src/jalview/jbgui/GPreferences.java

   1 /*\r
   2 * Jalview - A Sequence Alignment Editor and Viewer\r
   3 * Copyright (C) 2005 AM Waterhouse, J Procter, G Barton, M Clamp, S Searle\r
   4 *\r
   5 * This program is free software; you can redistribute it and/or\r
   6 * modify it under the terms of the GNU General Public License\r
   7 * as published by the Free Software Foundation; either version 2\r
   8 * of the License, or (at your option) any later version.\r
   9 *\r
  10 * This program is distributed in the hope that it will be useful,\r
  11 * but WITHOUT ANY WARRANTY; without even the implied warranty of\r
  12 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the\r
  13 * GNU General Public License for more details.\r
  14 *\r
  15 * You should have received a copy of the GNU General Public License\r
  16 * along with this program; if not, write to the Free Software\r
  17 * Foundation, Inc., 51 Franklin Street, Fifth Floor, Boston, MA  02110-1301, USA\r
  18 */\r
  19 package jalview.jbgui;\r
  20 \r
  21 import java.awt.*;\r
  22 \r
  23 import javax.swing.*;\r
  24 import javax.swing.border.TitledBorder;\r
  25 import java.awt.event.*;\r
  26 import javax.swing.event.*;\r
  27 \r
  28 \r
  29 /**\r
  30  * DOCUMENT ME!\r
  31  *\r
  32  * @author $author$\r
  33  * @version $Revision$\r
  34  */\r
  35 public class GPreferences extends JPanel\r
  36 {\r
  37     JTabbedPane tabbedPane = new JTabbedPane();\r
  38 \r
  39     JButton ok = new JButton();\r
  40     JButton cancel = new JButton();\r
  41     JPanel okCancelPanel = new JPanel();\r
  42     BorderLayout borderLayout1 = new BorderLayout();\r
  43     protected JCheckBox quality = new JCheckBox();\r
  44     JPanel visualTab = new JPanel();\r
  45     protected JCheckBox fullID = new JCheckBox();\r
  46     protected JCheckBox fullScreen = new JCheckBox();\r
  47     protected JCheckBox conservation = new JCheckBox();\r
  48     protected JCheckBox identity = new JCheckBox();\r
  49     protected JCheckBox annotations = new JCheckBox();\r
  50     JLabel gapLabel = new JLabel();\r
  51     protected JComboBox colour = new JComboBox();\r
  52     JLabel colourLabel = new JLabel();\r
  53     JLabel fontLabel = new JLabel();\r
  54     protected JComboBox fontSizeCB = new JComboBox();\r
  55     protected JComboBox fontStyleCB = new JComboBox();\r
  56     protected JComboBox fontNameCB = new JComboBox();\r
  57     protected JComboBox gapSymbolCB = new JComboBox();\r
  58     protected JCheckBox startupCheckbox = new JCheckBox();\r
  59     protected JTextField startupFileTextfield = new JTextField();\r
  60   JPanel connectTab = new JPanel();\r
  61   JLabel serverLabel = new JLabel();\r
  62   protected JList linkURLList = new JList();\r
  63   protected JTextField proxyServerTB = new JTextField();\r
  64   protected JTextField proxyPortTB = new JTextField();\r
  65   JLabel portLabel = new JLabel();\r
  66   JLabel browserLabel = new JLabel();\r
  67   protected JTextField defaultBrowser = new JTextField();\r
  68   JButton newLink = new JButton();\r
  69   JButton editLink = new JButton();\r
  70   JButton deleteLink = new JButton();\r
  71   JScrollPane linkScrollPane = new JScrollPane();\r
  72   JPanel linkPanel = new JPanel();\r
  73   BorderLayout borderLayout2 = new BorderLayout();\r
  74   JPanel editLinkButtons = new JPanel();\r
  75   GridLayout gridLayout1 = new GridLayout();\r
  76   protected JList linkNameList = new JList();\r
  77   JPanel linkPanel2 = new JPanel();\r
  78   BorderLayout borderLayout3 = new BorderLayout();\r
  79   protected JCheckBox useProxy = new JCheckBox();\r
  80   JPanel jPanel1 = new JPanel();\r
  81   TitledBorder titledBorder1 = new TitledBorder("Proxy Server");\r
  82   GridBagLayout gridBagLayout2 = new GridBagLayout();\r
  83   GridBagLayout gridBagLayout1 = new GridBagLayout();\r
  84   GridBagLayout gridBagLayout3 = new GridBagLayout();\r
  85   protected JComboBox sortby = new JComboBox();\r
  86   JLabel sortLabel = new JLabel();\r
  87   JPanel jPanel2 = new JPanel();\r
  88   GridLayout gridLayout2 = new GridLayout();\r
  89   JPanel jPanel3 = new JPanel();\r
  90   JPanel exportTab = new JPanel();\r
  91   JLabel epsLabel = new JLabel();\r
  92   protected JComboBox epsRendering = new JComboBox();\r
  93   /**\r
  94      * Creates a new GPreferences object.\r
  95      */\r
  96     public GPreferences()\r
  97     {\r
  98         try\r
  99         {\r
 100             jbInit();\r
 101         }\r
 102         catch (Exception ex)\r
 103         {\r
 104             ex.printStackTrace();\r
 105         }\r
 106     }\r
 107 \r
 108     /**\r
 109      * DOCUMENT ME!\r
 110      *\r
 111      * @throws Exception DOCUMENT ME!\r
 112      */\r
 113     private void jbInit() throws Exception\r
 114     {\r
 115         this.setLayout(borderLayout1);\r
 116         ok.setText("OK");\r
 117         ok.addActionListener(new ActionListener()\r
 118             {\r
 119                 public void actionPerformed(ActionEvent e)\r
 120                 {\r
 121                     ok_actionPerformed(e);\r
 122                 }\r
 123             });\r
 124         cancel.setText("Cancel");\r
 125         cancel.addActionListener(new ActionListener()\r
 126             {\r
 127                 public void actionPerformed(ActionEvent e)\r
 128                 {\r
 129                     cancel_actionPerformed(e);\r
 130                 }\r
 131             });\r
 132         quality.setEnabled(false);\r
 133         quality.setFont(new java.awt.Font("Verdana", Font.PLAIN, 11));\r
 134         quality.setHorizontalAlignment(SwingConstants.RIGHT);\r
 135         quality.setHorizontalTextPosition(SwingConstants.LEFT);\r
 136         quality.setSelected(true);\r
 137         quality.setText("Quality");\r
 138     visualTab.setBorder(new TitledBorder("Open new alignment"));\r
 139     visualTab.setLayout(null);\r
 140         fullID.setFont(new java.awt.Font("Verdana", Font.PLAIN, 11));\r
 141         fullID.setHorizontalAlignment(SwingConstants.RIGHT);\r
 142         fullID.setHorizontalTextPosition(SwingConstants.LEFT);\r
 143     fullID.setMargin(new Insets(4, 2, 2, 0));\r
 144     fullID.setText("Full Sequence ID");\r
 145     fullScreen.setFont(new java.awt.Font("Verdana", Font.PLAIN, 11));\r
 146         fullScreen.setHorizontalAlignment(SwingConstants.RIGHT);\r
 147         fullScreen.setHorizontalTextPosition(SwingConstants.LEFT);\r
 148     fullScreen.setMargin(new Insets(2, 2, 2, 0));\r
 149     fullScreen.setText("Maximise Window");\r
 150     conservation.setEnabled(false);\r
 151         conservation.setFont(new java.awt.Font("Verdana", Font.PLAIN, 11));\r
 152         conservation.setHorizontalAlignment(SwingConstants.RIGHT);\r
 153         conservation.setHorizontalTextPosition(SwingConstants.LEFT);\r
 154         conservation.setSelected(true);\r
 155         conservation.setText("Conservation");\r
 156     identity.setEnabled(false);\r
 157         identity.setFont(new java.awt.Font("Verdana", Font.PLAIN, 11));\r
 158         identity.setHorizontalAlignment(SwingConstants.RIGHT);\r
 159         identity.setHorizontalTextPosition(SwingConstants.LEFT);\r
 160         identity.setSelected(true);\r
 161         identity.setText("Consensus");\r
 162     annotations.setFont(new java.awt.Font("Verdana", Font.PLAIN, 11));\r
 163         annotations.setHorizontalAlignment(SwingConstants.RIGHT);\r
 164         annotations.setHorizontalTextPosition(SwingConstants.LEFT);\r
 165     annotations.setMargin(new Insets(2, 4, 2, 0));\r
 166     annotations.setSelected(true);\r
 167         annotations.setText("Show Annotations");\r
 168     annotations.addActionListener(new ActionListener()\r
 169             {\r
 170                 public void actionPerformed(ActionEvent e)\r
 171                 {\r
 172                     annotations_actionPerformed(e);\r
 173                 }\r
 174             });\r
 175         gapLabel.setFont(new java.awt.Font("Verdana", Font.PLAIN, 11));\r
 176         gapLabel.setHorizontalAlignment(SwingConstants.RIGHT);\r
 177         gapLabel.setText("Gap Symbol ");\r
 178     colour.setFont(new java.awt.Font("Verdana", Font.PLAIN, 11));\r
 179         colour.setBounds(new Rectangle(148, 171, 154, 21));\r
 180         colourLabel.setFont(new java.awt.Font("Verdana", Font.PLAIN, 11));\r
 181         colourLabel.setHorizontalAlignment(SwingConstants.RIGHT);\r
 182         colourLabel.setText("Colour ");\r
 183     fontLabel.setFont(new java.awt.Font("Verdana", Font.PLAIN, 11));\r
 184         fontLabel.setHorizontalAlignment(SwingConstants.RIGHT);\r
 185         fontLabel.setText("Font ");\r
 186     fontSizeCB.setFont(new java.awt.Font("Verdana", Font.PLAIN, 11));\r
 187         fontSizeCB.setBounds(new Rectangle(317, 111, 49, 21));\r
 188         fontStyleCB.setFont(new java.awt.Font("Verdana", Font.PLAIN, 11));\r
 189         fontStyleCB.setBounds(new Rectangle(365, 111, 70, 21));\r
 190         fontNameCB.setFont(new java.awt.Font("Verdana", Font.PLAIN, 11));\r
 191         fontNameCB.setBounds(new Rectangle(148, 111, 169, 21));\r
 192         gapSymbolCB.setFont(new java.awt.Font("Verdana", Font.PLAIN, 11));\r
 193         gapSymbolCB.setBounds(new Rectangle(148, 141, 67, 21));\r
 194         startupCheckbox.setText("Open file");\r
 195     startupCheckbox.setFont(new java.awt.Font("Verdana", Font.PLAIN, 11));\r
 196         startupCheckbox.setHorizontalAlignment(SwingConstants.RIGHT);\r
 197         startupCheckbox.setHorizontalTextPosition(SwingConstants.LEFT);\r
 198         startupCheckbox.setSelected(true);\r
 199         startupFileTextfield.setFont(new java.awt.Font("Verdana", Font.PLAIN, 11));\r
 200         startupFileTextfield.setBounds(new Rectangle(148, 232, 302, 20));\r
 201         startupFileTextfield.addMouseListener(new MouseAdapter()\r
 202             {\r
 203                 public void mouseClicked(MouseEvent e)\r
 204                 {\r
 205                     if (e.getClickCount() > 1)\r
 206                     {\r
 207                         startupFileTextfield_mouseClicked();\r
 208                     }\r
 209                 }\r
 210             });\r
 211 \r
 212      connectTab.setLayout(gridBagLayout3);\r
 213     serverLabel.setText("Address");\r
 214     serverLabel.setHorizontalAlignment(SwingConstants.RIGHT);\r
 215     serverLabel.setFont(new java.awt.Font("Verdana", Font.PLAIN, 11));\r
 216     proxyServerTB.setFont(new java.awt.Font("Verdana", Font.PLAIN, 11));\r
 217     proxyPortTB.setFont(new java.awt.Font("Verdana", Font.PLAIN, 11));\r
 218     portLabel.setFont(new java.awt.Font("Verdana", Font.PLAIN, 11));\r
 219     portLabel.setHorizontalAlignment(SwingConstants.RIGHT);\r
 220     portLabel.setText("Port");\r
 221     browserLabel.setFont(new java.awt.Font("SansSerif", 0, 11));\r
 222     browserLabel.setHorizontalAlignment(SwingConstants.TRAILING);\r
 223     browserLabel.setText("Default Browser (Unix)");\r
 224     defaultBrowser.setFont(new java.awt.Font("Verdana", Font.PLAIN, 11));\r
 225     defaultBrowser.setText("");\r
 226     newLink.setText("New");\r
 227     newLink.addActionListener(new java.awt.event.ActionListener() {\r
 228       public void actionPerformed(ActionEvent e) {\r
 229         newLink_actionPerformed(e);\r
 230       }\r
 231     });\r
 232     editLink.setText("Edit");\r
 233     editLink.addActionListener(new java.awt.event.ActionListener() {\r
 234       public void actionPerformed(ActionEvent e) {\r
 235         editLink_actionPerformed(e);\r
 236       }\r
 237     });\r
 238     deleteLink.setText("Delete");\r
 239     deleteLink.addActionListener(new java.awt.event.ActionListener() {\r
 240       public void actionPerformed(ActionEvent e) {\r
 241         deleteLink_actionPerformed(e);\r
 242       }\r
 243     });\r
 244 \r
 245     linkURLList.addListSelectionListener(new ListSelectionListener()\r
 246          {\r
 247             public void valueChanged(ListSelectionEvent e)\r
 248             {\r
 249                int index = linkURLList.getSelectedIndex();\r
 250                linkNameList.setSelectedIndex(index);\r
 251             }\r
 252          });\r
 253 \r
 254     linkNameList.addListSelectionListener(new ListSelectionListener()\r
 255         {\r
 256           public void valueChanged(ListSelectionEvent e)\r
 257           {\r
 258               int index = linkNameList.getSelectedIndex();\r
 259               linkURLList.setSelectedIndex(index);\r
 260           }\r
 261         });\r
 262 \r
 263     linkScrollPane.setBorder(null);\r
 264     linkPanel.setBorder(new TitledBorder("URL link from Sequence ID"));\r
 265     linkPanel.setLayout(borderLayout2);\r
 266     editLinkButtons.setLayout(gridLayout1);\r
 267     gridLayout1.setRows(3);\r
 268     linkNameList.setFont(new java.awt.Font("Verdana", Font.ITALIC, 11));\r
 269     linkNameList.setSelectionMode(ListSelectionModel.SINGLE_SELECTION);\r
 270     linkPanel2.setLayout(borderLayout3);\r
 271     linkURLList.setFont(new java.awt.Font("Verdana", Font.PLAIN, 11));\r
 272     linkURLList.setSelectionMode(ListSelectionModel.SINGLE_SELECTION);\r
 273 \r
 274     defaultBrowser.addMouseListener(new MouseAdapter()\r
 275     {\r
 276       public void mouseClicked(MouseEvent e)\r
 277       {\r
 278         if (e.getClickCount() > 1)\r
 279             {\r
 280               defaultBrowser_mouseClicked(e);\r
 281             }\r
 282       }\r
 283     });\r
 284     useProxy.setFont(new java.awt.Font("Verdana", Font.PLAIN, 11));\r
 285     useProxy.setHorizontalAlignment(SwingConstants.RIGHT);\r
 286     useProxy.setHorizontalTextPosition(SwingConstants.LEADING);\r
 287     useProxy.setText("Use a proxy server");\r
 288     useProxy.addActionListener(new ActionListener()\r
 289     {\r
 290       public void actionPerformed(ActionEvent e)\r
 291       {\r
 292         useProxy_actionPerformed();\r
 293       }\r
 294     });\r
 295     jPanel1.setBorder(titledBorder1);\r
 296     jPanel1.setLayout(gridBagLayout1);\r
 297     sortby.setFont(new java.awt.Font("Verdana", Font.PLAIN, 11));\r
 298     sortby.setBounds(new Rectangle(148, 200, 302, 21));\r
 299     sortLabel.setFont(new java.awt.Font("Verdana", Font.PLAIN, 11));\r
 300     sortLabel.setHorizontalAlignment(SwingConstants.RIGHT);\r
 301     sortLabel.setText("Sort by ");\r
 302     jPanel2.setBounds(new Rectangle(7, 17, 138, 242));\r
 303     jPanel2.setLayout(gridLayout2);\r
 304     gridLayout2.setRows(8);\r
 305     jPanel3.setBounds(new Rectangle(147, 46, 274, 26));\r
 306     exportTab.setLayout(null);\r
 307     epsLabel.setFont(new java.awt.Font("Verdana", Font.PLAIN, 11));\r
 308     epsLabel.setHorizontalAlignment(SwingConstants.RIGHT);\r
 309     epsLabel.setText("EPS Rendering Style");\r
 310     epsLabel.setBounds(new Rectangle(3, 47, 134, 21));\r
 311     epsRendering.setFont(new java.awt.Font("Verdana", Font.PLAIN, 11));\r
 312     epsRendering.setBounds(new Rectangle(145, 47, 286, 21));\r
 313     jPanel2.add(fullScreen);\r
 314     jPanel2.add(annotations);\r
 315     jPanel2.add(fullID);\r
 316     jPanel2.add(fontLabel);\r
 317     jPanel2.add(gapLabel);\r
 318     jPanel2.add(colourLabel);\r
 319     jPanel2.add(sortLabel);\r
 320     jPanel2.add(startupCheckbox);\r
 321     visualTab.add(jPanel3);\r
 322     jPanel3.add(conservation);\r
 323     jPanel3.add(quality);\r
 324     jPanel3.add(identity);\r
 325     visualTab.add(sortby);\r
 326     visualTab.add(colour);\r
 327     visualTab.add(startupFileTextfield);\r
 328     visualTab.add(fontNameCB);\r
 329     visualTab.add(fontSizeCB);\r
 330     visualTab.add(fontStyleCB);\r
 331     visualTab.add(gapSymbolCB);\r
 332     visualTab.add(jPanel2);\r
 333 \r
 334     linkPanel.add(editLinkButtons, BorderLayout.EAST);\r
 335     editLinkButtons.add(newLink, null);\r
 336     editLinkButtons.add(editLink, null);\r
 337     editLinkButtons.add(deleteLink, null);\r
 338     linkPanel.add(linkScrollPane, BorderLayout.CENTER);\r
 339     linkScrollPane.getViewport().add(linkPanel2, null);\r
 340     linkPanel2.add(linkURLList, BorderLayout.CENTER);\r
 341     linkPanel2.add(linkNameList, BorderLayout.WEST);\r
 342         okCancelPanel.add(ok);\r
 343         okCancelPanel.add(cancel);\r
 344     this.add(tabbedPane, java.awt.BorderLayout.CENTER);\r
 345 \r
 346         this.add(okCancelPanel, java.awt.BorderLayout.SOUTH);\r
 347     jPanel1.add(serverLabel, new GridBagConstraints(0, 1, 1, 1, 0.0, 0.0\r
 348         , GridBagConstraints.WEST, GridBagConstraints.NONE,\r
 349         new Insets(0, 2, 4, 0), 5, 0));\r
 350     jPanel1.add(portLabel, new GridBagConstraints(2, 1, 1, 1, 0.0, 0.0\r
 351                                                   , GridBagConstraints.WEST,\r
 352                                                   GridBagConstraints.NONE,\r
 353                                                   new Insets(0, 0, 4, 0), 11, 6));\r
 354     connectTab.add(linkPanel, new GridBagConstraints(0, 0, 2, 1, 1.0, 1.0\r
 355         , GridBagConstraints.CENTER, GridBagConstraints.BOTH,\r
 356         new Insets(16, 0, 0, 12), 359, -17));\r
 357     connectTab.add(jPanel1, new GridBagConstraints(0, 2, 2, 1, 1.0, 1.0\r
 358         , GridBagConstraints.CENTER, GridBagConstraints.BOTH,\r
 359         new Insets(21, 0, 35, 12), 4, 6));\r
 360     connectTab.add(browserLabel, new GridBagConstraints(0, 1, 1, 1, 0.0, 0.0\r
 361         , GridBagConstraints.WEST, GridBagConstraints.NONE,\r
 362         new Insets(16, 0, 0, 0), 5, 1));\r
 363     jPanel1.add(proxyPortTB, new GridBagConstraints(3, 1, 1, 1, 1.0, 0.0\r
 364         , GridBagConstraints.WEST, GridBagConstraints.HORIZONTAL,\r
 365         new Insets(0, 2, 4, 2), 54, 1));\r
 366     jPanel1.add(proxyServerTB, new GridBagConstraints(1, 1, 1, 1, 1.0, 0.0\r
 367         , GridBagConstraints.WEST, GridBagConstraints.HORIZONTAL,\r
 368         new Insets(0, 2, 4, 0), 263, 1));\r
 369     connectTab.add(defaultBrowser, new GridBagConstraints(1, 1, 1, 1, 1.0, 0.0\r
 370         , GridBagConstraints.WEST, GridBagConstraints.HORIZONTAL,\r
 371         new Insets(15, 0, 0, 15), 307, 1));\r
 372 \r
 373     exportTab.add(epsLabel);\r
 374     exportTab.add(epsRendering);\r
 375 \r
 376     jPanel1.add(useProxy, new GridBagConstraints(0, 0, 2, 1, 0.0, 0.0\r
 377                                                  , GridBagConstraints.WEST,\r
 378                                                  GridBagConstraints.NONE,\r
 379                                                  new Insets(0, 2, 5, 185), 2,\r
 380                                                  -4));\r
 381     DefaultListCellRenderer dlcr = new DefaultListCellRenderer();\r
 382         dlcr.setHorizontalAlignment(DefaultListCellRenderer.CENTER);\r
 383         gapSymbolCB.setRenderer(dlcr);\r
 384 \r
 385     tabbedPane.add(visualTab, "Visual");\r
 386     tabbedPane.add(connectTab, "Connections");\r
 387     tabbedPane.add(exportTab, "Export");\r
 388   }\r
 389 \r
 390     /**\r
 391      * DOCUMENT ME!\r
 392      *\r
 393      * @param e DOCUMENT ME!\r
 394      */\r
 395     public void ok_actionPerformed(ActionEvent e)\r
 396     {\r
 397     }\r
 398 \r
 399     /**\r
 400      * DOCUMENT ME!\r
 401      *\r
 402      * @param e DOCUMENT ME!\r
 403      */\r
 404     public void cancel_actionPerformed(ActionEvent e)\r
 405     {\r
 406     }\r
 407 \r
 408     /**\r
 409      * DOCUMENT ME!\r
 410      *\r
 411      * @param e DOCUMENT ME!\r
 412      */\r
 413     public void annotations_actionPerformed(ActionEvent e)\r
 414     {\r
 415     }\r
 416 \r
 417 \r
 418     /**\r
 419      * DOCUMENT ME!\r
 420      */\r
 421     public void startupFileTextfield_mouseClicked()\r
 422     {\r
 423     }\r
 424 \r
 425 \r
 426   public void newLink_actionPerformed(ActionEvent e) {\r
 427 \r
 428   }\r
 429 \r
 430   public void editLink_actionPerformed(ActionEvent e) {\r
 431 \r
 432   }\r
 433 \r
 434   public void deleteLink_actionPerformed(ActionEvent e) {\r
 435 \r
 436   }\r
 437 \r
 438   public void defaultBrowser_mouseClicked(MouseEvent e)\r
 439   {\r
 440 \r
 441   }\r
 442 \r
 443   public void linkURLList_keyTyped(KeyEvent e)\r
 444   {\r
 445 \r
 446   }\r
 447 \r
 448   public void useProxy_actionPerformed()\r
 449   {\r
 450       proxyServerTB.setEnabled(useProxy.isSelected());\r
 451       proxyPortTB.setEnabled(useProxy.isSelected());\r
 452   }\r
 453 }\r