src/jalview/jbgui/GAlignmentPanel.java

   1 /*
   2  * Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$)
   3  * Copyright (C) $$Year-Rel$$ The Jalview Authors
   4  *
   5  * This file is part of Jalview.
   6  *
   7  * Jalview is free software: you can redistribute it and/or
   8  * modify it under the terms of the GNU General Public License
   9  * as published by the Free Software Foundation, either version 3
  10  * of the License, or (at your option) any later version.
  11  *
  12  * Jalview is distributed in the hope that it will be useful, but
  13  * WITHOUT ANY WARRANTY; without even the implied warranty
  14  * of MERCHANTABILITY or FITNESS FOR A PARTICULAR
  15  * PURPOSE.  See the GNU General Public License for more details.
  16  *
  17  * You should have received a copy of the GNU General Public License
  18  * along with Jalview.  If not, see <http://www.gnu.org/licenses/>.
  19  * The Jalview Authors are detailed in the 'AUTHORS' file.
  20  */
  21 package jalview.jbgui;
  22
  23 import java.awt.BorderLayout;
  24 import java.awt.Color;
  25 import java.awt.Dimension;
  26
  27 import javax.swing.BorderFactory;
  28 import javax.swing.ButtonGroup;
  29 import javax.swing.JPanel;
  30 import javax.swing.JScrollBar;
  31 import javax.swing.JScrollPane;
  32 import javax.swing.border.Border;
  33
  34 @SuppressWarnings("serial")
  35 public class GAlignmentPanel extends JPanel
  36 {
  37           protected JScrollBar vscroll = new JScrollBar();
  38
  39           protected JScrollBar hscroll = new JScrollBar();
  40
  41           BorderLayout borderLayout1 = new BorderLayout();
  42
  43           BorderLayout borderLayout3 = new BorderLayout();
  44
  45           BorderLayout borderLayout5 = new BorderLayout();
  46
  47           BorderLayout borderLayout6 = new BorderLayout();
  48
  49           ButtonGroup buttonGroup1 = new ButtonGroup();
  50
  51           BorderLayout borderLayout7 = new BorderLayout();
  52
  53           BorderLayout borderLayout10 = new BorderLayout();
  54
  55           BorderLayout borderLayout11 = new BorderLayout();
  56
  57   public JScrollPane annotationScroller = new JScrollPane();
  58
  59           Border border1;
  60
  61           BorderLayout borderLayout4 = new BorderLayout();
  62
  63
  64           static JPanel newJPanel() {  // BH 2019
  65                   JPanel p = new JPanel();
  66                   // leaving this in, as it prevents
  67                   // the checkerboard business, despite how
  68                   // funky that looks. Remove if you want to.
  69                   p.setBackground(Color.white);
  70                         return p;
  71           }
  72
  73   protected JPanel sequenceHolderPanel = newJPanel();
  74   protected JPanel seqPanelHolder = newJPanel();
  75   protected JPanel scalePanelHolder = newJPanel();
  76   protected JPanel idPanelHolder = newJPanel();
  77   protected JPanel idSpaceFillerPanel1 = newJPanel();
  78   public JPanel annotationSpaceFillerHolder = newJPanel();
  79   protected JPanel hscrollFillerPanel = newJPanel();
  80   JPanel hscrollHolder = newJPanel();
  81
  82
  83
  84   public GAlignmentPanel()
  85   {
  86     try
  87     {
  88       jbInit();
  89     } catch (Exception e)
  90     {
  91       e.printStackTrace();
  92     }
  93   }
  94
  95   private void jbInit() throws Exception
  96   {
  97         //  annotationScroller.setBackground(Color.white);  // BH 2019
  98
  99     border1 = BorderFactory.createLineBorder(Color.gray, 1);
 100     idPanelHolder.setBorder(null);
 101     idPanelHolder.setPreferredSize(new Dimension(70, 10));
 102     this.setLayout(borderLayout7);
 103     sequenceHolderPanel
 104             .setMaximumSize(new Dimension(2147483647, 2147483647));
 105     sequenceHolderPanel.setMinimumSize(new Dimension(150, 150));
 106     sequenceHolderPanel.setPreferredSize(new Dimension(150, 150));
 107     sequenceHolderPanel.setLayout(borderLayout3);
 108     seqPanelHolder.setLayout(borderLayout1);
 109     scalePanelHolder.setBackground(Color.white);
 110     scalePanelHolder.setMinimumSize(new Dimension(10, 80));
 111     scalePanelHolder.setPreferredSize(new Dimension(10, 30));
 112     scalePanelHolder.setLayout(borderLayout6);
 113     idPanelHolder.setLayout(borderLayout5);
 114     idSpaceFillerPanel1.setBackground(Color.white);
 115     idSpaceFillerPanel1.setPreferredSize(new Dimension(10, 30));
 116     idSpaceFillerPanel1.setLayout(borderLayout11);
 117     annotationSpaceFillerHolder.setBackground(Color.white);
 118     annotationSpaceFillerHolder.setPreferredSize(new Dimension(10, 80));
 119     annotationSpaceFillerHolder.setLayout(borderLayout4);
 120     hscroll.setOrientation(JScrollBar.HORIZONTAL);
 121     hscrollHolder.setLayout(borderLayout10);
 122     hscrollFillerPanel.setBackground(Color.white);
 123     hscrollFillerPanel.setPreferredSize(new Dimension(70, 10));
 124     hscrollHolder.setBackground(Color.white);
 125     annotationScroller.setBorder(null);
 126     annotationScroller.setPreferredSize(new Dimension(10, 80));
 127     this.setPreferredSize(new Dimension(220, 166));
 128
 129     sequenceHolderPanel.add(scalePanelHolder, BorderLayout.NORTH);
 130     sequenceHolderPanel.add(seqPanelHolder, BorderLayout.CENTER);
 131     seqPanelHolder.add(vscroll, BorderLayout.EAST);
 132     sequenceHolderPanel.add(annotationScroller, BorderLayout.SOUTH);
 133
 134     // jPanel3.add(secondaryPanelHolder, BorderLayout.SOUTH);
 135     this.add(idPanelHolder, BorderLayout.WEST);
 136     idPanelHolder.add(idSpaceFillerPanel1, BorderLayout.NORTH);
 137     idPanelHolder.add(annotationSpaceFillerHolder, BorderLayout.SOUTH);
 138     this.add(hscrollHolder, BorderLayout.SOUTH);
 139     hscrollHolder.add(hscroll, BorderLayout.CENTER);
 140     hscrollHolder.add(hscrollFillerPanel, BorderLayout.WEST);
 141     this.add(sequenceHolderPanel, BorderLayout.CENTER);
 142   }
 143 }