JAL-3035 more das bits removed
[jalview.git] / resources / lang / Messages.properties
1 action.refresh_services = Refresh Services
2 action.reset_services = Reset Services
3 action.merge_results = Merge Results
4 action.load_scheme = Load scheme
5 action.save_scheme = Save scheme
6 label.scheme_changed = Changes to scheme ''{0}'' have not been saved.<br><br>Save changes, or continue without saving to make a new colour scheme.
7 label.save_changes = Save Changes
8 label.dont_save_changes = Don't Save
9 action.save_image = Save Image
10 action.paste = Paste
11 action.show_html_source = Show HTML Source
12 action.print = Print...
13 action.web_service = Web Service
14 action.cancel_job = Cancel Job
15 action.start_job = Start Job
16 action.revert = Revert
17 action.move_down = Move Down
18 action.move_up = Move Up
19 action.remove_return_datatype = Remove return datatype
20 action.add_return_datatype = Add return datatype
21 action.remove_input_parameter = Remove selected input parameter
22 action.add_input_parameter = Add input parameter
23 action.edit = Edit
24 action.new = New
25 action.open_file = Open file
26 action.show_unconserved = Show Unconserved
27 action.open_new_alignment = Open new alignment
28 action.raise_associated_windows = Raise Associated Windows
29 action.minimize_associated_windows = Minimize Associated Windows
30 action.close_all = Close all
31 action.load_project = Load Project
32 action.save_project = Save Project
33 action.quit = Quit
34 action.expand_views = Expand Views
35 action.gather_views = Gather Views
36 action.page_setup = Page Setup...
37 action.reload = Reload
38 action.load = Load
39 action.open = Open
40 action.cancel = Cancel
41 action.create = Create
42 action.update = Update
43 action.delete = Delete
44 action.clear = Clear
45 action.accept = Accept
46 action.select_ddbb = --- Select Database ---
47 action.undo = Undo
48 action.redo = Redo
49 action.reset = Reset
50 action.remove_left = Remove left
51 action.remove_right = Remove right
52 action.remove_empty_columns = Remove Empty Columns
53 action.remove_all_gaps = Remove All Gaps
54 action.left_justify_alignment = Left Justify Alignment
55 action.right_justify_alignment = Right Justify Alignment
56 action.boxes = Boxes
57 action.text = Text
58 action.by_pairwise_id = By Pairwise Identity
59 action.by_id = By Id
60 action.by_length = By Length
61 action.by_group = By Group
62 action.unmark_as_reference = Unmark as Reference 
63 action.set_as_reference = Set as Reference 
64 action.remove = Remove
65 action.remove_redundancy = Remove Redundancy...
66 action.pairwise_alignment = Pairwise Alignment
67 action.user_defined = User Defined...
68 action.by_conservation = By Conservation
69 action.wrap = Wrap
70 action.show_gaps = Show Gaps
71 action.show_hidden_markers = Show Hidden Markers
72 action.find = Find
73 action.undefine_groups = Undefine Groups
74 action.make_groups_selection = Make Groups For Selection
75 action.copy = Copy
76 action.cut = Cut
77 action.font = Font...
78 action.scale_above = Scale Above
79 action.scale_left = Scale Left
80 action.scale_right = Scale Right
81 action.by_tree_order = By Tree Order
82 action.sort = Sort
83 action.calculate_tree = Calculate Tree...
84 action.calculate_tree_pca = Calculate Tree or PCA...
85 action.help = Help
86 action.by_annotation = By Annotation...
87 action.invert_sequence_selection = Invert Sequence Selection
88 action.invert_column_selection = Invert Column Selection
89 action.show = Show
90 action.hide = Hide
91 action.ok = OK
92 action.set_defaults = Defaults
93 action.create_group = Create Group
94 action.remove_group = Remove Group
95 action.edit_group = Edit Group
96 action.border_colour = Border colour
97 action.edit_new_group = Edit New Group
98 action.hide_sequences = Hide Sequences
99 action.sequences = Sequences
100 action.ids = IDS
101 action.ids_sequences = IDS and sequences
102 action.reveal_all = Reveal All
103 action.reveal_sequences = Reveal Sequences
104 action.find_all = Find all
105 action.find_next = Find next
106 action.file = File
107 action.view = View
108 action.annotations = Annotations
109 action.change_params = Change Parameters
110 action.apply = Apply
111 action.apply_threshold_all_groups = Apply threshold to all groups
112 action.apply_all_groups = Apply to all Groups
113 action.by_chain = By Chain
114 action.by_sequence = By Sequence
115 action.paste_annotations = Paste Annotations
116 action.format = Format
117 action.select = Select
118 action.new_view = New View
119 action.close = Close
120 action.add = Add
121 action.save_as = Save as...
122 action.save = Save
123 action.change_font = Change Font
124 action.change_font_tree_panel = Change Font (Tree Panel)
125 action.colour = Colour
126 action.calculate = Calculate
127 action.select_all = Select all
128 action.select_highlighted_columns = Select Highlighted Columns
129 tooltip.select_highlighted_columns = Press B to mark highlighted columns, Ctrl-(or Cmd)-B to toggle, and Alt-B to mark all but highlighted columns 
130 action.deselect_all = Deselect all
131 action.invert_selection = Invert selection
132 action.using_jmol = Using Jmol
133 action.link = Link
134 action.group_link = Group Link
135 action.show_chain = Show Chain
136 action.show_group = Show Group
137 action.fetch_db_references = Fetch DB References
138 action.view_flanking_regions = Show flanking regions
139 label.view_flanking_regions = Show sequence data either side of the subsequences involved in this alignment
140 label.structures_manager = Structures Manager
141 label.url = URL
142 label.url\: = URL:
143 label.input_file_url = Enter URL or Input File
144 label.select_feature = Select feature
145 label.name = Name
146 label.name\: = Name:
147 label.name_param = Name: {0}
148 label.group = Group
149 label.group\: = Group:
150 label.group_name = Group Name
151 label.group_description = Group Description
152 label.edit_group_name_description = Edit Group Name/Description
153 label.colour = Colour:
154 label.description = Description
155 label.description\: = Description:
156 label.start = Start:
157 label.end = End:
158 label.current_parameter_set_name = Current parameter set name:
159 label.service_action = Service Action:
160 label.post_url = POST URL:
161 label.url_suffix = URL Suffix
162 label.per_seq = per Sequence
163 label.result_vertically_separable = Results are vertically separable
164 label.amend = Amend
165 label.undo_command = Undo {0}
166 label.redo_command = Redo {0}
167 label.principal_component_analysis = Principal Component Analysis
168 label.average_distance_identity = Average Distance Using % Identity
169 label.neighbour_joining_identity = Neighbour Joining Using % Identity
170 label.choose_calculation = Choose Calculation
171 label.treecalc_title = {0} Using {1}
172 label.tree_calc_av = Average Distance
173 label.tree_calc_nj = Neighbour Joining
174 label.select_score_model = Select score model
175 label.score_model_pid = % Identity
176 label.score_model_blosum62 = BLOSUM62
177 label.score_model_pam250 = PAM 250
178 label.score_model_smithwatermanscore = Score between two sequences aligned with Smith-Waterman with default Peptide/Nucleotide matrix
179 label.score_model_sequencefeaturesimilarity = Distance measure of average number of features not shared at sequence positions 
180 label.score_model_conservation = Physicochemical property conservation
181 label.score_model_enhconservation = Physicochemical property conservation
182 label.status_bar = Status bar
183 label.out_to_textbox = Output to Textbox
184 label.occupancy = Occupancy
185 # delete Clustal - use FileFormat name instead
186 label.clustal = Clustal
187 # label.colourScheme_<schemeName> as in JalviewColourScheme
188 label.colourScheme_clustal = Clustalx
189 label.colourScheme_blosum62 = BLOSUM62 Score
190 label.colourScheme_%_identity = Percentage Identity
191 label.colourScheme_zappo = Zappo
192 label.colourScheme_taylor = Taylor
193 label.colourScheme_hydrophobic = Hydrophobicity
194 label.colourScheme_helix_propensity = Helix Propensity
195 label.colourScheme_strand_propensity = Strand Propensity
196 label.colourScheme_turn_propensity = Turn Propensity
197 label.colourScheme_buried_index = Buried Index
198 label.colourScheme_purine/pyrimidine = Purine/Pyrimidine
199 label.colourScheme_nucleotide = Nucleotide
200 label.colourScheme_t-coffee_scores = T-Coffee Scores
201 label.colourScheme_rna_helices = By RNA Helices
202 label.blc = BLC
203 label.fasta = Fasta
204 label.msf = MSF
205 label.pfam = PFAM
206 label.pileup = Pileup
207 label.pir = PIR
208 label.average_distance_blosum62 = Average Distance Using BLOSUM62
209 label.neighbour_blosum62 = Neighbour Joining Using BLOSUM62
210 label.show_annotations = Show annotations
211 label.hide_annotations = Hide annotations
212 label.show_all_seq_annotations = Show sequence related
213 label.hide_all_seq_annotations = Hide sequence related
214 label.show_all_al_annotations = Show alignment related
215 label.hide_all_al_annotations = Hide alignment related
216 label.hide_all = Hide all
217 label.add_reference_annotations = Add reference annotations
218 label.find_tip = Search alignment, selection or sequence ids for a subsequence (ignoring gaps).<br>Accepts regular expressions - search Help for 'regex' for details.
219 label.colour_text = Colour Text
220 label.show_non_conserved = Show nonconserved
221 label.overview_window = Overview Window
222 label.none = None
223 label.above_identity_threshold = Above Identity Threshold
224 label.show_sequence_features = Show Sequence Features
225 label.nucleotide = Nucleotide
226 label.protein = Protein
227 label.nucleotides = Nucleotides
228 label.proteins = Proteins
229 label.to_new_alignment = To New Alignment
230 label.to_this_alignment = Add To This Alignment
231 label.apply_colour_to_all_groups = Apply Colour To All Groups
232 label.modify_identity_threshold = Modify Identity Threshold...
233 label.modify_conservation_threshold = Modify Conservation Threshold...
234 label.input_from_textbox = Input from textbox
235 label.centre_column_labels = Centre column labels
236 label.automatic_scrolling = Automatic Scrolling
237 label.documentation = Documentation
238 label.about = About...
239 label.show_sequence_limits = Show Sequence Limits
240 action.feature_settings = Feature Settings...
241 label.all_columns = All Columns
242 label.all_sequences = All Sequences
243 label.selected_columns = Selected Columns 
244 label.selected_sequences = Selected Sequences
245 label.except_selected_sequences = All except selected sequences
246 label.all_but_selected_region = All but Selected Region (Shift+Ctrl+H)
247 label.selected_region = Selected Region
248 label.all_sequences_columns = All Sequences and Columns
249 label.hide_selected_annotations = Hide selected annotations
250 label.show_selected_annotations = Show selected annotations
251 label.group_consensus = Group Consensus
252 label.group_conservation = Group Conservation
253 label.show_consensus_histogram = Show Consensus Histogram
254 label.show_consensus_logo = Show Consensus Logo
255 label.norm_consensus_logo = Normalise Consensus Logo
256 label.apply_all_groups = Apply to all groups
257 label.autocalculated_annotation = Autocalculated Annotation
258 label.show_first = Show first
259 label.show_last = Show last
260 label.struct_from_pdb = Process secondary structure from PDB
261 label.use_rnaview = Use RNAView for secondary structure
262 label.autoadd_secstr = Add secondary structure annotation to alignment
263 label.autoadd_temp = Add Temperature Factor annotation to alignment
264 label.structure_viewer = Default structure viewer
265 label.double_click_to_browse = Double-click to browse for file
266 label.chimera_path = Path to Chimera program
267 label.chimera_path_tip = Jalview will first try any path entered here, else standard installation locations.<br>Double-click to browse for file.
268 label.invalid_chimera_path = Chimera path not found or not executable
269 label.chimera_missing = Chimera structure viewer not found.<br/>Please enter the path to Chimera (if installed),<br/>or download and install UCSF Chimera.
270 label.chimera_failed = Error opening Chimera - is it installed?\nCheck path in Preferences, Structure
271 label.min_colour = Minimum Colour
272 label.max_colour = Maximum Colour
273 label.no_colour = No Colour
274 label.use_original_colours = Use Original Colours
275 label.threshold_minmax = Threshold is min/max
276 label.represent_group_with = Represent Group with {0}
277 label.selection = Selection
278 label.group_colour = Group Colour
279 label.sequence = Sequence
280 label.view_pdb_structure = View PDB Structure
281 label.min_value = Min value
282 label.max_value = Max value
283 label.no_value = No value
284 label.new_feature = New Feature
285 label.match_case = Match Case
286 label.view_alignment_editor = View in alignment editor
287 label.labels = Labels
288 label.output_values = Output Values...
289 label.output_points = Output points...
290 label.output_transformed_points = Output transformed points
291 label.input_data = Input Data...
292 label.nucleotide_matrix = Nucleotide matrix
293 label.protein_matrix = Protein matrix
294 label.show_bootstrap_values = Show Bootstrap Values
295 label.show_distances = Show distances
296 label.mark_unassociated_leaves = Mark Unassociated Leaves
297 label.fit_to_window = Fit To Window
298 label.newick_format = Newick Format
299 label.select_newick_like_tree_file = Select a newick-like tree file
300 label.colours = Colours
301 label.view_mapping = View Mapping
302 label.wireframe = Wireframe
303 label.depthcue = Depthcue
304 label.z_buffering = Z Buffering
305 label.charge_cysteine = Charge & Cysteine
306 label.all_chains_visible = All Chains Visible
307 label.successfully_added_features_alignment = Successfully added features to alignment
308 label.keyboard_editing_mode = Keyboard editing mode is {0}
309 label.paste_features_annotations_Tcoffee_here = Paste your features / annotations / T-coffee score file here.
310 label.removed_columns = Removed {0} columns.
311 label.removed_empty_columns = Removed {0} empty columns.
312 label.paste_newick_tree_file = Paste your Newick tree file here.
313 label.order_by_params = Order by {0}
314 label.html_content = <html>{0}</html>
315 label.paste_pdb_file= Paste your PDB file here.
316 label.paste_pdb_file_for_sequence = Paste PDB file for sequence {0}
317 label.could_not_parse_newick_file  = Could not parse Newick file\!\n {0}
318 label.successfully_pasted_tcoffee_scores_to_alignment= Successfully pasted T-Coffee scores to alignment.
319 label.failed_add_tcoffee_scores = Failed to add T-Coffee scores: 
320 label.successfully_pasted_annotation_to_alignment= Successfully pasted annotation to alignment.
321 label.couldnt_parse_pasted_text_as_valid_annotation_feature_GFF_tcoffee_file = Couldn't parse pasted text as a valid annotation, feature, GFF, or T-Coffee score file
322 label.successfully_pasted_alignment_file = Successfully pasted alignment file
323 label.paste_your_alignment_file = Paste your alignment file here
324 label.paste_your = Paste your
325 label.finished_searching = Finished searching
326 label.search_results= Search results {0} : {1}
327 label.found_match_for = Found match for {0}
328 label.font = Font:
329 label.size = Size:
330 label.style = Style:
331 label.calculating = Calculating....
332 label.modify_conservation_visibility = Modify conservation visibility
333 label.colour_residues_above_occurrence = Colour residues above % occurrence
334 label.set_this_label_text = set this label text
335 label.sequences_from = Sequences from {0}
336 label.successfully_loaded_file  = Successfully loaded file {0}
337 label.successfully_loaded_matrix  = Successfully loaded score matrix {0}
338 label.successfully_saved_to_file_in_format = Successfully saved to file: {0} in {1} format.
339 label.copied_sequences_to_clipboard = Copied {0} sequences to clipboard.
340 label.check_file_matches_sequence_ids_alignment = Check that the file matches sequence IDs in the alignment.
341 label.problem_reading_tcoffee_score_file = Problem reading T-COFFEE score file
342 label.source_to_target = {0} ... {1}
343 label.per_sequence_only= Per-sequence only
344 label.to_file = to File
345 label.to_textbox = to Textbox
346 label.jalview = Jalview
347 label.csv_spreadsheet = CSV (Spreadsheet)
348 label.status = Status
349 label.channels = Channels
350 label.channel_title_item_count = {0} ({1})
351 label.blog_item_published_on_date = {0} {1} 
352 label.session_update = Session Update
353 label.new_vamsas_session = New Vamsas Session
354 action.load_vamsas_session = Load Vamsas Session...
355 action.save_vamsas_session = Save Vamsas Session
356 label.select_vamsas_session_opened_as_new_vamsas_session= Select a vamsas session to be opened as a new vamsas session.
357 label.open_saved_vamsas_session = Open a saved VAMSAS session
358 label.groovy_console = Groovy Console...
359 label.lineart = Lineart
360 label.dont_ask_me_again = Don't ask me again
361 label.select_eps_character_rendering_style = Select EPS character rendering style
362 label.invert_selection = Invert Selection
363 label.optimise_order = Optimise Order
364 label.seq_sort_by_score = Sequence sort by Score
365 label.load_colours = Load Colours
366 label.save_colours = Save Colours
367 label.load_colours_tooltip = Load feature colours and filters from file
368 label.save_colours_tooltip = Save feature colours and filters to file
369 label.selected_database_to_fetch_from = Selected {0} database {1} to fetch from {2} 
370 label.database_param = Database: {0}
371 label.example = Example
372 label.example_param = Example: {0}
373 label.select_file_format_before_saving = You must select a file format before saving!
374 label.file_format_not_specified = File format not specified
375 label.couldnt_save_file = Couldn't save file: {0}
376 label.error_saving_file = Error Saving File
377 label.remove_from_default_list = Remove from default list?
378 label.remove_user_defined_colour = Remove user defined colour
379 label.you_must_select_least_two_sequences = You must select at least 2 sequences.
380 label.invalid_selection = Invalid Selection
381 label.sequence_selection_insufficient = Sequence selection insufficient
382 label.you_need_at_least_n_sequences = You need to select at least {0} sequences
383 label.not_enough_sequences = Not enough sequences
384 label.selected_region_to_tree_may_only_contain_residues_or_gaps =  The selected region to create a tree may\nonly contain residues or gaps.\nTry using the Pad function in the edit menu,\nor one of the multiple sequence alignment web services.
385 label.sequences_selection_not_aligned = Sequences in selection are not aligned
386 label.problem_reading_tree_file =  Problem reading tree file
387 label.possible_problem_with_tree_file = Possible problem with tree file
388 label.select_at_least_three_bases_in_at_least_one_sequence_to_cDNA_translation = Please select at least three bases in at least one sequence in order to perform a cDNA translation.
389 label.translation_failed = Translation Failed
390 label.error_when_translating_sequences_submit_bug_report = Unfortunately, something went wrong when translating your sequences.\nPlease take a look in the Jalview java console\nand submit a bug report including the stacktrace.
391 label.implementation_error  = Implementation error:
392 label.automatically_associate_structure_files_with_sequences_same_name = Do you want to automatically associate the {0} structure file(s) with sequences in the alignment that have the same name?
393 label.automatically_associate_structure_files_by_name = Automatically Associate Structure files by name
394 label.ignore_unmatched_dropped_files_info = <html>Do you want to <em>ignore</em> the {0} files whose names did not match any sequence IDs ?</html>
395 label.ignore_unmatched_dropped_files = Ignore unmatched dropped files?
396 label.view_name_original = Original
397 label.enter_view_name = Enter View Name
398 label.enter_label = Enter label
399 label.enter_label_for_the_structure = Enter a label for the structure
400 label.pdb_entries_couldnt_be_retrieved = The following pdb entries could not be retrieved from the PDB\:\n{0}\nPlease retry, or try downloading them manually.
401 label.couldnt_load_file = Couldn't load file
402 label.couldnt_find_pdb_id_in_file = Couldn't find a PDB id in the file supplied. Please enter an Id to identify this structure.
403 label.no_pdb_id_in_file = No PDB Id in File
404 label.couldnt_read_pasted_text = Couldn't read the pasted text {0}
405 label.error_parsing_text = Error parsing text
406 label.input_alignment_from_url = Input Alignment From URL
407 label.input_alignment = Input Alignment
408 label.couldnt_import_as_vamsas_session = Couldn't import {0} as a new vamsas session.
409 label.vamsas_document_import_failed = Vamsas Document Import Failed
410 label.couldnt_locate = Couldn't locate {0}
411 label.url_not_found = URL not found
412 label.new_sequence_url_link = New sequence URL link
413 label.cannot_edit_annotations_in_wrapped_view = Cannot edit annotations in wrapped view
414 label.wrapped_view_no_edit = Wrapped view - no edit
415 label.error_retrieving_data = Error Retrieving Data
416 label.user_colour_scheme_must_have_name = User colour scheme must have a name
417 label.no_name_colour_scheme = No name for colour scheme
418 label.invalid_url = Invalid URL !
419 label.error_loading_file = Error loading file
420 label.problems_opening_file = Encountered problems opening {0}!!
421 label.file_open_error = File open error
422 label.colour_scheme_exists_overwrite = Colour scheme {0} exists.\nContinue saving colour scheme as {1}?"
423 label.duplicate_scheme_name = Duplicate scheme name
424 label.jalview_new_questionnaire = There is a new Questionnaire available. Would you like to complete it now ?\n
425 label.jalview_user_survey = Jalview User Survey
426 label.alignment_properties = Alignment Properties: {0}
427 label.alignment_props = Alignment Properties
428 label.input_cut_paste = Cut & Paste Input
429 label.input_cut_paste_params = Cut & Paste Input - {0}
430 label.alignment_output_command = Alignment output - {0}
431 label.annotations = Annotations
432 label.structure_options = Structure Options
433 label.features = Features
434 label.overview_params = Overview {0}
435 label.paste_newick_file = Paste Newick file
436 label.load_tree_from_file = From File - 
437 label.colour_by_annotation = Colour by Annotation
438 label.selection_output_command = Selection output - {0}
439 label.annotation_for_displayid = <p><h2>Annotation for {0} </h2></p><p>
440 label.pdb_sequence_mapping = PDB - Sequence Mapping
441 label.pca_details = PCA details
442 label.redundancy_threshold_selection = Redundancy threshold selection
443 label.user_defined_colours = User defined colours
444 label.jalviewLite_release = JalviewLite - Release {0}
445 label.jaview_build_date = Build date: {0}
446 label.jalview_authors_1 = Authors: Jim Procter, Andrew Waterhouse, Mungo Carstairs, Tochukwu Ofoegbu, Lauren Lui, Jan Engelhardt,
447 label.jalview_authors_2 = Natasha Sherstnev, Daniel Barton, Michele Clamp, James Cuff, Steve Searle, David Martin & Geoff Barton.
448 label.jalview_dev_managers = Development managed by The Barton Group, University of Dundee, Scotland, UK.
449 label.jalview_distribution_lists = For help, see the FAQ at www.jalview.org and/or join the jalview-discuss@jalview.org mailing list
450 label.jalview_please_cite = If  you use Jalview, please cite:
451 label.jalview_cite_1_authors = Waterhouse, A.M., Procter, J.B., Martin, D.M.A, Clamp, M. and Barton, G. J. (2009)
452 label.jalview_cite_1_title = Jalview Version 2 - a multiple sequence alignment editor and analysis workbench
453 label.jalview_cite_1_ref = Bioinformatics doi: 10.1093/bioinformatics/btp033
454 label.right_click = Right click
455 label.to_add_annotation = to add annotation
456 label.alignment_has_no_annotations = Alignment has no annotations
457 label.retrieving_pdb_data = Retrieving PDB data...
458 label.label = Label
459 label.no_features_added_to_this_alignment = No Features added to this alignment!!
460 label.features_can_be_added_from_searches_1 = (Features can be added from searches or
461 label.features_can_be_added_from_searches_2 = from Jalview / GFF features files)
462 label.calculating_pca= Calculating PCA
463 label.jalview_cannot_open_file = Jalview can't open file
464 label.jalview_applet = Jalview applet
465 label.loading_data = Loading data
466 label.memory_stats = Total Free Memory: {0} MB; Max Memory: {1} MB; {2} %
467 label.calculating_tree = Calculating tree
468 label.state_queueing = queuing
469 label.state_running = running
470 label.state_completed = finished
471 label.state_job_cancelled = job cancelled!!
472 label.state_job_error = job error!
473 label.server_error_try_later = Server Error! (try later)
474 label.error_loading_pdb_data = Error loading PDB data!!
475 label.fetching_pdb_data = Fetching PDB data...
476 label.structure_type = Structure type
477 label.settings_for_type = Settings for {0}
478 label.view_full_application = View in Full Application
479 label.load_associated_tree = Load Associated Tree...
480 label.load_features_annotations = Load Features/Annotations...
481 label.load_vcf = Load SNP variants from plain text or indexed VCF data
482 label.load_vcf_file = Load VCF File
483 label.searching_vcf = Loading VCF variants...
484 label.added_vcf = Added {0} VCF variants to {1} sequence(s)
485 label.export_features = Export Features...
486 label.export_annotations = Export Annotations...
487 label.to_upper_case = To Upper Case
488 label.to_lower_case = To Lower Case
489 label.toggle_case = Toggle Case
490 label.edit_name_description = Edit Name/Description...
491 label.create_sequence_feature = Create Sequence Feature...
492 label.edit_sequence = Edit Sequence
493 label.edit_sequences = Edit Sequences
494 label.sequence_details = Sequence Details
495 label.jmol_help = Jmol Help
496 label.chimera_help = Chimera Help
497 label.close_viewer = Close Viewer
498 label.confirm_close_chimera = This will close Jalview''s connection to {0}.<br>Do you want to close the Chimera window as well?
499 label.all = All
500 label.sort_by = Sort alignment by
501 label.sort_by_score = Sort by Score
502 label.sort_by_density = Sort by Density
503 label.sequence_sort_by_density = Sequence sort by Density
504 label.sort_ann_by = Sort annotations by
505 label.sort_annotations_by_sequence = Sort by sequence
506 label.sort_annotations_by_label = Sort by label
507 label.reveal = Reveal
508 label.hide_columns = Hide Columns
509 label.load_jalview_annotations = Load Jalview Annotations or Features File
510 label.load_tree_file = Load a tree file
511 label.retrieve_parse_sequence_database_records_alignment_or_selected_sequences = Retrieve and parse sequence database records for the alignment or the currently selected sequences
512 label.standard_databases = Standard Databases
513 label.fetch_embl_uniprot = Fetch from EMBL/EMBLCDS or Uniprot/PDB and any selected DAS sources
514 label.reset_min_max_colours_to_defaults = Reset min and max colours to defaults from user preferences.
515 label.align_structures_using_linked_alignment_views = Superpose structures using {0} selected alignment view(s)
516 label.connect_to_session = Connect to session {0}
517 label.threshold_feature_display_by_score = Threshold the feature display by score.
518 label.threshold_feature_no_threshold = No Threshold
519 label.threshold_feature_above_threshold = Above Threshold
520 label.threshold_feature_below_threshold = Below Threshold
521 label.adjust_threshold = Adjust threshold
522 label.toggle_absolute_relative_display_threshold = Toggle between absolute and relative display threshold.
523 label.select_colour_minimum_value = Select Colour for Minimum Value
524 label.select_colour_maximum_value = Select Colour for Maximum Value
525 label.open_url_param = Open URL {0}
526 label.open_url_seqs_param = Open URL ({0}..) ({1} seqs)
527 label.load_pdb_file_associate_with_sequence = Load a PDB file and associate it with sequence {0}
528 label.reveal_hidden_columns = Reveal Hidden Columns with Right Mouse Button
529 label.dark_colour = Dark Colour
530 label.light_colour = Light Colour
531 label.highlightnode = Left click to select leaves.<br>Double-click to invert leaves.<br>Right click to change colour.
532 label.load_colour_scheme = Load colour scheme
533 label.copy_format_from = Copy format from
534 label.toggle_enabled_views = When enabled, allows many views to be selected.
535 label.select_all_views = Select all views
536 label.select_many_views = Select many views
537 label.edit_notes_parameter_set = Click to edit the notes for this parameter set.
538 label.open_local_file = Open local file
539 label.enable_automatically_sort_alignment_when_open_new_tree = Enable this to automatically sort<br>the alignment when you open<br> a new tree.
540 label.listen_for_selections = Listen for selections
541 label.selections_mirror_selections_made_same_sequences_other_views = When selected, selections in this view will mirror<br>selections made on the same sequences in other views.
542 label.toggle_sequence_visibility = Shift+H toggles sequence visiblity
543 label.toggle_columns_visibility = Ctrl+H toggles column visiblity.
544 label.toggles_visibility_hidden_selected_regions = H toggles visibility of hidden or selected regions
545 label.rename_tab_eXpand_reGroup=  Right-click to rename tab <br> Press X to eXpand tabs, G to reGroup.
546 label.right_align_sequence_id = Right Align Sequence Id
547 label.sequence_id_tooltip = Sequence ID Tooltip
548 label.no_services = <No Services>
549 label.select_copy_raw_html = Select this if you want to copy raw html
550 label.share_data_vamsas_applications = Share data with other vamsas applications
551 label.connect_to = Connect to
552 label.join_existing_vamsas_session = Join an existing vamsas session
553 label.from_url = from URL
554 label.any_trees_calculated_or_loaded_alignment_automatically_sort = When selected, any trees calculated or loaded onto the alignment will automatically sort the alignment
555 label.sort_with_new_tree = Sort With New Tree
556 label.from_textbox = from Textbox
557 label.window = Window
558 label.preferences = Preferences
559 label.tools = Tools
560 label.fetch_sequences = Fetch Sequences
561 action.fetch_sequences = Fetch Sequences...
562 label.stop_vamsas_session = Stop Vamsas Session
563 label.collect_garbage = Collect Garbage
564 label.show_memory_usage = Show Memory Usage
565 label.show_java_console = Show Java Console
566 label.show_jalview_news = Show Jalview News
567 label.take_snapshot = Take snapshot
568 label.monospaced_fonts_faster_to_render = Monospaced fonts are faster to render
569 label.anti_alias_fonts = Anti-alias Fonts (Slower to render)
570 label.monospaced_font= Monospaced
571 label.quality = Quality
572 label.maximize_window = Maximize Window
573 label.conservation = Conservation
574 label.consensus = Consensus
575 label.histogram = Histogram
576 label.logo = Logo
577 label.non_positional_features = List Non-positional Features
578 label.database_references = List Database References
579 #label.share_selection_across_views = Share selection across views
580 #label.scroll_highlighted_regions = Scroll to highlighted regions
581 label.gap_symbol = Gap Symbol
582 label.prot_alignment_colour = Protein Alignment Colour
583 label.nuc_alignment_colour = Nucleotide Alignment Colour
584 label.address = Address
585 label.port = Port
586 label.default_browser_unix = Default Browser (Unix)
587 label.send_usage_statistics = Send usage statistics
588 label.check_for_questionnaires = Check for questionnaires
589 label.check_for_latest_version = Check for latest version
590 label.url_linkfrom_sequence_id = URL link from Sequence ID
591 label.use_proxy_server = Use a proxy server
592 label.eps_rendering_style = EPS rendering style
593 label.append_start_end = Append /start-end (/15-380)
594 label.full_sequence_id = Full Sequence Id
595 label.smooth_font = Smooth Font
596 label.autocalculate_consensus = AutoCalculate Consensus
597 label.pad_gaps = Pad Gaps
598 label.pad_gaps_when_editing = Pad Gaps When Editing
599 label.automatically_set_id_width = Automatically set ID width
600 label.figure_id_column_width = Figure ID column width
601 label.use_modeller_output = Use Modeller Output
602 label.wrap_alignment = Wrap Alignment
603 label.right_align_ids = Right Align Ids
604 label.sequence_name_italics = Italic Sequence Ids
605 label.open_overview = Open Overview
606 label.default_colour_scheme_for_alignment = Default Colour Scheme for alignment
607 label.annotation_shading_default = Annotation Shading Default
608 label.default_minimum_colour_annotation_shading = Default Minimum Colour for annotation shading
609 label.default_maximum_colour_annotation_shading = Default Maximum Colour for annotation shading
610 label.visual = Visual
611 label.connections = Connections
612 label.output = Output
613 label.editing = Editing
614 label.web_services = Web Services
615 label.right_click_to_edit_currently_selected_parameter = Right click to edit currently selected parameter.
616 label.let_jmol_manage_structure_colours = Let Jmol manage structure colours
617 label.let_chimera_manage_structure_colours = Let Chimera manage structure colours
618 label.fetch_chimera_attributes = Fetch Chimera attributes
619 label.fetch_chimera_attributes_tip = Copy Chimera attribute to Jalview feature
620 label.marks_leaves_tree_not_associated_with_sequence = Marks leaves of tree not associated with a sequence
621 label.index_web_services_menu_by_host_site = Index web services in menu by the host site
622 label.option_want_informed_web_service_URL_cannot_be_accessed_jalview_when_starts_up = Check this option if you want to be informed<br>when a web service URL cannot be accessed by Jalview<br>when it starts up
623 label.new_service_url = New Service URL
624 label.edit_service_url = Edit Service URL
625 label.delete_service_url = Delete Service URL
626 label.details = Details
627 label.options = Options
628 label.parameters = Parameters
629 label.proxy_server = Proxy Server
630 label.file_output = File Output
631 label.select_input_type = Select input type
632 label.set_options_for_type = Set options for type
633 label.data_input_parameters = Data input parameters
634 label.data_returned_by_service = Data returned by service
635 label.rsbs_encoded_service = RSBS Encoded Service
636 label.parsing_errors = Parsing errors
637 label.simple_bioinformatics_rest_services = Simple Bioinformatics Rest Services
638 label.web_service_discovery_urls = Web Service Discovery URLS
639 label.input_parameter_name = Input Parameter name
640 label.short_descriptive_name_for_service = Short descriptive name for service
641 label.function_service_performs = What kind of function the service performs (e.g. alignment, analysis, search, etc).
642 label.brief_description_service = Brief description of service
643 label.url_post_data_service = URL to post data to service. Include any special parameters needed here
644 label.optional_suffix = Optional suffix added to URL when retrieving results from service
645 label.preferred_gap_character = Which gap character does this service prefer?
646 label.gap_character = Gap character
647 label.move_return_type_up_order= Move return type up order
648 label.move_return_type_down_order= Move return type down order
649 label.update_user_parameter_set = Update this existing user parameter set
650 label.delete_user_parameter_set = Delete the currently selected user parameter set
651 label.create_user_parameter_set = Create a new parameter set with the current settings.
652 label.revert_changes_user_parameter_set = Undo all changes to the current parameter set
653 label.start_job_current_settings = Start Job with current settings
654 label.cancel_job_close_dialog = Close this dialog and cancel job
655 label.input_output = Input/Output
656 label.cut_paste = Cut'n'Paste
657 label.adjusting_parameters_for_calculation = Adjusting parameters for existing Calculation
658 label.2d_rna_structure_line = 2D RNA {0} (alignment)
659 label.2d_rna_sequence_name = 2D RNA - {0}
660 label.edit_name_and_description_current_group = Edit name and description of current group
661 label.from_file = From File
662 label.enter_pdb_id = Enter PDB Id
663 label.enter_pdb_id_tip = Enter PDB Id (or pdbid:chaincode)
664 label.text_colour = Text Colour...
665 label.structure = Structure
666 label.show_pdbstruct_dialog = 3D Structure Data...
667 label.view_rna_structure = VARNA 2D Structure
668 label.create_sequence_details_report_annotation_for = Annotation for {0}
669 label.sequence_details_for = Sequence Details for {0}
670 label.sequence_name = Sequence Name
671 label.sequence_description = Sequence Description
672 label.edit_sequence_name_description = Edit Sequence Name/Description
673 label.spaces_converted_to_backslashes = Spaces have been converted to _
674 label.no_spaces_allowed_sequence_name = No spaces allowed in Sequence Name
675 label.select_outline_colour = Select Outline Colour
676 label.web_browser_not_found_unix = Unixers\: Couldn't find default web browser.\nAdd the full path to your browser in Preferences."
677 label.web_browser_not_found = Web browser not found
678 label.select_pdb_file_for = Select a PDB file for {0}
679 label.html = HTML
680 label.wrap = Wrap
681 label.show_database_refs = Show Database Refs
682 label.show_non_positional_features = Show Non-Positional Features
683 label.save_png_image = Save As PNG Image
684 label.load_tree_for_sequence_set = Load a tree for this sequence set
685 label.export_image = Export Image
686 label.vamsas_store = VAMSAS store
687 label.translate_cDNA = Translate as cDNA
688 label.reverse = Reverse
689 label.reverse_complement = Reverse Complement
690 label.linked_view_title = Linked CDS and protein view
691 label.extract_scores = Extract Scores
692 label.get_cross_refs = Get Cross-References
693 label.sort_alignment_new_tree = Sort Alignment With New Tree
694 label.add_sequences = Add Sequences
695 label.new_window = New Window
696 label.split_window = Split Window
697 label.set_as_default = Set as Default
698 label.show_labels = Show labels
699 action.background_colour = Background Colour...
700 label.associate_nodes_with = Associate Nodes With
701 label.link_name = Link Name
702 label.pdb_file = PDB file
703 label.colour_with_jmol = Colour with Jmol
704 label.colour_with_chimera = Colour with Chimera
705 label.superpose_structures = Superpose Structures
706 error.superposition_failed = Superposition failed: {0}
707 label.insufficient_residues = Not enough aligned residues ({0}) to perform superposition
708 label.jmol = Jmol
709 label.chimera = Chimera
710 label.create_chimera_attributes = Write Jalview features
711 label.create_chimera_attributes_tip = Set Chimera residue attributes for visible features
712 label.attributes_set = {0} attribute values set on Chimera
713 label.sort_alignment_by_tree = Sort Alignment By Tree
714 label.mark_unlinked_leaves = Mark Unlinked Leaves
715 label.associate_leaves_with = Associate Leaves With
716 label.save_colour_scheme_with_unique_name_added_to_colour_menu = Save your colour scheme with a unique name and it will be added to the Colour menu
717 label.case_sensitive = Case Sensitive
718 label.lower_case_colour = Colour All Lower Case
719 label.lower_case_tip = Chosen colour applies to all lower case symbols
720 label.index_by_host = Index by Host
721 label.index_by_type = Index by Type
722 label.enable_jabaws_services = Enable JABAWS Services
723 label.display_warnings = Display Warnings
724 label.move_url_up = Move URL Up
725 label.move_url_down = Move URL Down
726 label.add_sbrs_definition = Add a SBRS Definition
727 label.edit_sbrs_definition = Edit SBRS Definition
728 label.delete_sbrs_definition = Delete SBRS Definition
729 label.your_sequences_have_been_verified = Your sequences have been verified against known sequence databases.\n(Use Calculate | Show flanking regions to show enclosing sequence.)\nTo preserve data changes, save your alignment.\n\n
730 label.sequences_updated = Sequences updated
731 label.dbref_search_completed = DBRef search completed
732 label.fetch_all_param = Fetch all {0}
733 label.paste_new_window = Paste To New Window
734 label.settings_for_param = Settings for {0}
735 label.view_params = View {0}
736 label.aacon_calculations = AACon Calculations
737 label.aacon_settings = Change AACon Settings...
738 tooltip.aacon_calculations = When checked, AACon calculations are updated automatically.
739 tooltip.aacon_settings = Modify settings for AACon calculations.
740 label.rnalifold_calculations = RNAAliFold Prediction
741 label.rnalifold_settings = Change RNAAliFold settings...
742 tooltip.rnalifold_calculations = When checked, RNA secondary structure predictions will be calculated for the alignment, and updated when edits are made.
743 tooltip.rnalifold_settings = Modify settings for the RNAAliFold prediction. Use this to hide or show different results of the RNA calculation, and change RNA folding parameters.
744 label.all_views = All Views
745 label.align_sequences_to_existing_alignment = Align sequences to an existing alignment
746 label.realign_with_params = Realign with {0}
747 label.calcname_with_default_settings = {0} with Defaults
748 label.action_with_default_settings = {0} with default settings
749 label.edit_settings_and_run = Edit settings and run...
750 label.view_and_change_parameters_before_alignment = View and change the parameters before alignment
751 label.run_with_preset_params = Run {0} with preset
752 label.view_and_change_parameters_before_running_calculation = View and change parameters before running calculation
753 label.view_documentation = View documentation
754 label.select_return_type = Select return type
755 label.translation_of_params = Translation of {0}
756 label.features_for_params = Features for - {0}
757 label.annotations_for_params = Annotations for - {0}
758 label.generating_features_for_params = Generating features for - {0}
759 label.generating_annotations_for_params = Generating annotations for - {0}
760 label.varna_params = VARNA - {0}
761 label.sequence_feature_settings = Sequence Feature Settings
762 label.pairwise_aligned_sequences = Pairwise Aligned Sequences
763 label.original_data_for_params = Original Data for {0}
764 label.points_for_params = Points for {0}
765 label.transformed_points_for_params = Transformed points for {0}
766 label.variable_color_for = Variable Feature Colour for {0}
767 label.select_background_colour = Select Background Colour
768 label.invalid_font = Invalid Font
769 label.separate_multiple_accession_ids = Enter one or more accession IDs separated by a semi-colon ";"
770 label.separate_multiple_query_values = Enter one or more {0}s separated by a semi-colon ";"
771 label.search_all = Enter one or more search values separated by a semi-colon ";" (Note: This searches the entire database)
772 label.replace_commas_semicolons = Replace commas with semi-colons
773 label.parsing_failed_syntax_errors_shown_below_param = Parsing failed. Syntax errors shown below {0}
774 label.parsing_failed_unrecoverable_exception_thrown_param = \nParsing failed. An unrecoverable exception was thrown\:\n {0}
775 label.example_query_param = Example query: {0}
776 label.enter_value_increase_conservation_visibility = Enter value to increase conservation visibility
777 label.enter_percentage_identity_above_which_colour_residues = Enter % identity above which to colour residues
778 label.wswublast_client_credits = To display sequence features an exact Uniprot id with 100% sequence identity match must be entered.\nIn order to display these features, try changing the names of your sequences to the ids suggested below.\n\nRunning WSWUBlast at EBI.\nPlease quote Pillai S., Silventoinen V., Kallio K., Senger M., Sobhany S., Tate J., Velankar S., Golovin A., Henrick K., Rice P., Stoehr P., Lopez R.\nSOAP-based services provided by the European Bioinformatics Institute.\nNucleic Acids Res. 33(1)\:W25-W28 (2005));
779 label.blasting_for_unidentified_sequence = BLASTing for unidentified sequences
780 label.select_columns_containing = Select columns containing
781 label.select_columns_not_containing = Select columns that do not contain
782 label.hide_columns_containing = Hide columns containing
783 label.hide_columns_not_containing = Hide columns that do not contain
784 option.trim_retrieved_seqs = Trim retrieved sequences
785 label.trim_retrieved_sequences = When the reference sequence is longer than the sequence that you are working with, only keep the relevant subsequences.
786 label.use_sequence_id_1 = Use $DB_ACCESSION$ or $DB_ACCESSION=/<regex>/=$
787 label.use_sequence_id_2 = to embed accession id in URL
788 label.use_sequence_id_3 = Use $SEQUENCE_ID$ similarly to embed sequence id
789 label.use_sequence_id_4 = 
790 label.ws_parameters_for = Parameters for {0}
791 label.switch_server = Switch server
792 label.choose_jabaws_server = Choose a server for running this service
793 label.services_at = Services at {0}
794 label.rest_client_submit = {0} using {1}
795 label.fetch_retrieve_from =Retrieve from {0}</html>
796 label.fetch_retrieve_from_all_sources = Retrieve from all {0} sources in {1}<br>First is :{2}<html> 
797 label.feature_settings_click_drag = Drag up or down to change render order.<br/>Double click to select columns containing feature.
798 label.transparency_tip = Adjust transparency to 'see through' feature colours.
799 label.opt_and_params_further_details = see further details by right-clicking
800 label.opt_and_params_show_brief_desc_image_link = <html>Click to show brief description<br><img src="{0}"/> Right click for further information.</html> 
801 label.opt_and_params_show_brief_desc = <html>Click to show brief description<br></html>
802 label.adjusts_width_generated_eps_png = <html>Adjusts the width of the generated EPS or PNG file to ensure even the longest sequence ID or annotation label is displayed</html>
803 label.manually_specify_width_left_column = <html>Manually specify the width of the left hand column where sequence IDs and annotation labels will be rendered in exported alignment figures. This setting will be ignored if 'Automatically set ID width' is set</html>
804 label.job_created_when_checked = <html>When checked, a job is created for every sequence in the current selection.</html>
805 label.when_checked_job_visible_region_and_results = <html>When checked, a single job is created for the visible region and results mapped back onto their location in the alignment. Otherwise, a job would be created for every contiguous region visible in the alignment or current selection (e.g. a multiple alignment).</html>
806 label.flat_file_representation = <html>Flat file representation of this rest service using the Really Simple Bioinformatics Service formalism</html>
807 label.result_of_parsing_rsbs = <html>Results of parsing the RSBS representation</html>
808 label.user_preset = User Preset
809 label.service_preset = Service Preset
810 label.run_with_preset = Run {0} with preset
811 label.view_service_doc_url = <html>View <a href="{0}">{1}</a></html>
812 action.by_title_param = By {0}
813 label.source_from_db_source = Sources from {0}
814 label.from_msname = from {0}
815 label.superpose_with = Superpose with
816 label.scale_label_to_column = Scale Label to Column
817 label.add_new_row = Add New Row
818 label.edit_label_description = Edit Label/Description
819 label.hide_row = Hide This Row
820 label.delete_row = Delete This Row
821 label.show_all_hidden_rows = Show All Hidden Rows
822 label.export_annotation = Export Annotation
823 label.copy_consensus_sequence = Copy Consensus Sequence
824 label.helix = Helix
825 label.sheet = Sheet
826 label.rna_helix = RNA Helix
827 label.remove_annotation = Remove Annotation
828 label.colour_by = Colour by...
829 label.muscle_multiple_protein_sequence_alignment = Muscle Multiple Protein Sequence Alignment
830 label.mafft_multiple_sequence_alignment = MAFFT Multiple Sequence Alignment
831 label.clustalw_multiple_sequence_alignment = ClustalW Multiple Sequence Alignment
832 label.jnet_secondary_structure_prediction = JPred Secondary Structure Prediction
833 label.multiharmony = Multi-Harmony
834 label.unable_start_web_service_analysis = Unable to start web service analysis
835 label.job_couldnt_be_started_check_input = The Job couldn't be started. Please check your input, and the Jalview console for any warning messages.
836 label.prompt_each_time = Prompt each time
837 label.couldnt_save_project = Couldn't save project
838 label.error_whilst_saving_current_state_to = Error whilst saving current state to {0}
839 label.error_whilst_loading_project_from = Error whilst loading project from {0}
840 label.couldnt_load_project = Couldn't load project
841 label.invalid_name_preset_exists = Invalid name - preset already exists.
842 label.invalid_name = Invalid name
843 label.set_proxy_settings = Please set up your proxy settings in the 'Connections' tab of the Preferences window
844 label.proxy_authorization_failed = Proxy Authorization Failed
845 label.internal_jalview_error = Internal Jalview Error
846 label.secondary_structure_prediction_service_couldnt_be_located = The Secondary Structure Prediction Service named {0} at {1} couldn't be located.
847 label.service_called_is_not_msa_service = The Service called \n{0}\nis not a \nMultiple Sequence Alignment Service\!
848 label.msa_service_is_unknown = The Multiple Sequence Alignment Service named {0} is unknown
849 label.service_called_is_not_seq_search_service = The Service called \n{0}\nis not a \nSequence Search Service\!
850 label.seq_search_service_is_unknown = The Sequence Search Service named {0} is unknown
851 label.feature_type = Feature Type
852 label.show = Show
853 label.service_url = Service URL
854 label.copied_sequences = Copied sequences
855 label.cut_sequences = Cut Sequences
856 label.conservation_colour_increment = Conservation Colour Increment ({0})
857 label.percentage_identity_threshold = Percentage Identity Threshold ({0})
858 label.error_unsupported_owwner_user_colour_scheme = Unsupported owner for User Colour scheme dialog
859 label.save_alignment_to_file = Save Alignment to file
860 label.save_features_to_file = Save Features to File
861 label.save_annotation_to_file = Save Annotation to File
862 label.save_pdb_file = Save PDB File
863 label.save_text_to_file = Save Text to File
864 label.save_state = Save State
865 label.restore_state = Restore State
866 label.saving_jalview_project = Saving jalview project {0}
867 label.loading_jalview_project = Loading jalview project {0}
868 label.save_vamsas_document_archive = Save Vamsas Document Archive
869 label.saving_vamsas_doc = Saving VAMSAS Document to {0}
870 label.load_feature_colours = Load Feature Colours
871 label.save_feature_colours = Save Feature Colour Scheme
872 label.select_startup_file = Select startup file
873 label.select_default_browser = Select default web browser
874 label.save_tree_as_newick = Save tree as newick file
875 label.create_eps_from_tree = Create EPS file from tree
876 label.create_png_from_tree = Create PNG image from tree
877 label.save_colour_scheme = Save colour scheme
878 label.edit_params_for = Edit parameters for {0}
879 label.choose_filename_for_param_file = Choose a filename for this parameter file
880 label.save_as_html = Save as HTML
881 label.recently_opened = Recently Opened
882 label.blasting_for_unidentified_sequence_jobs_running = BLASTing for unidentified sequences - {0}  jobs running.
883 label.tree = Tree
884 label.tree_from = Tree from {0}
885 label.webservice_job_title = {0} using {1}
886 label.select_visible_region_of = selected {0} region of {1}
887 label.visible = Visible
888 label.select_unselect_visible_regions_from = select and unselected {0} regions from {1}
889 label.visible_region_of = visible region of
890 label.webservice_job_title_on = {0} using {1} on {2}
891 label.updating_vamsas_session = Updating vamsas session
892 label.loading_file = Loading File: {0}
893 label.edit_params = Edit {0}
894 label.as_percentage = As Percentage
895 error.not_implemented = Not implemented
896 error.no_such_method_as_clone1_for = No such method as clone1 for {0}
897 error.null_from_clone1 = Null from clone1!
898 error.not_yet_implemented = Not yet implemented
899 error.unknown_type_dna_or_pep = Unknown Type {0} - dna or pep are the only allowed values.
900 error.implementation_error_dont_know_threshold_annotationcolourgradient = Implementation error: don't know about threshold setting for current AnnotationColourGradient.
901 error.invalid_separator_parameter = Invalid separator parameter - must be non-zero length
902 error.alignment_cigararray_not_implemented = Alignment(CigarArray) not yet implemented
903 error.empty_view_cannot_be_updated = empty view cannot be updated.
904 error.mismatch_between_number_of_sequences_in_block = Mismatch between number of sequences in block {0} ({1}) and the original view ({2})
905 error.padding_not_yet_implemented = Padding not yet implemented
906 error.mismatch_between_visible_blocks_to_update_and_number_of_contigs_in_view = Mismatch between visible blocks to update and number of contigs in view (contigs=0,blocks={0})
907 error.unknown_seq_cigar_operation = Unknown SeqCigar operation {0}
908 error.implementation_bug_parse_cigar_string = Implementation bug in parseCigarString
909 error.implementation_error_invalid_operation_string = Implementation error. Invalid operation string.
910 error.invalid_range_string = Invalid range string (must be zero or positive number)
911 error.implementation_error_delete_range_out_of_bounds = Implementation Error: deleteRange out of bounds: start must be non-negative and less than end.
912 error.implementation_error = Implementation error
913 error.implementation_error_unknown_operation = Implementation Error! Unknown operation {0}
914 error.implementation_error_unexpected_null_from_get_sequence_and_deletions = Implementation Error - unexpected null from getSequenceAndDeletions
915 error.implementation_error_set_seq_null = Implementation Error - _setSeq(null,...)
916 error.implementation_error_s = Implementation Error: _s= {0}
917 error.implementation_error_seqcigar_possible = SeqCigar: Possible implementation error: sequence is longer than dataset sequence
918 error.implmentation_bug_seq_null = Implementation Bug. Null seq
919 error.implementation_bug_cigar_operation_list_range_list = Implementation Bug. Cigar Operation list!= range list
920 error.not_yet_implemented_cigar_object_from_cigar_string = NOT YET Implemented: Constructing a Cigar object from a cigar string and a gapped sequence.
921 error.implementation_bug_cigar_operation = Implementation Bug. Cigar Operation {0} {1} not one of {2}, {3}, or {4}.
922 error.implementation_error_for_new_cigar = Implementation error for new Cigar(SequenceI)
923 error.implementation_error_cigar_seq_no_operations = Implementation error: {0}th sequence Cigar has no operations.
924 error.implementation_error_no_pdbentry_from_index = Implementation error - no corresponding pdbentry (for index {0}) to add sequences mappings to
925 error.jmol_version_not_compatible_with_jalview_version = Jmol version {0} is not compatible with this version of Jalview. Report this problem at issues.jalview.org
926 error.not_implemented_remove = Remove: Not implemented
927 error.not_implemented_clone = Clone: Not implemented
928 error.call_setprogressbar_before_registering_handler = call setProgressBar before registering the progress bar's handler.
929 label.cancelled_params = Cancelled {0}
930 error.implementation_error_cannot_show_view_alignment_frame = Implementation error: cannot show a view from another alignment in an AlignFrame.
931 error.implementation_error_dont_know_about_threshold_setting = Implementation error: don't know about threshold setting for current AnnotationColourGradient.
932 error.eps_generation_not_implemented = EPS Generation not yet implemented
933 error.png_generation_not_implemented = PNG Generation not yet implemented
934 error.try_join_vamsas_session_another = Trying to join a vamsas session when another is already connected
935 error.invalid_vamsas_session_id = Invalid vamsas session id
936 label.groovy_support_failed = Jalview Groovy Support Failed
937 label.couldnt_create_groovy_shell = Couldn't create the groovy Shell. Check the error log for the details of what went wrong.
938 error.unsupported_version_calcIdparam = Unsupported Version for calcIdparam {0}
939 error.implementation_error_cant_reorder_tree = Implementation Error: Can't reorder this tree. Not DefaultMutableTreeNode.
940 error.invalid_value_for_option = Invalid value {0} for option {1}
941 error.implementation_error_cannot_import_vamsas_doc = Implementation Error - cannot import existing vamsas document into an existing session, Yet!
942 label.vamsas_doc_couldnt_be_opened_as_new_session = VAMSAS Document could not be opened as a new session - please choose another
943 error.implementation_error_vamsas_operation_not_init = Impementation error! Vamsas Operations when client not initialised and connected
944 error.jalview_no_connected_vamsas_session = Jalview not connected to Vamsas session
945 error.implementation_error_cannot_recover_vamsas_object_mappings = IMPLEMENTATION ERROR: Cannot recover vamsas object mappings - no backup was made
946 error.setstatus_called_non_existent_job_pane = setStatus called for non-existent job pane {0}
947 error.implementation_error_cannot_find_marshaller_for_param_set =Implementation error: Can't find a marshaller for the parameter set
948 error.implementation_error_old_jalview_object_not_bound =IMPLEMENTATION ERROR: old jalview object is not bound ! ({0})
949 error.implementation_error_vamsas_doc_class_should_bind_to_type = Implementation Error: Vamsas Document Class {0} should bind to a {1} (found a {2})
950 error.invalid_vamsas_rangetype_cannot_resolve_lists = Invalid vamsas RangeType - cannot resolve both lists of Pos and Seg from choice!
951 error.implementation_error_maplist_is_null = Implementation error. MapList is null for initMapType.
952 error.implementation_error_cannot_have_null_alignment = Implementation error: Cannot have null alignment property key
953 error.implementation_error_null_fileparse = Implementation error. Null FileParse in copy constructor
954 error.implementation_error_cannot_map_alignment_sequences = IMPLEMENTATION ERROR: Cannot map an alignment of sequences from different datasets into a single alignment in the vamsas document.
955 error.implementation_error_structure_selection_manager_null = Implementation error. Structure selection manager's context is 'null'
956 exception.ssm_context_is_null = SSM context is null
957 error.idstring_seqstrings_only_one_per_sequence = idstrings and seqstrings contain one string each per sequence
958 error.cannot_have_mixed_length_replacement_vectors = Cannot have mixed length replacement vectors. Replacement vector for {0} is {1} strings long, and have already seen a {2} length vector.
959 error.cannot_have_zero_length_vector_replacement_strings = Cannot have zero length vector of replacement strings - either 1 value or n values.
960 error.implementation_error_multiple_single_sequence_prediction_jobs_not_supported = Implementation Error! Multiple single sequence prediction jobs are not yet supported
961 error.implementation_error_invalid_msa_index_for_job =Implementation Error! Invalid msaIndex for JPredJob on parent MSA input object!
962 error.implementation_error_startjob_called = Implementation error - StartJob(JpredJob) called on {0}
963 error.multiple_jnet_subjob_merge_not_implemented = Multiple JPred subjob merging not yet implemented
964 label.job_never_ran = Job never ran - input returned to user.
965 error.implementation_error_minlen_must_be_greater_zero = Implementation error: minlen must be zero or more
966 error.implementation_error_msawbjob_called = Implementation error - StartJob(MsaWSJob) called on a WSJobInstance {0}
967 error.implementation_error_cannot_attach_ws_menu_entry = IMPLEMENTATION ERROR: cannot attach WS Menu Entry without service handle reference!
968 error.parameter_migration_not_implemented_yet = Parameter migration not implemented yet
969 error.implementation_error_cannot_set_jaba_option = Implementation error: cannot set Jaba Option to a value outside its allowed value range!
970 error.implementation_error_valuetype_doesnt_support_jabaws_type = IMPLEMENTATION ERROR: jalview.ws.params.ValueConstrainI.ValueType does not support the JABAWS type : {0}
971 error.cannot_create_jabaws_param_set = Cannot create a JabaWSParamSet from non-JabaWS parameters
972 error.cannot_set_arguments_to_jabaws_param_set = Cannot set arguments to a JabaWSParamSet that are not JabaWS arguments
973 error.implementation_error_runner_config_not_available = Implementation Error: Runner Config not available for a JABAWS service of type {0} ({1})
974 error.implementation_error_cannot_handle_jaba_param = Implementation Error: Cannot handle Jaba parameter object {0}
975 error.implementation_error_attempt_to_delete_service_preset = Implementation error: Attempt to delete a service preset!
976 error.implementation_error_cannot_locate_oldname_presetname = Implementation error: Can't locate either oldname ({0}) or presetName ({1}in the datastore!"
977 error.implementation_error_jabaws_param_set_only_handled_by = Implementation error: JabaWsParamSets can only be handled by JabaParamStore
978 error.cannot_set_source_file_for = Cannot set source file for {0}
979 error.mismatch_service_instance_preset = Probable mismatch between service instance and preset!
980 error.cannot_set_params_for_ws_preset = Cannot set Parameters for a Jaba Web service's preset
981 error.implementation_error_can_only_instantiate_jaba_param_sets = Implementation error: Can only instantiate Jaba parameter sets
982 error.no_aacon_service_found = No AACon service found
983 error.implementation_error_couldnt_copy_value_constraint = Implementation error: could not copy ValueConstrain!
984 error.couldnt_encode_as_utf8 = Couldn't encode {0} as UTF-8.
985 error.tree_inputtype_not_yet_implemented = Tree InputType not yet implemented
986 error.implementation_error_need_to_have_httpresponse = Implementation Error: need to have an HttpResponse to process
987 error.dbrefsource_implementation_exception =DBRefSource Implementation Exception
988 error.implementation_error_dbinstance_must_implement_interface = Implmentation Error - getDbInstances must be given a class that implements jalview.ws.seqfetcher.DbSourceProxy (was given{0})
989 error.implementation_error_must_init_dbsources =Implementation error. Must initialise dbSources
990 label.view_controller_toggled_marked = {0} {1} columns {2} features of type {3}  across {4} sequence(s)
991 label.toggled = Toggled
992 label.marked = Marked
993 label.containing = containing
994 label.not_containing = not containing
995 label.no_feature_of_type_found = No features of type {0} found.
996 label.submission_params = Submission {0}
997 label.empty_alignment_job = Empty Alignment Job
998 label.add_new_sbrs_service = Add a new Simple Bioinformatics Rest Service
999 label.edit_sbrs_entry = Edit Simple Bioinformatics Rest Service entry
1000 label.pca_recalculating = Recalculating PCA
1001 label.pca_calculating = Calculating PCA
1002 label.select_foreground_colour = Choose foreground colour
1003 label.select_colour_for_text = Select Colour for Text
1004 label.adjunst_foreground_text_colour_threshold = Adjust Foreground Text Colour Threshold
1005 label.select_subtree_colour = Select Sub-Tree Colour
1006 label.create_new_sequence_features = Create New Sequence Feature(s)
1007 label.amend_delete_features = Amend/Delete Features for {0}
1008 exception.out_of_bounds_for_file = Out of bounds for file: i={0}, Final Buffer: i0={1} iend={2}
1009 exception.null_string_given_to_regex_search = Null String Given to Regex.search
1010 exception.null_string_like_given_to_regex_search = Null StringLike Given to Regex.search
1011 exception.null_string_given_to_regex_reverse_search = Null String Given to Regex.reverseSearch
1012 exception.null_string_like_given_to_regex_reverse_search = Null StringLike Given to Regex.reverseSearch
1013 exception.null_string_like_given_to_regex_search_from = Null String Given to Regex.searchFrom
1014 exception.null_string_like_given_to_regex_search_region = Null String Given to Regex.searchRegion
1015 exception.replace_null_regex_pointer = Replacer has null Regex pointer
1016 exception.bad_pattern_to_regex_perl_code = bad pattern to Regex.perlCode: {0}
1017 exception.no_stub_implementation_for_interface = There is no stub implementation for the interface: {0}
1018 exception.cannot_set_endpoint_address_unknown_port = Cannot set Endpoint Address for Unknown Port {0}
1019 exception.mismatched_unseen_closing_char = Mismatched (unseen) closing character {0}
1020 exception.mismatched_closing_char = Mismatched closing character {0}
1021 exception.mismatched_opening_char = Mismatched opening character {0} at {1}
1022 exception.invalid_datasource_couldnt_obtain_reader = Invalid datasource. Could not obtain Reader
1023 exception.unterminated_cigar_string = Unterminated cigar string
1024 exception.unexpected_operation_cigar_string_pos = Unexpected operation {0} in cigar string (position {1} in {2}
1025 exception.couldnt_parse_responde_from_annotated3d_server = Couldn't parse response from Annotate3d server
1026 exception.application_test_npe = Application test: throwing an NullPointerException It should arrive at the console
1027 exception.overwriting_vamsas_id_binding = Overwriting vamsas id binding
1028 exception.overwriting_jalview_id_binding = Overwriting jalview id binding
1029 exception.failed_to_resolve_gzip_stream = Failed to resolve GZIP stream
1030 exception.problem_opening_file_also_tried = Problem opening {0} (also tried {1}) : {2}
1031 exception.problem_opening_file = Problem opening {0} : {1}
1032 exception.failed_to_read_data_from_source = Failed to read data from source: {0}
1033 exception.no_init_source_stream = Unitialised Source Stream
1034 exception.invalid_source_stream = Invalid Source Stream: {0}
1035 error.implementation_error_reset_called_for_invalid_source = Implementation Error: Reset called for invalid source.
1036 exception.number_of_residues_in_query_sequence_differ_from_prediction = Number of residues in {0} supposed query sequence ({1}\n{2})\ndiffer from number of prediction sites in prediction ({3})
1037 label.mapped = mapped
1038 exception.jpredconcide_entry_has_unexpected_number_of_columns = JPredConcise: Entry ({0}) has an unexpected number of columns
1039 exception.couldnt_parse_concise_annotation_for_prediction = Couldn't parse concise annotation for prediction profile.\n{0}
1040 exception.newfile = NewickFile\: {0}\n
1041 label.no_tree_read_in = No Tree read in
1042 exception.rnaml_couldnt_access_datasource = Couldn't access datasource ({0})
1043 exception.ranml_couldnt_process_data = Couldn't process data as RNAML file ({0})
1044 exception.ranml_invalid_file = Invalid RNAML file ({0})
1045 exception.ranml_problem_parsing_data = Problem parsing data as RNAML ({0})
1046 exception.pfam_no_sequences_found = No sequences found (PFAM input)
1047 exception.stockholm_invalid_format = This file is not in valid STOCKHOLM format: First line does not contain '# STOCKHOLM'
1048 exception.couldnt_parse_sequence_line = Could not parse sequence line: {0}
1049 exception.unknown_annotation_detected = Unknown annotation detected: {0} {1}
1050 exception.couldnt_store_sequence_mappings = Couldn't store sequence mappings for {0}
1051 exception.matrix_too_many_iteration = Too many iterations in {0} (max is {1})
1052 exception.browser_not_found = Exception in finding browser: {0}
1053 exception.browser_unable_to_locate = Unable to locate browser: {0}
1054 exception.invocation_target_exception_creating_aedesc = InvocationTargetException while creating AEDesc: {0}
1055 exception.illegal_access_building_apple_evt= IllegalAccessException while building AppleEvent: {0}
1056 exception.unable_to_launch_url = Unable to launch URL: {0}
1057 exception.unable_to_create_internet_config = Unable to create an Internet Config instance: {0}
1058 exception.invocation_target_calling_url = InvocationTargetException while calling openURL: {0}
1059 exception.illegal_access_calling_url = IllegalAccessException while calling openURL: {0}
1060 exception.interrupted_launching_browser = InterruptedException while launching browser: {0}
1061 exception.ebiembl_retrieval_failed_on = EBI EMBL XML retrieval failed on {0}:{1}
1062 exception.no_pdb_records_for_chain = No PDB Records for {0} chain {1}
1063 exception.unexpected_handling_rnaml_translation_for_pdb = Unexpected exception when handling RNAML translation of PDB data
1064 exception.couldnt_recover_sequence_properties_for_alignment = Couldn't recover sequence properties for alignment
1065 exception.unknown_format_for_file = Unknown format {0} for file \: \n{1}
1066 label.remove_gaps = Remove Gaps
1067 exception.couldnt_recover_sequence_props_for_jnet_query = Couldn't recover sequence properties for JPred Query sequence!
1068 exception.server_timeout_try_later = Server timed out - try again later\n
1069 exception.web_service_returned_null_try_later= Server at {0} returned null object, it probably cannot be contacted. Try again later.
1070 exception.cannot_contact_service_endpoint_at = Cannot contact service endpoint at {0}
1071 error.implementation_error_cannot_find_service_url_in_given_set = Implementation error: Cannot find service url in the given url set!
1072 error.implementation_error_cannot_find_service_url_in_given_set_param_store = Implementation error: Cannot find service url in the given url set for this service parameter store ({0}}
1073 exception.jobsubmission_invalid_params_set = Invalid parameter set. Check Jalview implementation
1074 exception.notvaliddata_group_contains_less_than_min_seqs = Group contains less than {0} sequences.
1075 exception.outofmemory_loading_pdb_file = Out of memory loading PDB File
1076 exception.eps_coudnt_write_output_file = Could not write to the output file: {0}
1077 exception.eps_method_not_supported = Method not currently supported by EpsGraphics2D version {0}
1078 exception.eps_unable_to_get_inverse_matrix = Unable to get inverse of matrix: {0}
1079 warn.job_cannot_be_cancelled_close_window = This job cannot be cancelled.\nJust close the window.
1080 warn.service_not_supported = Service not supported!
1081 warn.input_is_too_big = Input is too big!
1082 warn.invalid_job_param_set = Invalid job parameter set!
1083 warn.oneseq_msainput_selection = The current selection only contains a single sequence. Do you want to submit all sequences for alignment instead ?   
1084 info.job_couldnt_be_run_server_doesnt_support_program = Job could not be run because the server doesn't support this program.\n{0}
1085 info.job_couldnt_be_run_exceeded_hard_limit = Job could not be run because it exceeded a hard limit on the server.\n{0}
1086 info.job_couldnt_be_run_incorrect_param_setting = Job could not be run because some of the parameter settings are not supported by the server.\n{0}\nPlease check to make sure you have used the correct parameter set for this service\!\n
1087 info.no_jobs_ran = No jobs ran
1088 info.failed_to_submit_prediction = Failed to submit the prediction\:\n{0} {1}
1089 info.invalid_jnet_job_result_data ={0}\n{1}\nInvalid JPred job result data\!\n{2}
1090 info.failed_to_submit_sequences_for_alignment = Failed to submit sequences for alignment.\nIt is most likely that there is a problem with the server.\nJust close the window\n
1091 info.alignment_object_method_notes = \nAlignment Object Method Notes\n
1092 info.server_exception = \n{0} Server exception\!\n{1}
1093 info.invalid_msa_input_mininfo = Need at least two sequences with at least 3 residues each, with no hidden regions between them.  
1094 info.invalid_msa_notenough = Not enough sequence data to align
1095 status.processing_commandline_args = Processing commandline arguments...
1096 status.das_features_being_retrived = DAS features being retrieved...
1097 status.searching_for_sequences_from = Searching for sequences from {0}
1098 status.finished_searching_for_sequences_from = Finished searching for sequences from {0}
1099 label.eps_file = EPS file
1100 label.png_image = PNG image
1101 status.saving_file = Saving {0}
1102 status.export_complete = {0} Export completed.
1103 status.fetching_pdb = Fetching PDB {0}
1104 status.refreshing_news = Refreshing news
1105 status.importing_vamsas_session_from = Importing VAMSAS session from {0}
1106 status.opening_params = Opening {0}
1107 status.waiting_sequence_database_fetchers_init = Waiting for Sequence Database Fetchers to initialise
1108 status.init_sequence_database_fetchers = Initialising Sequence Database Fetchers
1109 status.fetching_sequence_queries_from = Fetching {0} sequence queries from {1}
1110 status.finshed_querying = Finished querying
1111 status.parsing_results = Parsing results.
1112 status.processing = Processing...
1113 status.refreshing_web_service_menus = Refreshing Web Service Menus
1114 status.collecting_job_results = Collecting job results.
1115 status.fetching_db_refs = Fetching db refs
1116 status.loading_cached_pdb_entries = Loading Cached PDB Entries
1117 status.searching_for_pdb_structures = Searching for PDB Structures
1118 status.opening_file_for = opening file for
1119 status.colouring_chimera = Colouring Chimera
1120 label.font_doesnt_have_letters_defined = Font doesn't have letters defined\nso cannot be used\nwith alignment data
1121 label.font_too_small = Font size is too small
1122 label.error_loading_file_params = Error loading file {0}
1123 label.error_loading_jalview_file = Error loading Jalview file
1124 warn.out_of_memory_when_action = Out of memory when {0}\!\!\nSee help files for increasing Java Virtual Machine memory.
1125 warn.out_of_memory_loading_file = Out of memory loading file {0}\!\!\nSee help files for increasing Java Virtual Machine memory.
1126 label.out_of_memory = Out of memory
1127 label.invalid_id_column_width = Invalid ID Column width
1128 warn.user_defined_width_requirements = The user defined width for the\nannotation and sequence ID columns\nin exported figures must be\nat least 12 pixels wide.
1129 label.couldnt_create_sequence_fetcher = Couldn't create SequenceFetcher
1130 warn.couldnt_create_sequence_fetcher_client = Could not create the sequence fetcher client. Check error logs for details.
1131 warn.server_didnt_pass_validation = Service did not pass validation.\nCheck the Jalview Console for more details.
1132 warn.url_must_contain = Sequence URL must contain $SEQUENCE_ID$, $DB_ACCESSION$, or a regex
1133 warn.urls_not_contacted = URLs that could not be contacted
1134 warn.urls_no_jaba = URLs without any JABA Services
1135 info.validate_jabaws_server = Validate JabaWS Server ?\n(Look in console output for results)
1136 label.test_server = Test Server?
1137 label.new_sequence_fetcher = New Sequence Fetcher
1138 label.additional_sequence_fetcher = Additional Sequence Fetcher
1139 label.select_database_retrieval_source = Select Database Retrieval Source
1140 label.overwrite_existing_file = Overwrite existing file?
1141 label.file_already_exists = File exists
1142 label.edit_jabaws_url = Edit JABAWS URL
1143 label.add_jabaws_url = Add new JABAWS URL
1144 label.news_from_jalview = News from http://www.jalview.org
1145 label.cut_paste_alignmen_file = Cut & Paste Alignment File
1146 label.enter_redundancy_threshold = Enter the redundancy threshold
1147 label.select_dark_light_set_threshold = <html><i>Select a dark and light text colour, then set the threshold to<br>switch between colours, based on background colour</i></html>
1148 label.select_feature_colour = Select Feature Colour
1149 label.delete_all = Delete all sequences
1150 warn.delete_all = <html>Deleting all sequences will close the alignment window.<br>Confirm deletion or Cancel.
1151 label.add_annotations_for = Add annotations for
1152 action.choose_annotations = Choose Annotations...
1153 label.choose_annotations = Choose Annotations
1154 label.find = Find
1155 label.invalid_search = Search string invalid
1156 error.invalid_regex = Invalid regular expression
1157 label.ignore_gaps_consensus = Ignore Gaps In Consensus
1158 label.show_group_histogram = Show Group Histogram
1159 label.show_group_logo = Show Group Logo
1160 label.normalise_group_logo = Normalise Group Logo
1161 label.show_histogram = Show Histogram
1162 label.show_logo = Show Logo
1163 label.normalise_logo = Normalise Logo
1164 label.no_colour_selection_in_scheme = Please make a colour selection before applying colour scheme
1165 label.no_colour_selection_warn = Error saving colour scheme
1166 label.open_split_window? = Would you like to open as a split window, with cDNA and protein linked?
1167 label.open_split_window = Open split window
1168 action.no = No
1169 action.yes = Yes
1170 label.for = for
1171 label.select_by_annotation = Select/Hide Columns by Annotation
1172 action.select_by_annotation = Select/Hide Columns by Annotation...
1173 label.threshold_filter =  Threshold Filter
1174 label.alpha_helix = Alpha Helix
1175 label.beta_strand = Beta Strand
1176 label.turn = Turn
1177 label.select_all = Select All
1178 label.structures_filter = Structures Filter
1179 label.search_filter = Search Filter
1180 label.include_description= Include Description
1181 action.back = Back
1182 label.hide_insertions = Hide Insertions
1183 label.mark_as_representative = Mark as representative
1184 label.open_jabaws_web_page = Open JABAWS web page
1185 label.pdb_sequence_fetcher = PDB Sequence Fetcher
1186 label.result = result
1187 label.results = results
1188 label.structure_chooser = Structure Chooser
1189 label.invert = Invert 
1190 label.select_pdb_file = Select PDB File
1191 info.select_filter_option = Select Filter Option/Manual Entry
1192 info.associate_wit_sequence = Associate with Sequence
1193 label.search_result = Search Result
1194 label.found_structures_summary = Found Structures Summary
1195 label.configure_displayed_columns = Customise Displayed Options
1196 label.start_jalview = Start Jalview
1197 label.biojs_html_export = BioJS
1198 label.scale_as_cdna = Scale protein residues to codons
1199 label.font_as_cdna = Use same font for cDNA and peptide
1200 label.scale_protein_to_cdna = Scale Protein to cDNA
1201 label.scale_protein_to_cdna_tip = Make protein residues same width as codons in split frame views
1202 info.select_annotation_row = Select Annotation Row
1203 info.enter_search_text_here = Enter Search Text Here
1204 info.enter_search_text_to_enable = Enter Search Text to Enable
1205 info.search_in_annotation_label = Search in {0} Label
1206 info.search_in_annotation_description = Search in {0} Description
1207 info.change_threshold_mode_to_enable = Change Threshold Mode to Enable
1208 label.couldnt_read_data = Couldn't read data
1209 label.embbed_biojson = Embed BioJSON to HTML export
1210 action.export_groups = Export Groups
1211 action.export_annotations = Export Annotations
1212 action.export_hidden_columns = Export Hidden Columns
1213 action.export_hidden_sequences = Export Hidden Sequences
1214 action.export_features = Export Features
1215 label.export_settings = Export Settings
1216 label.pdb_web-service_error = PDB Web-service Error
1217 label.structure_chooser_manual_association = Structure Chooser - Manual association
1218 label.structure_chooser_filter_time = Structure Chooser - Filter time ({0})
1219 label.structure_chooser_no_of_structures = Structure Chooser - {0} Found ({1})
1220 info.no_pdb_entry_found_for = No PDB entry found for {0}
1221 exception.unable_to_detect_internet_connection = Jalview is unable to detect an internet connection
1222 exception.fts_rest_service_no_longer_available = {0} rest services no longer available!
1223 exception.resource_not_be_found = The requested resource could not be found
1224 exception.fts_server_error = There seems to be an error from the {0} server
1225 exception.fts_server_unreachable = Jalview is unable to reach the {0} server. \nPlease ensure that you are connected to the internet and try again.
1226 label.nw_mapping = Needleman & Wunsch Alignment
1227 label.sifts_mapping = SIFTs Mapping
1228 label.mapping_method = Sequence \u27f7 Structure mapping method
1229 status.waiting_for_user_to_select_output_file = Waiting for user to select {0} file
1230 status.cancelled_image_export_operation = Cancelled {0} export operation
1231 info.error_creating_file = Error creating {0} file
1232 exception.outofmemory_loading_mmcif_file = Out of memory loading mmCIF File
1233 label.run_groovy = Run Groovy console script
1234 label.run_groovy_tip = Run the script in the Groovy console over this alignment
1235 label.couldnt_run_groovy_script = Failed to run Groovy script
1236 label.uniprot_sequence_fetcher = UniProt Sequence Fetcher
1237 action.next_page= >> 
1238 action.prev_page= << 
1239 label.next_page_tooltip=Next Page
1240 label.prev_page_tooltip=Previous Page
1241 exception.bad_request=Bad request. There is a problem with your input.
1242 exception.service_not_available=Service not available. The server is being updated, try again later.
1243 status.launching_3d_structure_viewer = Launching 3D Structure viewer...
1244 status.fetching_3d_structures_for_selected_entries = Fetching 3D Structures for selected entries...
1245 status.fetching_dbrefs_for_sequences_without_valid_refs = Fetching db refs for {0} sequence(s) without valid db ref required for SIFTS mapping
1246 status.fetching_3d_structures_for = Fetching 3D Structure for {0}
1247 status.obtaining_mapping_with_sifts = Obtaining mapping with SIFTS
1248 status.obtaining_mapping_with_nw_alignment = Obtaining mapping with NW alignment
1249 status.exporting_alignment_as_x_file = Exporting alignment as {0} file
1250 label.column = Column
1251 label.cant_map_cds = Unable to map CDS to protein\nCDS missing or incomplete
1252 label.operation_failed = Operation failed
1253 label.SEQUENCE_ID_no_longer_used = $SEQUENCE_ID$ is no longer used for DB accessions
1254 label.SEQUENCE_ID_for_DB_ACCESSION1 = Please review your URL links in the 'Connections' tab of the Preferences window:
1255 label.SEQUENCE_ID_for_DB_ACCESSION2 = URL links using '$SEQUENCE_ID$' for DB accessions now use '$DB_ACCESSION$'.
1256 label.do_not_display_again = Do not display this message again
1257 exception.url_cannot_have_duplicate_id = {0} cannot be used as a label for more than one line
1258 label.filter = Filter text:
1259 action.customfilter = Custom only
1260 action.showall = Show All
1261 label.insert = Insert:
1262 action.seq_id = $SEQUENCE_ID$
1263 action.db_acc = $DB_ACCESSION$
1264 label.primary = Double Click
1265 label.inmenu = In Menu
1266 label.id = ID
1267 label.database = Database
1268 label.urltooltip = Only one url, which must use a sequence id, can be selected for the 'On Click' option
1269 label.edit_sequence_url_link = Edit sequence URL link
1270 warn.name_cannot_be_duplicate = User-defined URL names must be unique and cannot be MIRIAM ids
1271 label.output_seq_details = Output Sequence Details to list all database references
1272 label.urllinks = Links
1273 action.clear_cached_items = Clear Cached Items
1274 label.togglehidden = Show hidden regions
1275 label.quality_descr = Alignment Quality based on Blosum62 scores
1276 label.conservation_descr = Conservation of total alignment less than {0}% gaps
1277 label.consensus_descr = PID
1278 label.complement_consensus_descr = PID for cDNA
1279 label.strucconsensus_descr = PID for base pairs
1280 label.occupancy_descr = Number of aligned positions 
1281 label.show_experimental = Enable experimental features
1282 label.show_experimental_tip = Enable any new and currently 'experimental' features (see Latest Release Notes for details)
1283 label.warning_hidden = Warning: {0} {1} is currently hidden
1284 label.overview_settings = Overview settings
1285 label.ov_legacy_gap = Use legacy gap colouring (gaps are white)
1286 label.gap_colour = Gap colour:
1287 label.ov_show_hide_default = Show hidden regions when opening overview
1288 label.hidden_colour = Hidden colour:
1289 label.select_gap_colour = Select gap colour
1290 label.select_hidden_colour = Select hidden colour
1291 label.overview = Overview
1292 label.reset_to_defaults = Reset to defaults
1293 label.oview_calc = Recalculating overview...
1294 label.feature_details = Feature details
1295 label.matchCondition_contains = Contains
1296 label.matchCondition_notcontains = Does not contain
1297 label.matchCondition_matches = Matches
1298 label.matchCondition_notmatches = Does not match
1299 label.matchCondition_present = Is present
1300 label.matchCondition_notpresent = Is not present
1301 label.matchCondition_eq = =
1302 label.matchCondition_ne = not =
1303 label.matchCondition_lt = <
1304 label.matchCondition_le = <=
1305 label.matchCondition_gt = >
1306 label.matchCondition_ge = >=
1307 label.numeric_required = The value should be numeric
1308 label.filter = Filter
1309 label.filters = Filters
1310 label.join_conditions = Join conditions with
1311 label.score = Score
1312 label.colour_by_label = Colour by label
1313 label.variable_colour = Variable colour...
1314 label.select_colour = Select colour
1315 option.enable_disable_autosearch = When ticked, search is performed automatically
1316 option.autosearch = Autosearch
1317 label.retrieve_ids = Retrieve IDs
1318 label.display_settings_for = Display settings for {0} features
1319 label.simple = Simple
1320 label.simple_colour = Simple Colour
1321 label.colour_by_text = Colour by text
1322 label.graduated_colour = Graduated Colour
1323 label.by_text_of = By text of
1324 label.by_range_of = By range of
1325 label.filters_tooltip = Click to set or amend filters
1326 label.or = Or
1327 label.and = And
1328 label.sequence_feature_colours = Sequence Feature Colours
1329 label.best_quality = Best Quality
1330 label.best_resolution = Best Resolution
1331 label.most_protein_chain = Most Protein Chain
1332 label.most_bound_molecules = Most Bound Molecules
1333 label.most_polymer_residues = Most Polymer Residues
1334 label.cached_structures = Cached Structures
1335 label.free_text_search = Free Text Search