src/jalview/jbgui/GDesktop.java

   1 /*
   2  * Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$)
   3  * Copyright (C) $$Year-Rel$$ The Jalview Authors
   4  *
   5  * This file is part of Jalview.
   6  *
   7  * Jalview is free software: you can redistribute it and/or
   8  * modify it under the terms of the GNU General Public License
   9  * as published by the Free Software Foundation, either version 3
  10  * of the License, or (at your option) any later version.
  11  *
  12  * Jalview is distributed in the hope that it will be useful, but
  13  * WITHOUT ANY WARRANTY; without even the implied warranty
  14  * of MERCHANTABILITY or FITNESS FOR A PARTICULAR
  15  * PURPOSE.  See the GNU General Public License for more details.
  16  *
  17  * You should have received a copy of the GNU General Public License
  18  * along with Jalview.  If not, see <http://www.gnu.org/licenses/>.
  19  * The Jalview Authors are detailed in the 'AUTHORS' file.
  20  */
  21 package jalview.jbgui;
  22
  23 import jalview.api.AlignmentViewPanel;
  24 import jalview.bin.Jalview;
  25 import jalview.io.FileFormatException;
  26 import jalview.util.MessageManager;
  27 import jalview.util.Platform;
  28
  29 import java.awt.FlowLayout;
  30 import java.awt.Toolkit;
  31 import java.awt.event.ActionEvent;
  32 import java.awt.event.ActionListener;
  33
  34 import javax.swing.JCheckBoxMenuItem;
  35 import javax.swing.JFrame;
  36 import javax.swing.JMenu;
  37 import javax.swing.JMenuBar;
  38 import javax.swing.JMenuItem;
  39
  40 /**
  41  * DOCUMENT ME!
  42  *
  43  * @author $author$
  44  * @version $Revision$
  45  */
  46 public class GDesktop extends JFrame
  47 {
  48
  49   public static javax.swing.JTabbedPane createTabbedPane()
  50   {
  51     // now just always return JTabbedPane
  52    return new javax.swing.JTabbedPane();
  53 //    // BH 2018 coercing jalview.jbgui.swing.JTabbedPane() for now
  54 //    if (/** @j2sNative false && */
  55 //    true)
  56 //    {
  57 //      // Java
  58 //      return new javax.swing.JTabbedPane();
  59 //    }
  60 //    // JavaScript
  61 //    return (javax.swing.JTabbedPane) (Object) new jalview.jbgui.swing.JTabbedPane();
  62   }
  63
  64
  65   protected static JMenu windowMenu = new JMenu();
  66
  67   JMenuBar desktopMenubar = new JMenuBar();
  68
  69   JMenu FileMenu = new JMenu();
  70
  71   JMenu HelpMenu = new JMenu();
  72
  73   protected JMenu VamsasMenu = new JMenu();
  74
  75   protected JMenu VamsasStMenu = new JMenu();
  76
  77   JMenuItem inputLocalFileMenuItem = new JMenuItem();
  78
  79   JMenuItem inputURLMenuItem = new JMenuItem();
  80
  81   JMenuItem inputTextboxMenuItem = new JMenuItem();
  82
  83   JMenuItem quit = new JMenuItem();
  84
  85   JMenuItem aboutMenuItem = new JMenuItem();
  86
  87   JMenuItem documentationMenuItem = new JMenuItem();
  88
  89   FlowLayout flowLayout1 = new FlowLayout();
  90
  91   protected JMenu toolsMenu = new JMenu();
  92
  93   JMenuItem preferences = new JMenuItem();
  94
  95   JMenuItem saveState = new JMenuItem();
  96
  97   JMenuItem loadState = new JMenuItem();
  98
  99   JMenu inputMenu = new JMenu();
 100
 101   protected JMenuItem vamsasStart = new JMenuItem();
 102
 103   protected JMenuItem vamsasImport = new JMenuItem();
 104
 105   protected JMenuItem vamsasSave = new JMenuItem();
 106
 107   JMenuItem inputSequence = new JMenuItem();
 108
 109   protected JMenuItem vamsasStop = new JMenuItem();
 110
 111   JMenuItem closeAll = new JMenuItem();
 112
 113   JMenuItem raiseRelated = new JMenuItem();
 114
 115   JMenuItem minimizeAssociated = new JMenuItem();
 116
 117   protected JCheckBoxMenuItem showMemusage = new JCheckBoxMenuItem();
 118
 119   JMenuItem garbageCollect = new JMenuItem();
 120
 121   protected JMenuItem groovyShell;
 122
 123   protected JCheckBoxMenuItem experimentalFeatures;
 124
 125   protected JCheckBoxMenuItem showConsole = new JCheckBoxMenuItem();
 126
 127   protected JCheckBoxMenuItem showNews = new JCheckBoxMenuItem();
 128
 129   protected JMenuItem snapShotWindow = new JMenuItem();
 130
 131   /**
 132    * Creates a new GDesktop object.
 133    */
 134   public GDesktop()
 135   {
 136     super();
 137     try
 138     {
 139       jbInit();
 140       this.setJMenuBar(desktopMenubar);
 141     } catch (Exception e)
 142     {
 143       e.printStackTrace();
 144     }
 145
 146     if (!Platform.isAMac())
 147     {
 148       FileMenu.setMnemonic('F');
 149       inputLocalFileMenuItem.setMnemonic('L');
 150       VamsasMenu.setMnemonic('V');
 151       inputURLMenuItem.setMnemonic('U');
 152       inputTextboxMenuItem.setMnemonic('C');
 153       quit.setMnemonic('Q');
 154       saveState.setMnemonic('S');
 155       loadState.setMnemonic('L');
 156       inputMenu.setMnemonic('I');
 157     }
 158   }
 159
 160   /**
 161    * DOCUMENT ME!
 162    *
 163    * @throws Exception
 164    *           DOCUMENT ME!
 165    */
 166   private void jbInit() throws Exception
 167   {
 168
 169     FileMenu.setText(MessageManager.getString("action.file"));
 170     HelpMenu.setText(MessageManager.getString("action.help"));
 171     VamsasMenu.setText("Vamsas");
 172     VamsasMenu.setToolTipText(MessageManager
 173             .getString("label.share_data_vamsas_applications"));
 174     VamsasStMenu.setText(MessageManager.getString("label.connect_to"));
 175     VamsasStMenu.setToolTipText(
 176             MessageManager.getString("label.join_existing_vamsas_session"));
 177     inputLocalFileMenuItem
 178             .setText(MessageManager.getString("label.load_tree_from_file"));
 179     inputLocalFileMenuItem.setAccelerator(
 180             javax.swing.KeyStroke.getKeyStroke(java.awt.event.KeyEvent.VK_O,
 181                     Toolkit.getDefaultToolkit().getMenuShortcutKeyMask(),
 182                     false));
 183     inputLocalFileMenuItem
 184             .addActionListener(new java.awt.event.ActionListener()
 185             {
 186               @Override
 187               public void actionPerformed(ActionEvent e)
 188               {
 189                 inputLocalFileMenuItem_actionPerformed(null);
 190               }
 191             });
 192     inputURLMenuItem.setText(MessageManager.getString("label.from_url"));
 193     inputURLMenuItem.addActionListener(new java.awt.event.ActionListener()
 194     {
 195       @Override
 196       public void actionPerformed(ActionEvent e)
 197       {
 198         try
 199         {
 200           inputURLMenuItem_actionPerformed(null);
 201         } catch (FileFormatException e1)
 202         {
 203           System.err.println("Error loading from URL: " + e1.getMessage());
 204         }
 205       }
 206     });
 207     inputTextboxMenuItem
 208             .setText(MessageManager.getString("label.from_textbox"));
 209     inputTextboxMenuItem
 210             .addActionListener(new java.awt.event.ActionListener()
 211             {
 212               @Override
 213               public void actionPerformed(ActionEvent e)
 214               {
 215                 inputTextboxMenuItem_actionPerformed(null);
 216               }
 217             });
 218     quit.setText(MessageManager.getString("action.quit"));
 219     quit.addActionListener(new java.awt.event.ActionListener()
 220     {
 221       @Override
 222       public void actionPerformed(ActionEvent e)
 223       {
 224         quit();
 225       }
 226     });
 227     aboutMenuItem.setText(MessageManager.getString("label.about"));
 228     aboutMenuItem.addActionListener(new java.awt.event.ActionListener()
 229     {
 230       @Override
 231       public void actionPerformed(ActionEvent e)
 232       {
 233         aboutMenuItem_actionPerformed(e);
 234       }
 235     });
 236     documentationMenuItem
 237             .setText(MessageManager.getString("label.documentation"));
 238     documentationMenuItem.setAccelerator(javax.swing.KeyStroke
 239             .getKeyStroke(java.awt.event.KeyEvent.VK_F1, 0, false));
 240     documentationMenuItem
 241             .addActionListener(new java.awt.event.ActionListener()
 242             {
 243               @Override
 244               public void actionPerformed(ActionEvent e)
 245               {
 246                 documentationMenuItem_actionPerformed();
 247               }
 248             });
 249     this.getContentPane().setLayout(flowLayout1);
 250     windowMenu.setText(MessageManager.getString("label.window"));
 251     preferences.setText(MessageManager.getString("label.preferences"));
 252     preferences.addActionListener(new ActionListener()
 253     {
 254       @Override
 255       public void actionPerformed(ActionEvent e)
 256       {
 257         preferences_actionPerformed(e);
 258       }
 259     });
 260     toolsMenu.setText(MessageManager.getString("label.tools"));
 261     saveState.setText(MessageManager.getString("action.save_project"));
 262     saveState.addActionListener(new ActionListener()
 263     {
 264       @Override
 265       public void actionPerformed(ActionEvent e)
 266       {
 267         saveState_actionPerformed();
 268       }
 269     });
 270     loadState.setText(MessageManager.getString("action.load_project"));
 271     loadState.addActionListener(new ActionListener()
 272     {
 273       @Override
 274       public void actionPerformed(ActionEvent e)
 275       {
 276         loadState_actionPerformed();
 277       }
 278     });
 279     inputMenu.setText(MessageManager.getString("label.input_alignment"));
 280     vamsasStart
 281             .setText(MessageManager.getString("label.new_vamsas_session"));
 282     vamsasStart.setVisible(false);
 283     vamsasStart.addActionListener(new ActionListener()
 284     {
 285       @Override
 286       public void actionPerformed(ActionEvent e)
 287       {
 288         vamsasStart_actionPerformed(e);
 289       }
 290     });
 291     vamsasImport.setText(
 292             MessageManager.getString("action.load_vamsas_session"));
 293     vamsasImport.setVisible(false);
 294     vamsasImport.addActionListener(new ActionListener()
 295     {
 296       @Override
 297       public void actionPerformed(ActionEvent e)
 298       {
 299         vamsasImport_actionPerformed(e);
 300       }
 301     });
 302     vamsasSave.setText(
 303             MessageManager.getString("action.save_vamsas_session"));
 304     vamsasSave.setVisible(false);
 305     vamsasSave.addActionListener(new ActionListener()
 306     {
 307       @Override
 308       public void actionPerformed(ActionEvent e)
 309       {
 310         vamsasSave_actionPerformed(e);
 311       }
 312     });
 313     inputSequence
 314             .setText(MessageManager.getString("action.fetch_sequences"));
 315     inputSequence.addActionListener(new ActionListener()
 316     {
 317       @Override
 318       public void actionPerformed(ActionEvent e)
 319       {
 320         inputSequence_actionPerformed(e);
 321       }
 322     });
 323     vamsasStop
 324             .setText(MessageManager.getString("label.stop_vamsas_session"));
 325     vamsasStop.setVisible(false);
 326     vamsasStop.addActionListener(new ActionListener()
 327     {
 328       @Override
 329       public void actionPerformed(ActionEvent e)
 330       {
 331         vamsasStop_actionPerformed(e);
 332       }
 333     });
 334     closeAll.setText(MessageManager.getString("action.close_all"));
 335     closeAll.addActionListener(new ActionListener()
 336     {
 337       @Override
 338       public void actionPerformed(ActionEvent e)
 339       {
 340         closeAll_actionPerformed(e);
 341       }
 342     });
 343     raiseRelated.setText(
 344             MessageManager.getString("action.raise_associated_windows"));
 345     raiseRelated.addActionListener(new ActionListener()
 346     {
 347       @Override
 348       public void actionPerformed(ActionEvent e)
 349       {
 350         raiseRelated_actionPerformed(e);
 351       }
 352     });
 353     minimizeAssociated.setText(
 354             MessageManager.getString("action.minimize_associated_windows"));
 355     minimizeAssociated.addActionListener(new ActionListener()
 356     {
 357       @Override
 358       public void actionPerformed(ActionEvent e)
 359       {
 360         minimizeAssociated_actionPerformed(e);
 361       }
 362     });
 363     garbageCollect
 364             .setText(MessageManager.getString("label.collect_garbage"));
 365     garbageCollect.addActionListener(new ActionListener()
 366     {
 367       @Override
 368       public void actionPerformed(ActionEvent e)
 369       {
 370         garbageCollect_actionPerformed(e);
 371       }
 372     });
 373     showMemusage
 374             .setText(MessageManager.getString("label.show_memory_usage"));
 375     showMemusage.addActionListener(new ActionListener()
 376     {
 377       @Override
 378       public void actionPerformed(ActionEvent e)
 379       {
 380         showMemusage_actionPerformed(e);
 381       }
 382     });
 383     showConsole
 384             .setText(MessageManager.getString("label.show_java_console"));
 385     showConsole.addActionListener(new ActionListener()
 386     {
 387       @Override
 388       public void actionPerformed(ActionEvent e)
 389       {
 390         showConsole_actionPerformed(e);
 391       }
 392     });
 393     showNews.setText(MessageManager.getString("label.show_jalview_news"));
 394     showNews.addActionListener(new ActionListener()
 395     {
 396       @Override
 397       public void actionPerformed(ActionEvent e)
 398       {
 399         showNews_actionPerformed(e);
 400       }
 401     });
 402     groovyShell = new JMenuItem();
 403     groovyShell.setText(MessageManager.getString("label.groovy_console"));
 404     groovyShell.addActionListener(new ActionListener()
 405     {
 406       @Override
 407       public void actionPerformed(ActionEvent e)
 408       {
 409         groovyShell_actionPerformed();
 410       }
 411     });
 412     experimentalFeatures = new JCheckBoxMenuItem();
 413     experimentalFeatures
 414             .setText(MessageManager.getString("label.show_experimental"));
 415     experimentalFeatures.setToolTipText(
 416             MessageManager.getString("label.show_experimental_tip"));
 417     experimentalFeatures.addActionListener(new ActionListener()
 418     {
 419       @Override
 420       public void actionPerformed(ActionEvent e)
 421       {
 422         showExperimental_actionPerformed(experimentalFeatures.isSelected());
 423       }
 424     });
 425
 426     snapShotWindow.setText(MessageManager.getString("label.take_snapshot"));
 427     snapShotWindow.addActionListener(new ActionListener()
 428     {
 429       @Override
 430       public void actionPerformed(ActionEvent e)
 431       {
 432         snapShotWindow_actionPerformed(e);
 433       }
 434     });
 435
 436     desktopMenubar.add(FileMenu);
 437     desktopMenubar.add(toolsMenu);
 438     VamsasMenu.setVisible(false);
 439     desktopMenubar.add(VamsasMenu);
 440     desktopMenubar.add(HelpMenu);
 441     desktopMenubar.add(windowMenu);
 442     FileMenu.add(inputMenu);
 443     FileMenu.add(inputSequence);
 444         FileMenu.addSeparator();
 445         FileMenu.add(saveState);
 446         FileMenu.add(loadState);
 447         FileMenu.addSeparator();
 448     FileMenu.add(quit);
 449     HelpMenu.add(aboutMenuItem);
 450     HelpMenu.add(documentationMenuItem);
 451     VamsasMenu.add(VamsasStMenu);
 452     VamsasStMenu.setVisible(false);
 453     VamsasMenu.add(vamsasStart);
 454     VamsasMenu.add(vamsasImport);
 455     VamsasMenu.add(vamsasSave);
 456     VamsasMenu.add(vamsasStop);
 457     toolsMenu.add(preferences);
 458     if (!Jalview.isJS())
 459     {
 460       toolsMenu.add(showMemusage);
 461       toolsMenu.add(showConsole);
 462     }
 463     if (!Jalview.isJS())
 464     {
 465       toolsMenu.add(showNews);
 466       toolsMenu.add(garbageCollect);
 467       toolsMenu.add(groovyShell);
 468     }
 469     toolsMenu.add(experimentalFeatures);
 470     // toolsMenu.add(snapShotWindow);
 471     inputMenu.add(inputLocalFileMenuItem);
 472     inputMenu.add(inputURLMenuItem);
 473     inputMenu.add(inputTextboxMenuItem);
 474     windowMenu.add(closeAll);
 475     windowMenu.add(raiseRelated);
 476     windowMenu.add(minimizeAssociated);
 477     windowMenu.addSeparator();
 478     // inputMenu.add(vamsasLoad);
 479   }
 480
 481   protected void showExperimental_actionPerformed(boolean selected)
 482   {
 483   }
 484
 485   protected void groovyShell_actionPerformed()
 486   {
 487   }
 488
 489   protected void snapShotWindow_actionPerformed(ActionEvent e)
 490   {
 491     // TODO Auto-generated method stub
 492
 493   }
 494
 495   protected void showConsole_actionPerformed(ActionEvent e)
 496   {
 497     // TODO Auto-generated method stub
 498
 499   }
 500
 501   protected void showNews_actionPerformed(ActionEvent e)
 502   {
 503     // TODO Auto-generated method stub
 504
 505   }
 506
 507   protected void showMemusage_actionPerformed(ActionEvent e)
 508   {
 509     // TODO Auto-generated method stub
 510
 511   }
 512
 513   protected void garbageCollect_actionPerformed(ActionEvent e)
 514   {
 515     // TODO Auto-generated method stub
 516
 517   }
 518
 519   protected void vamsasStMenu_actionPerformed()
 520   {
 521   }
 522
 523   public void vamsasSave_actionPerformed(ActionEvent e)
 524   {
 525   }
 526
 527   /**
 528    * DOCUMENT ME!
 529    *
 530    * @param e
 531    *          DOCUMENT ME!
 532    */
 533   protected void inputLocalFileMenuItem_actionPerformed(
 534           jalview.gui.AlignViewport av)
 535   {
 536   }
 537
 538   /**
 539    * DOCUMENT ME!
 540    *
 541    * @param e
 542    *          DOCUMENT ME!
 543    * @throws FileFormatException
 544    */
 545   protected void inputURLMenuItem_actionPerformed(
 546           jalview.gui.AlignViewport av) throws FileFormatException
 547   {
 548   }
 549
 550   /**
 551    * DOCUMENT ME!
 552    *
 553    * @param e
 554    *          DOCUMENT ME!
 555    */
 556   protected void inputTextboxMenuItem_actionPerformed(
 557           AlignmentViewPanel avp)
 558   {
 559   }
 560
 561   /**
 562    * DOCUMENT ME!
 563    */
 564   protected void quit()
 565   {
 566   }
 567
 568   /**
 569    * DOCUMENT ME!
 570    *
 571    * @param e
 572    *          DOCUMENT ME!
 573    */
 574   protected void aboutMenuItem_actionPerformed(ActionEvent e)
 575   {
 576   }
 577
 578   protected void documentationMenuItem_actionPerformed()
 579   {
 580   }
 581
 582   /**
 583    * DOCUMENT ME!
 584    *
 585    * @param e
 586    *          DOCUMENT ME!
 587    */
 588   public void SaveState_actionPerformed(ActionEvent e)
 589   {
 590   }
 591
 592   /**
 593    * DOCUMENT ME!
 594    *
 595    * @param e
 596    *          DOCUMENT ME!
 597    */
 598   protected void preferences_actionPerformed(ActionEvent e)
 599   {
 600   }
 601
 602   public void saveState_actionPerformed()
 603   {
 604   }
 605
 606   public void loadState_actionPerformed()
 607   {
 608   }
 609
 610   public void vamsasStart_actionPerformed(ActionEvent e)
 611   {
 612
 613   }
 614
 615   public void inputSequence_actionPerformed(ActionEvent e)
 616   {
 617
 618   }
 619
 620   public void vamsasStop_actionPerformed(ActionEvent e)
 621   {
 622
 623   }
 624
 625   public void closeAll_actionPerformed(ActionEvent e)
 626   {
 627
 628   }
 629
 630   public void raiseRelated_actionPerformed(ActionEvent e)
 631   {
 632
 633   }
 634
 635   public void minimizeAssociated_actionPerformed(ActionEvent e)
 636   {
 637
 638   }
 639
 640   public void vamsasImport_actionPerformed(ActionEvent e)
 641   {
 642   }
 643 }