">C</td><td style="color:990000;">E</td><td style="color:ff6600;">G</td><td style="color:ff6600;">S</td><td style="color:009900;">L</td><td style="color:ff6600;">A</td><td style="color:6600CC; background-color:#d2d0c1">C</td><td style="color:ff6600; background-color:#d2d0c1">S</td><td style="color:ff6600;">T</td><td style="color:6600CC; background-color:#d2d0c1">C</td><td style="color:990000;">H</td><td style="color:009900;">V</td><td style="color:009900;">I</td><td style="color:009900; background-color:#d2d0c1">I</td><td style="color:990000;">D</td><td style="color:ff6600;">P</td><td style="color:ff6600;">S</td><td style="color:6600CC;">W</td><td style="color:0000cc;">Y</td><td style="color:990000;">D</td><td style="color:009900;">I</td><td style="color:009900;">V</td><td style="color:990000;">E</td><td style="color:990000;">Q</td></tr>
148 <tr>
149 <td nowrap class="darkshade">Template Known Secondary structure</td><td>&nbsp</td>
150 <td class="strand"><img class="strimg" src="../webimg/beta_s.png"></td><td class="strand"><img class="strimg" src="../webimg/beta_s.png"></td><td class="strand"><img class="strimg" src="../webimg/beta_s.png"></td><td class="strand"><img class="strimg" src="../webimg/beta_s.png"></td><td class="strand"><img class="strimg" src="../webimg/beta_a.png"></td><td><hr></td><td>T</td><td>T</td><td>S</td><td><hr></td><td class="strand"><img class="strimg" src="../webimg/beta_s.png"></td><td class="strand"><img class="strimg" src="../webimg/beta_s.png"></td><td class="strand"><img class="strimg" src="../webimg/beta_s.png"></td><td class="strand"><img class="strimg" src="../webimg/beta_s.png"></td><td class="strand"><img class="strimg" src="../webimg/beta_a.png"></td><td><hr></td><td><hr></td><td>S</td><td>S</td><td><hr></td><td><hr></td><td>T</td><td class="helix"><img class="helimg" src="../webimg/helix2small.png"></td><td class="helix"><img class="helimg" src="../webimg/helix2small.png"></td><td class="helix"><img class="helimg" src="../webimg/helix2small.png"></td><td class="helix"><img class="helimg" src="../webimg/helix2small.png"></td><td class="helix"><img class="helimg" src="../webimg/helix2small.png"></td><td class="helix"><img class="helimg" src="../webimg/helix2small.png"></td><td>T</td><td>T</td><td><hr></td><td><hr></td><td><hr></td><td><hr></td><td><hr></td><td><hr></td><td><hr></td><td><hr></td><td><hr></td><td><hr></td><td>S</td><td><hr></td><td><hr></td><td><hr></td><td>S</td><td><hr></td><td><hr></td><td class="strand"><img class="strimg" src="../webimg/beta_s.png"></td><td class="strand"><img class="strimg" src="../webimg/beta_a.png"></td><td><hr></td><td><hr></td><td class="helix"><img class="helimg" src="../webimg/helix2small.png"></td><td class="helix"><img class="helimg" src="../webimg/helix2small.png"></td><td class="helix"><img class="helimg" src="../webimg/helix2small.png"></td><td class="helix"><img class="helimg" src="../webimg/helix2small.png"></td><td class="helix"><img class="helimg" src="../webimg/helix2small.png"></td><td class="helix"><img class="helimg" src="../webimg/helix2small.png"></td><td class="helix"><img class="helimg" src="../webimg/helix2small.png"></td><td class="helix"><img class="helimg" src="../webimg/helix2small.png"></td><td class="helix"><img class="helimg" src="../webimg/helix2small.png"></td></tr>
151 <tr>
152 <td class="midshadess">Template Predicted Secondary structure</td><td>&nbsp</td>
153 <td class="strand"><img class="strimg" src="../webimg/beta_s.png"></td><td class="strand"><img class="strimg" src="../webimg/beta_s.png"></td><td class="strand"><img class="strimg" src="../webimg/beta_s.png"></td><td class="strand"><img class="strimg" src="../webimg/beta_s.png"></td><td class="strand"><img class="strimg" src="../webimg/beta_a.png"></td><td><hr></td><td><hr></td><td><hr></td><td><hr></td><td><hr></td><td class="strand"><img class="strimg" src="../webimg/beta_s.png"></td><td class="strand"><img class="strimg" src="../webimg/beta_s.png"></td><td class="strand"><img class="strimg" src="../webimg/beta_s.png"></td><td class="strand"><img class="strimg" src="../webimg/beta_s.png"></td><td class="strand"><img class="strimg" src="../webimg/beta_s.png"></td><td class="strand"><img class="strimg" src="../webimg/beta_a.png"></td><td><hr></td><td><hr></td><td><hr></td><td><hr></td><td><hr></td><td class="helix"><img class="helimg" src="../webimg/helix2small.png"></td><td class="helix"><img class="helimg" src="../webimg/helix2small.png"></td><td class="helix"><img class="helimg" src="../webimg/helix2small.png"></td><td class="helix"><img class="helimg" src="../webimg/helix2small.png"></td><td class="helix"><img class="helimg" src="../webimg/helix2small.png"></td><td class="helix"><img class="helimg" src="../webimg/helix2small.png"></td><td class="helix"><img class="helimg" src="../webimg/helix2small.png"></td><td><hr></td><td><hr></td><td><hr></td><td><hr></td><td><hr></td><td><hr></td><td><hr></td><td><hr></td><td><hr></td><td><hr></td><td><hr></td><td><hr></td><td><hr></td><td><hr></td><td><hr></td><td><hr></td><td><hr></td><td><hr></td><td class="strand"><img class="strimg" src="../webimg/beta_s.png"></td><td class="strand"><img class="strimg" src="../webimg/beta_s.png"></td><td class="strand"><img class="strimg" src="../webimg/beta_s.png"></td><td class="strand"><img class="strimg" src="../webimg/beta_s.png"></td><td class="strand"><img class="strimg" src="../webimg/beta_a.png"></td><td><hr></td><td><hr></td><td><hr></td><td><hr></td><td><hr></td><td><hr></td><td><hr></td><td><hr></td><td><hr></td></tr>
154 <tr confidence=1 style="display:none">
155 <td class="darkshade">Template SS confidence</td><td>&nbsp</td>
156 <td><hr color="#b7db48" size=4></td><td><hr color="#c93c38" size=4></td><td><hr color="#c93c38" size=4></td><td><hr color="#c93c38" size=4></td><td><hr color="#e68d3d" size=4></td><td><hr color="#f1d532" size=4></td><td><hr color="#c93c38" size=4></td><td><hr color="#c93c38" size=4></td><td><hr color="#c93c38" size=4></td><td><hr color="#e68d3d" size=4></td><td><hr color="#e68d3d" size=4></td><td><hr color="#c93c38" size=4></td><td><hr color="#c93c38" size=4></td><td><hr color="#c93c38" size=4></td><td><hr color="#c93c38" size=4></td><td><hr color="#41ac82" size=4></td><td><hr color="#f1d532" size=4></td><td><hr color="#c93c38" size=4></td><td><hr color="#c93c38" size=4></td><td><hr color="#e68d3d" size=4></td><td><hr color="#b7db48" size=4></td><td><hr color="#f1d532" size=4></td><td><hr color="#e68d3d" size=4></td><td><hr color="#c93c38" size=4></td><td><hr color="#c93c38" size=4></td><td><hr color="#c93c38" size=4></td><td><hr color="#c93c38" size=4></td><td><hr color="#f1d532" size=4></td><td><hr color="#65b449" size=4></td><td><hr color="#c93c38" size=4></td><td><hr color="#c93c38" size=4></td><td><hr color="#c93c38" size=4></td><td><hr color="#f1d532" size=4></td><td><hr color="#b7db48" size=4></td><td><hr color="#76c0d1" size=4></td><td><hr color="#91a0cb" size=4></td><td><hr color="#41ac82" size=4></td><td><hr color="#65b449" size=4></td><td><hr color="#f1d532" size=4></td><td><hr color="#f1d532" size=4></td><td><hr color="#b7db48" size=4></td><td><hr color="#6f6da5" size=4></td><td><hr color="#65b449" size=4></td><td><hr color="#b7db48" size=4></td><td><hr color="#f1d532" size=4></td><td><hr color="#b7db48" size=4></td><td><hr color="#f1d532" size=4></td><td><hr color="#c93c38" size=4></td><td><hr color="#c93c38" size=4></td><td><hr color="#c93c38" size=4></td><td><hr color="#41ac82" size=4></td><td><hr color="#41ac82" size=4></td><td><hr color="#f1d532" size=4></td><td><hr color="#65b449" size=4></td><td><hr color="#76c0d1" size=4></td><td><hr color="#41ac82" size=4></td><td><hr color="#65b449" size=4></td><td><hr color="#65b449" size=4></td><td><hr color="#f1d532" size=4></td><td><hr color="#e68d3d" size=4></td></tr>
157 <tr>
158 <td style="width:100px;">&nbsp</td><td>&nbsp</td>
159 <td class="index">3</td><td class="index">.</td><td>.</td><td class="index">.</td><td class="index">.</td><td class="index">.</td><td class="index">.</td><td class="index">10</td><td class="index">.</td><td class="index">.</td><td class="index">.</td><td class="index">.</td><td>.</td><td class="index">.</td><td class="index">.</td><td class="index">.</td><td class="index">.</td><td class="index">20</td><td class="index">.</td><td class="index">.</td><td class="index">.</td><td class="index">.</td><td>.</td><td class="index">.</td><td class="index">.</td><td class="index">.</td><td class="index">.</td><td class="index">30</td><td class="index">.</td><td class="index">.</td><td class="index">.</td><td class="index">.</td><td>.</td><td class="index">.</td><td class="index">.</td><td class="index">.</td><td class="index">.</td><td class="index">40</td><td class="index">.</td><td class="index">.</td><td class="index">.</td><td class="index">.</td><td>.</td><td class="index">.</td><td class="index">.</td><td class="index">.</td><td class="index">.</td><td class="index">50</td><td class="index">.</td><td class="index">.</td><td class="index">.</td><td class="index">.</td><td>.</td><td class="index">.</td><td class="index">.</td><td class="index">.</td><td class="index">.</td><td class="index">60</td><td class="index">.</td><td class="index">.</td></tr>
160 <tr><td>&nbsp</td></tr>
161 <tr>
162 <td style="width:100px;">&nbsp</td><td>&nbsp</td>
163 <td></td>
164 <td></td>
165 <td class="index">102</td><td class="index">.</td><td class="index">.</td><td>.</td><td class="index">.</td><td class="index">.</td><td class="index">.</td><td class="index">.</td><td class="index">110</td><td class="index">.</td><td></td>
166 <td class="index">.</td><td class="index">.</td><td class="index">.</td><td>.</td><td class="index">.</td><td class="index">.</td><td class="index">.</td><td class="index">.</td><td class="index">120</td><td class="index">.</td><td class="index">.</td><td class="index">.</td><td class="index">.</td><td>.</td><td class="index">.</td><td class="index">.</td><td class="index">.</td><td class="index">.</td><td class="index">130</td><td class="index">.</td><td></td>
167 <td></td>
168 <td></td>
169 <td class="index">.</td><td class="index">.</td><td class="index">.</td><td>.</td><td class="index">.</td><td class="index">.</td><td class="index">.</td><td class="index">.</td><td class="index">140</td><td class="index">.</td></tr>
170 <tr>
171 <td class="darkshade">Predicted Secondary structure</td><td>&nbsp</td>
172 <td align=center>.</td><td align=center>.</td><td><hr></td><td><hr></td><td><hr></td><td><hr></td><td><hr></td><td><hr></td><td><hr></td><td><hr></td><td><hr></td><td><hr></td><td align=center>.</td><td><hr></td><td class="helix"><img class="helimg" src="../webimg/helix2small.png"></td><td class="helix"><img class="helimg" src="../webimg/helix2small.png"></td><td class="helix"><img class="helimg" src="../webimg/helix2small.png"></td><td class="helix"><img class="helimg" src="../webimg/helix2small.png"></td><td><hr></td><td><hr></td><td><hr></td><td class="strand"><img class="strimg" src="../webimg/beta_s.png"></td><td class="strand"><img class="strimg" src="../webimg/beta_s.png"></td><td class="strand"><img class="strimg" src="../webimg/beta_s.png"></td><td class="strand"><img class="strimg" src="../webimg/beta_s.png"></td><td class="strand"><img class="strimg" src="../webimg/beta_s.png"></td><td class="strand"><img class="strimg" src="../webimg/beta_s.png"></td><td class="strand"><img class="strimg" src="../webimg/beta_s.png"></td><td class="strand"><img class="strimg" src="../webimg/beta_s.png"></td><td class="strand"><img class="strimg" src="../webimg/beta_a.png"></td><td><hr></td><td><hr></td><td><hr></td><td align=center>.</td><td align=center>.</td><td align=center>.</td><td class="strand"><img class="strimg" src="../webimg/beta_s.png"></td><td class="strand"><img class="strimg" src="../webimg/beta_s.png"></td><td class="strand"><img class="strimg" src="../webimg/beta_s.png"></td><td class="strand"><img class="strimg" src="../webimg/beta_s.png"></td><td class="strand"><img class="strimg" src="../webimg/beta_a.png"></td><td><hr></td><td><hr></td><td class="helix"><img class="helimg" src="../webimg/helix2small.png"></td><td class="helix"><img class="helimg" src="../webimg/helix2small.png"></td><td class="helix"><img class="helimg" src="../webimg/helix2small.png"></td></tr>
173 <tr confidence=1 style="display:none;">
174 <td class="darkshade">Query SS confidence</td><td>&nbsp</td>
175 <td align=center>.</td>
176 <td align=center>.</td>
177 <td><hr color="#91a0cb" size=4></td><td><hr color="#6f6da5" size=4></td><td><hr color="#6f6da5" size=4></td><td><hr color="#65b449" size=4></td><td><hr color="#b7db48" size=4></td><td><hr color="#b7db48" size=4></td><td><hr color="#b7db48" size=4></td><td><hr color="#b7db48" size=4></td><td><hr color="#b7db48" size=4></td><td><hr color="#e68d3d" size=4></td><td align=center>.</td>
178 <td><hr color="#c93c38" size=4></td><td><hr color="#f1d532" size=4></td><td><hr color="#b7db48" size=4></td><td><hr color="#e68d3d" size=4></td><td><hr color="#76c0d1" size=4></td><td><hr color="#41ac82" size=4></td><td><hr color="#c93c38" size=4></td><td><hr color="#f1d532" size=4></td><td><hr color="#65b449" size=4></td><td><hr color="#c93c38" size=4></td><td><hr color="#c93c38" size=4></td><td><hr color="#b7db48" size=4></td><td><hr color="#41ac82" size=4></td><td><hr color="#76c0d1" size=4></td><td><hr color="#91a0cb" size=4></td><td><hr color="#41ac82" size=4></td><td><hr color="#65b449" size=4></td><td><hr color="#3f3d81" size=4></td><td><hr color="#b7db48" size=4></td><td><hr color="#f1d532" size=4></td><td align=center>.</td>
179 <td align=center>.</td>
180 <td align=center>.</td>
181 <td><hr color="#b7db48" size=4></td><td><hr color="#c93c38" size=4></td><td><hr color="#c93c38" size=4></td><td><hr color="#c93c38" size=4></td><td><hr color="#91a0cb" size=4></td><td><hr color="#41ac82" size=4></td><td><hr color="#e68d3d" size=4></td><td><hr color="#41ac82" size=4></td><td><hr color="#65b449" size=4></td><td><hr color="#41ac82" size=4></td></tr>
182 <tr>
183 <td class="midshadess">Query Sequence</td><td>&nbsp</td>
184 <td align=center bgcolor=orange>.</td>
185 <td align=center bgcolor=orange>.</td>
186 <td style="color:ff6600;">A</td><td style="color:009900;">V</td><td style="color:990000;">D</td><td style="color:990000;">Q</td><td style="color:ff6600;">T</td><td style="color:990000;">D</td><td style="color:ff6600;">G</td><td style="color:990000;">N</td><td style="color:0000cc;">F</td><td style="color:009900; background-color:#d2d0c1">L</td><td align=center bgcolor=orange>.</td>
187 <td style="color:990000;">D</td><td style="color:990000;">D</td><td style="color:990000;">D</td><td style="color:990000;">Q</td><td style="color:009900; background-color:#d2d0c1">L</td><td style="color:990000;">E</td><td style="color:990000;">E</td><td style="color:ff6600;">G</td><td style="color:6600CC;">W</td><td style="color:009900;">V</td><td style="color:009900; background-color:#d2d0c1">L</td><td style="color:ff6600;">T</td><td style="color:6600CC; background-color:#d2d0c1">C</td><td style="color:009900;">V</td><td style="color:ff6600;">A</td><td style="color:0000cc;">Y</td><td style="color:ff6600;">P</td><td style="color:990000;">Q</td><td style="color:ff6600;">S</td><td style="color:990000;">D</td><td align=center bgcolor=orange>.</td>
188 <td align=center bgcolor=orange>.</td>
189 <td align=center bgcolor=orange>.</td>
190 <td style="color:009900;">V</td><td style="color:ff6600;">T</td><td style="color:009900;">I</td><td style="color:990000;">E</td><td style="color:ff6600;">T</td><td style="color:990000;">H</td><td style="color:990000;">K</td><td style="color:990000; background-color:#d2d0c1">E</td><td style="color:ff6600;">A</td><td style="color:990000;">E</td></tr>
191 <tr consqual=1 style="display:none">
192 <td class="darkshade">Query Conservation</td><td>&nbsp</td>
193 <td align=center>.</td><td align=center>.</td><td>&nbsp</td><td><hr color=#737065 size=4></td><td>&nbsp</td><td>&nbsp</td><td>&nbsp</td><td>&nbsp</td><td>&nbsp</td><td>&nbsp</td><td>&nbsp</td><td><hr color=#737065 size=4></td><td align=center>.</td><td>&nbsp</td><td>&nbsp</td><td>&nbsp</td><td>&nbsp</td><td>&nbsp</td><td>&nbsp</td><td>&nbsp</td><td><hr color=#737065 size=4></td><td>&nbsp</td><td><hr color=#737065 size=4></td><td><hr color=#737065 size=10></td><td>&nbsp</td><td><hr color=#737065 size=10></td><td>&nbsp</td><td><hr color=#737065 size=4></td><td>&nbsp</td><td><hr color=#737065 size=4></td><td>&nbsp</td><td><hr color=#737065 size=4></td><td><hr color=#737065 size=10></td><td align=center>.</td><td align=center>.</td><td align=center>.</td><td><hr color=#737065 size=4></td><td>&nbsp</td><td><hr color=#737065 size=10></td><td><hr color=#737065 size=4></td><td>&nbsp</td><td>&nbsp</td><td>&nbsp</td><td><hr color=#737065 size=4></td><td>&nbsp</td><td><hr color=#737065 size=4></td></tr>
194 <tr consqual=1 style="display:none">
195 <td class="midshadess">Alig confidence</td><td>&nbsp</td>
196 <td align=center>.</td><td align=center>.</td><td><hr color="#65b449" size=4></td><td><hr color="#f1d532" size=4></td><td><hr color="#65b449" size=4></td><td><hr color="#65b449" size=4></td><td><hr color="#65b449" size=4></td><td><hr color="#f1d532" size=4></td><td><hr color="#65b449" size=4></td><td><hr color="#65b449" size=4></td><td><hr color="#65b449" size=4></td><td><hr color="#c93c38" size=4></td><td align=center>.</td><td><hr color="#65b449" size=4></td><td><hr color="#65b449" size=4></td><td><hr color="#f1d532" size=4></td><td><hr color="#f1d532" size=4></td><td><hr color="#65b449" size=4></td><td><hr color="#65b449" size=4></td><td><hr color="#f1d532" size=4></td><td><hr color="#c93c38" size=4></td><td><hr color="#f1d532" size=4></td><td><hr color="#f1d532" size=4></td><td><hr color="#c93c38" size=4></td><td><hr color="#f1d532" size=4></td><td><hr color="#c93c38" size=4></td><td><hr color="#c93c38" size=4></td><td><hr color="#65b449" size=4></td><td><hr color="#65b449" size=4></td><td><hr color="#f1d532" size=4></td><td><hr color="#65b449" size=4></td><td><hr color="#65b449" size=4></td><td><hr color="#c93c38" size=4></td><td align=center>.</td><td align=center>.</td><td align=center>.</td><td><hr color="#f1d532" size=4></td><td><hr color="#f1d532" size=4></td><td><hr color="#c93c38" size=4></td><td><hr color="#f1d532" size=4></td><td><hr color="#f1d532" size=4></td><td><hr color="#c93c38" size=4></td><td><hr color="#f1d532" size=4></td><td><hr color="#f1d532" size=4></td><td><hr color="#65b449" size=4></td><td><hr color="#f1d532" size=4></td></tr>
197 <tr consqual=1 style="display:none">
198 <td class="darkshade">Template Conservation</td><td>&nbsp</td>
199 <td>&nbsp</td><td>&nbsp</td><td>&nbsp</td><td>&nbsp</td><td>&nbsp</td><td>&nbsp</td><td>&nbsp</td><td><hr color=#d2d0c1 size=10></td><td>&nbsp</td><td>&nbsp</td><td>&nbsp</td><td><hr color=#d2d0c1 size=10></td><td>&nbsp</td><td>&nbsp</td><td>&nbsp</td><td>&nbsp</td><td>&nbsp</td><td>&nbsp</td><td>&nbsp</td><td>&nbsp</td><td>&nbsp</td><td>&nbsp</td><td><hr color=#d2d0c1 size=10></td><td><hr color=#d2d0c1 size=10></td><td><hr color=#d2d0c1 size=4></td><td><hr color=#d2d0c1 size=10></td><td><hr color=#d2d0c1 size=10></td><td>&nbsp</td><td>&nbsp</td><td><hr color=#d2d0c1 size=4></td><td>&nbsp</td><td>&nbsp</td><td><hr color=#d2d0c1 size=4></td><td><hr color=#d2d0c1 size=4></td><td>&nbsp</td><td><hr color=#d2d0c1 size=4></td><td>&nbsp</td><td>&nbsp</td><td><hr color=#d2d0c1 size=10></td><td>&nbsp</td><td><hr color=#d2d0c1 size=4></td><td><hr color=#d2d0c1 size=10></td><td>&nbsp</td><td>&nbsp</td><td>&nbsp</td><td><hr color=#d2d0c1 size=4></td></tr>
200 <tr>
201 <td class="midshadess">Template Sequence</td><td>&nbsp</td>
202 <td style="color:990000;">H</td><td style="color:990000;">N</td><td style="color:990000;">E</td><td style="color:009900;">I</td><td style="color:ff6600;">S</td><td style="color:990000;">D</td><td style="color:990000;">E</td><td style="color:990000;">E</td><td style="color:990000;">N</td><td style="color:990000;">D</td><td style="color:009900;">M</td><td style="color:009900; background-color:#d2d0c1">L</td><td style="color:990000;">D</td><td style="color:009900;">L</td><td style="color:ff6600;">A</td><td style="color:0000cc;">F</td><td style="color:ff6600;">G</td><td style="color:009900; background-color:#d2d0c1">L</td><td style="color:ff6600;">T</td><td style="color:990000;">D</td><td style="color:ff6600;">T</td><td style="color:ff6600;">S</td><td style="color:990000;">R</td><td style="color:009900; background-color:#d2d0c1">L</td><td style="color:ff6600;">G</td><td style="color:6600CC; background-color:#d2d0c1">C</td><td style="color:990000;">Q</td><td style="color:009900;">I</td><td style="color:009900;">I</td><td style="color:009900;">L</td><td style="color:ff6600;">T</td><td style="color:990000;">K</td><td style="color:990000;">E</td><td style="color:009900;">L</td><td style="color:990000;">D</td><td style="color:ff6600;">G</td><td style="color:009900;">L</td><td style="color:6600CC;">C</td><td style="color:009900;">V</td><td style="color:009900;">I</td><td style="color:009900;">L</td><td style="color:ff6600;">P</td><td style="color:ff6600;">T</td><td style="color:990000; background-color:#d2d0c1">E</td><td style="color:ff6600;">T</td><td style="color:990000;">R</td></tr>
203 <tr>
204 <td nowrap class="darkshade">Template Known Secondary structure</td><td>&nbsp</td>
205 <td class="helix"><img class="helimg" src="../webimg/helix2small.png"></td><td>S</td><td><hr></td><td><hr></td><td><hr></td><td>T</td><td>T</td><td class="helix"><img class="helimg" src="../webimg/helix2small.png"></td><td class="helix"><img class="helimg" src="../webimg/helix2small.png"></td><td class="helix"><img class="helimg" src="../webimg/helix2small.png"></td><td class="helix"><img class="helimg" src="../webimg/helix2small.png"></td><td class="helix"><img class="helimg" src="../webimg/helix2small.png"></td><td class="helix"><img class="helimg" src="../webimg/helix2small.png"></td><td class="helix"><img class="helimg" src="../webimg/helix2small.png"></td><td><hr></td><td><hr></td><td>S</td><td><hr></td><td><hr></td><td>S</td><td>S</td><td class="strand"><img class="strimg" src="../webimg/beta_s.png"></td><td class="strand"><img class="strimg" src="../webimg/beta_a.png"></td><td>S</td><td><hr></td><td>S</td><td>S</td><td><hr></td><td><hr></td><td><hr></td><td><hr></td><td>G</td><td>G</td><td>G</td><td>T</td><td>T</td><td><hr></td><td class="strand"><img class="strimg" src="../webimg/beta_s.png"></td><td class="strand"><img class="strimg" src="../webimg/beta_s.png"></td><td class="strand"><img class="strimg" src="../webimg/beta_a.png"></td><td><hr></td><td>S</td><td>S</td><td>S</td><td><hr></td><td><hr></td></tr>
206 <tr>
207 <td class="midshadess">Template Predicted Secondary structure</td><td>&nbsp</td>
208 <td><hr></td><td><hr></td><td><hr></td><td><hr></td><td><hr></td><td class="helix"><img class="helimg" src="../webimg/helix2small.png"></td><td class="helix"><img class="helimg" src="../webimg/helix2small.png"></td><td class="helix"><img class="helimg" src="../webimg/helix2small.png"></td><td class="helix"><img class="helimg" src="../webimg/helix2small.png"></td><td class="helix"><img class="helimg" src="../webimg/helix2small.png"></td><td class="helix"><img class="helimg" src="../webimg/helix2small.png"></td><td class="helix"><img class="helimg" src="../webimg/helix2small.png"></td><td class="helix"><img class="helimg" src="../webimg/helix2small.png"></td><td class="helix"><img class="helimg" src="../webimg/helix2small.png"></td><td><hr></td><td><hr></td><td><hr></td><td><hr></td><td><hr></td><td><hr></td><td><hr></td><td class="strand"><img class="strimg" src="../webimg/beta_s.png"></td><td class="strand"><img class="strimg" src="../webimg/beta_s.png"></td><td class="strand"><img class="strimg" src="../webimg/beta_s.png"></td><td class="strand"><img class="strimg" src="../webimg/beta_s.png"></td><td class="strand"><img class="strimg" src="../webimg/beta_s.png"></td><td class="strand"><img class="strimg" src="../webimg/beta_s.png"></td><td class="strand"><img class="strimg" src="../webimg/beta_s.png"></td><td class="strand"><img class="strimg" src="../webimg/beta_s.png"></td><td class="strand"><img class="strimg" src="../webimg/beta_a.png"></td><td><hr></td><td><hr></td><td><hr></td><td><hr></td><td><hr></td><td><hr></td><td class="strand"><img class="strimg" src="../webimg/beta_s.png"></td><td class="strand"><img class="strimg" src="../webimg/beta_s.png"></td><td class="strand"><img class="strimg" src="../webimg/beta_s.png"></td><td class="strand"><img class="strimg" src="../webimg/beta_a.png"></td><td><hr></td><td><hr></td><td class="helix"><img class="helimg" src="../webimg/helix2small.png"></td><td class="helix"><img class="helimg" src="../webimg/helix2small.png"></td><td class="helix"><img class="helimg" src="../webimg/helix2small.png"></td><td><hr></td></tr>
209 <tr confidence=1 style="display:none">
210 <td class="darkshade">Template SS confidence</td><td>&nbsp</td>
211 <td><hr color="#e68d3d" size=4></td><td><hr color="#e68d3d" size=4></td><td><hr color="#e68d3d" size=4></td><td><hr color="#e68d3d" size=4></td><td><hr color="#c93c38" size=4></td><td><hr color="#e68d3d" size=4></td><td><hr color="#e68d3d" size=4></td><td><hr color="#c93c38" size=4></td><td><hr color="#c93c38" size=4></td><td><hr color="#e68d3d" size=4></td><td><hr color="#b7db48" size=4></td><td><hr color="#91a0cb" size=4></td><td><hr color="#6f6da5" size=4></td><td><hr color="#3f3d81" size=4></td><td><hr color="#3f3d81" size=4></td><td><hr color="#91a0cb" size=4></td><td><hr color="#b7db48" size=4></td><td><hr color="#e68d3d" size=4></td><td><hr color="#e68d3d" size=4></td><td><hr color="#c93c38" size=4></td><td><hr color="#f1d532" size=4></td><td><hr color="#91a0cb" size=4></td><td><hr color="#65b449" size=4></td><td><hr color="#65b449" size=4></td><td><hr color="#e68d3d" size=4></td><td><hr color="#e68d3d" size=4></td><td><hr color="#f1d532" size=4></td><td><hr color="#e68d3d" size=4></td><td><hr color="#c93c38" size=4></td><td><hr color="#e68d3d" size=4></td><td><hr color="#b7db48" size=4></td><td><hr color="#b7db48" size=4></td><td><hr color="#b7db48" size=4></td><td><hr color="#65b449" size=4></td><td><hr color="#e68d3d" size=4></td><td><hr color="#91a0cb" size=4></td><td><hr color="#e68d3d" size=4></td><td><hr color="#c93c38" size=4></td><td><hr color="#c93c38" size=4></td><td><hr color="#e68d3d" size=4></td><td><hr color="#91a0cb" size=4></td><td><hr color="#c93c38" size=4></td><td><hr color="#3f3d81" size=4></td><td><hr color="#3f3d81" size=4></td><td><hr color="#3f3d81" size=4></td><td><hr color="#6f6da5" size=4></td></tr>
212 <tr>
213 <td style="width:100px;">&nbsp</td><td>&nbsp</td>
214 <td class="index">63</td><td class="index">.</td><td>.</td><td class="index">.</td><td class="index">.</td><td class="index">.</td><td class="index">.</td><td class="index">70</td><td class="index">.</td><td class="index">.</td><td class="index">.</td><td class="index">.</td><td>.</td><td class="index">.</td><td class="index">.</td><td class="index">.</td><td class="index">.</td><td class="index">80</td><td class="index">.</td><td class="index">.</td><td class="index">.</td><td class="index">.</td><td>.</td><td class="index">.</td><td class="index">.</td><td class="index">.</td><td class="index">.</td><td class="index">90</td><td class="index">.</td><td class="index">.</td><td class="index">.</td><td class="index">.</td><td>.</td><td class="index">.</td><td class="index">.</td><td class="index">.</td><td class="index">.</td><td class="index">100</td><td class="index">.</td><td class="index">.</td><td class="index">.</td><td class="index">.</td><td>.</td><td class="index">.</td><td class="index">.</td><td class="index">.</td></tr>
215 <tr><td>&nbsp</td></tr>
216 </table>
217 <table width=30% border=0><tr>
218 <td style="width:7em;" class="darkshadelalig">Download:</td><td class="midshade"><a href="c2mj3A_.34.alig.txt">Text version</a></td>
219 <td class="midshade"><a href="http://www.sbg.bio.ic.ac.uk/phyre2/webscripts/genfasta.cgi?jobid=56da5616b4559c93&rank=34">FASTA version</a></td>
220 </tr></table><p>No model constructed - rank, confidence too low</p>
221 <br><br><center><hr width=95%> 
222 <p>Phyre is for <font color=red>non-commercial use</font> only</p>
223 <p>Commercial users please contact <a href="mailto:m.sternberg@imperial.ac.uk">Michael Sternberg</a></p>
224 <table width=60% border=0>
225 <tr align=center><td colspan=3><font size=-1><b>Please cite:</b> The Phyre2 web portal for protein modeling, prediction and analysis</font></td></tr> 
226
227 <tr align=center><td colspan=3><font size=-1>Kelley LA <i>et al.</i> <i>Nature Protocols</i>
228 10, 845-858 (2015)
229       [<a href="http://www.nature.com/nprot/journal/v10/n6/full/nprot.2015.053.html">paper</a>]
230       [<a href="http://www.nature.com/nprot/journal/v10/n6/ris/nprot.2015.053.ris">Citation
231         link</a>]</font></td></tr> 
232 <tr><td colspan=3>&nbsp</td></tr>
233 <tr><td align=center>
234
235 <table border=0> 
236
237 <tr><td><font size=-2>&copy <a href="http://www.sbg.bio.ic.ac.uk">Structural Bioinformatics Group</a>, Imperial College, London</td></tr> 
238
239 <tr><td><font size=-2><a
240 href="http://www.sbg.bio.ic.ac.uk/people/kelley/kelley.html">Lawrence
241 Kelley</a>, <a href="http://www.imperial.ac.uk/people/m.sternberg">Michael Sternberg</a></td><td>&nbsp</td></tr> 
242 <tr>
243 <td><font size=-2><a href="http://www.sbg.bio.ic.ac.uk/phyre2/html/page.cgi?id=disclaimer">Disclaimer</a></font></td></tr>
244 <tr>
245 <td><font size=-2><a href="http://www.sbg.bio.ic.ac.uk/phyre2/html/page.cgi?id=terms_conditions">Terms and Conditions</a></font></td>
246 </tr></table> 
247
248 </td>
249 <td align=center><a class="logo" href="http://www.elixir-uk.org"><img src="http://www.sbg.bio.ic.ac.uk/phyre2/html/images/Elixir_logo_small.png"></a></td>
250 <td align=center> 
251 <table class="sbgic" bgcolor=white><tr><td><img src="http://www.sbg.bio.ic.ac.uk/phyre/html/sbg_small.gif"> 
252 <img src="http://www.sbg.bio.ic.ac.uk/phyre/html/imperial_logo.gif"> 
253 </td></tr> 
254 <tr><td><img src="http://www.sbg.bio.ic.ac.uk/phyre2/html/images/bbsrc.gif"><br>Phyre2 is part of <b><a href="http://genome3d.eu/">Genome3D</a></b></td></tr>
255 </table></td></tr>
256 </table> 
257 <br><br>
258 </body></html>
259 <script>
260 var isiPad = navigator.userAgent.match(/iPad/i) != null;
261
262 // For use within iPad developer UIWebView
263 // Thanks to Andrew Hedges!
264 var ua = navigator.userAgent;
265 var isiPad = /iPad/i.test(ua) || /iPhone OS 3_1_2/i.test(ua) || /iPhone OS 3_2_2/i.test(ua);
266
267       function ChangeCSSRule(xElement,xValue) {
268         var strCSS = 'cssRules';
269 if(document.all) {
270            strCSS = 'rules';
271         }
272         document.styleSheets[0][strCSS][0].style[xElement] = xValue;
273       }
274 if(isiPad){
275 ChangeCSSRule('display','none');
276 document.body.style.zoom = "50%";
277 }
278 </script>
279