src/jalview/jbgui/GStructureViewer.java

   1 /*
   2  * Jalview - A Sequence Alignment Editor and Viewer (Version 2.4)
   3  * Copyright (C) 2008 AM Waterhouse, J Procter, G Barton, M Clamp, S Searle
   4  *
   5  * This program is free software; you can redistribute it and/or
   6  * modify it under the terms of the GNU General Public License
   7  * as published by the Free Software Foundation; either version 2
   8  * of the License, or (at your option) any later version.
   9  *
  10  * This program is distributed in the hope that it will be useful,
  11  * but WITHOUT ANY WARRANTY; without even the implied warranty of
  12  * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
  13  * GNU General Public License for more details.
  14  *
  15  * You should have received a copy of the GNU General Public License
  16  * along with this program; if not, write to the Free Software
  17  * Foundation, Inc., 51 Franklin Street, Fifth Floor, Boston, MA  02110-1301, USA
  18  */
  19 package jalview.jbgui;
  20
  21 import javax.swing.*;
  22 import java.awt.event.ActionListener;
  23 import java.awt.event.ActionEvent;
  24
  25 public class GStructureViewer extends JInternalFrame
  26 {
  27   public GStructureViewer()
  28   {
  29     try
  30     {
  31       jbInit();
  32     } catch (Exception ex)
  33     {
  34       ex.printStackTrace();
  35     }
  36   }
  37
  38   private void jbInit() throws Exception
  39   {
  40     this.setJMenuBar(menuBar);
  41     fileMenu.setText("File");
  42     savemenu.setActionCommand("Save Image");
  43     savemenu.setText("Save As");
  44     pdbFile.setText("PDB File");
  45     pdbFile.addActionListener(new ActionListener()
  46     {
  47       public void actionPerformed(ActionEvent actionEvent)
  48       {
  49         pdbFile_actionPerformed(actionEvent);
  50       }
  51     });
  52     png.setText("PNG");
  53     png.addActionListener(new ActionListener()
  54     {
  55       public void actionPerformed(ActionEvent actionEvent)
  56       {
  57         png_actionPerformed(actionEvent);
  58       }
  59     });
  60     eps.setText("EPS");
  61     eps.addActionListener(new ActionListener()
  62     {
  63       public void actionPerformed(ActionEvent actionEvent)
  64       {
  65         eps_actionPerformed(actionEvent);
  66       }
  67     });
  68     viewMapping.setText("View Mapping");
  69     viewMapping.addActionListener(new ActionListener()
  70     {
  71       public void actionPerformed(ActionEvent actionEvent)
  72       {
  73         viewMapping_actionPerformed(actionEvent);
  74       }
  75     });
  76     viewMenu.setText("View");
  77     chainMenu.setText("Show Chain");
  78     colourMenu.setText("Colours");
  79     backGround.setText("Background Colour...");
  80     backGround.addActionListener(new ActionListener()
  81     {
  82       public void actionPerformed(ActionEvent actionEvent)
  83       {
  84         backGround_actionPerformed(actionEvent);
  85       }
  86     });
  87     seqColour.setSelected(true);
  88     seqColour.setText("By Sequence");
  89     seqColour.addActionListener(new ActionListener()
  90     {
  91       public void actionPerformed(ActionEvent actionEvent)
  92       {
  93         seqColour_actionPerformed(actionEvent);
  94       }
  95     });
  96     chainColour.setText("By Chain");
  97     chainColour.addActionListener(new ActionListener()
  98     {
  99       public void actionPerformed(ActionEvent actionEvent)
 100       {
 101         chainColour_actionPerformed(actionEvent);
 102       }
 103     });
 104     chargeColour.setText("Charge & Cysteine");
 105     chargeColour.addActionListener(new ActionListener()
 106     {
 107       public void actionPerformed(ActionEvent actionEvent)
 108       {
 109         chargeColour_actionPerformed(actionEvent);
 110       }
 111     });
 112     zappoColour.setText("Zappo");
 113     zappoColour.addActionListener(new ActionListener()
 114     {
 115       public void actionPerformed(ActionEvent actionEvent)
 116       {
 117         zappoColour_actionPerformed(actionEvent);
 118       }
 119     });
 120     taylorColour.setText("Taylor");
 121     taylorColour.addActionListener(new ActionListener()
 122     {
 123       public void actionPerformed(ActionEvent actionEvent)
 124       {
 125         taylorColour_actionPerformed(actionEvent);
 126       }
 127     });
 128     hydroColour.setText("Hydro");
 129     hydroColour.addActionListener(new ActionListener()
 130     {
 131       public void actionPerformed(ActionEvent actionEvent)
 132       {
 133         hydroColour_actionPerformed(actionEvent);
 134       }
 135     });
 136     strandColour.setText("Strand");
 137     strandColour.addActionListener(new ActionListener()
 138     {
 139       public void actionPerformed(ActionEvent actionEvent)
 140       {
 141         strandColour_actionPerformed(actionEvent);
 142       }
 143     });
 144     helixColour.setText("Helix Propensity");
 145     helixColour.addActionListener(new ActionListener()
 146     {
 147       public void actionPerformed(ActionEvent actionEvent)
 148       {
 149         helixColour_actionPerformed(actionEvent);
 150       }
 151     });
 152     turnColour.setText("Turn Propensity");
 153     turnColour.addActionListener(new ActionListener()
 154     {
 155       public void actionPerformed(ActionEvent actionEvent)
 156       {
 157         turnColour_actionPerformed(actionEvent);
 158       }
 159     });
 160     buriedColour.setText("Buried Index");
 161     buriedColour.addActionListener(new ActionListener()
 162     {
 163       public void actionPerformed(ActionEvent actionEvent)
 164       {
 165         buriedColour_actionPerformed(actionEvent);
 166       }
 167     });
 168     userColour.setText("User Defined ...");
 169     userColour.addActionListener(new ActionListener()
 170     {
 171       public void actionPerformed(ActionEvent actionEvent)
 172       {
 173         userColour_actionPerformed(actionEvent);
 174       }
 175     });
 176     helpMenu.setText("Help");
 177     jmolHelp.setText("Jmol Help");
 178     jmolHelp.addActionListener(new ActionListener()
 179     {
 180       public void actionPerformed(ActionEvent actionEvent)
 181       {
 182         jmolHelp_actionPerformed(actionEvent);
 183       }
 184     });
 185     menuBar.add(fileMenu);
 186     menuBar.add(viewMenu);
 187     menuBar.add(colourMenu);
 188     menuBar.add(helpMenu);
 189     fileMenu.add(savemenu);
 190     fileMenu.add(viewMapping);
 191     savemenu.add(pdbFile);
 192     savemenu.add(png);
 193     savemenu.add(eps);
 194     viewMenu.add(chainMenu);
 195     colourMenu.add(seqColour);
 196     colourMenu.add(chainColour);
 197     colourMenu.add(chargeColour);
 198     colourMenu.add(zappoColour);
 199     colourMenu.add(taylorColour);
 200     colourMenu.add(hydroColour);
 201     colourMenu.add(helixColour);
 202     colourMenu.add(strandColour);
 203     colourMenu.add(turnColour);
 204     colourMenu.add(buriedColour);
 205     colourMenu.add(userColour);
 206     colourMenu.add(backGround);
 207     helpMenu.add(jmolHelp);
 208   }
 209
 210   JMenuBar menuBar = new JMenuBar();
 211
 212   JMenu fileMenu = new JMenu();
 213
 214   JMenu savemenu = new JMenu();
 215
 216   JMenuItem pdbFile = new JMenuItem();
 217
 218   JMenuItem png = new JMenuItem();
 219
 220   JMenuItem eps = new JMenuItem();
 221
 222   JMenuItem viewMapping = new JMenuItem();
 223
 224   JMenu viewMenu = new JMenu();
 225
 226   protected JMenu chainMenu = new JMenu();
 227
 228   JMenu jMenu1 = new JMenu();
 229
 230   JMenu colourMenu = new JMenu();
 231
 232   JMenuItem backGround = new JMenuItem();
 233
 234   protected JCheckBoxMenuItem seqColour = new JCheckBoxMenuItem();
 235
 236   JMenuItem chainColour = new JMenuItem();
 237
 238   JMenuItem chargeColour = new JMenuItem();
 239
 240   JMenuItem zappoColour = new JMenuItem();
 241
 242   JMenuItem taylorColour = new JMenuItem();
 243
 244   JMenuItem hydroColour = new JMenuItem();
 245
 246   JMenuItem strandColour = new JMenuItem();
 247
 248   JMenuItem helixColour = new JMenuItem();
 249
 250   JMenuItem turnColour = new JMenuItem();
 251
 252   JMenuItem buriedColour = new JMenuItem();
 253
 254   JMenuItem userColour = new JMenuItem();
 255
 256   JMenu helpMenu = new JMenu();
 257
 258   JMenuItem jmolHelp = new JMenuItem();
 259
 260   public void pdbFile_actionPerformed(ActionEvent actionEvent)
 261   {
 262
 263   }
 264
 265   public void png_actionPerformed(ActionEvent actionEvent)
 266   {
 267
 268   }
 269
 270   public void eps_actionPerformed(ActionEvent actionEvent)
 271   {
 272
 273   }
 274
 275   public void viewMapping_actionPerformed(ActionEvent actionEvent)
 276   {
 277
 278   }
 279
 280   public void seqColour_actionPerformed(ActionEvent actionEvent)
 281   {
 282
 283   }
 284
 285   public void chainColour_actionPerformed(ActionEvent actionEvent)
 286   {
 287
 288   }
 289
 290   public void chargeColour_actionPerformed(ActionEvent actionEvent)
 291   {
 292
 293   }
 294
 295   public void zappoColour_actionPerformed(ActionEvent actionEvent)
 296   {
 297
 298   }
 299
 300   public void taylorColour_actionPerformed(ActionEvent actionEvent)
 301   {
 302
 303   }
 304
 305   public void hydroColour_actionPerformed(ActionEvent actionEvent)
 306   {
 307
 308   }
 309
 310   public void helixColour_actionPerformed(ActionEvent actionEvent)
 311   {
 312
 313   }
 314
 315   public void strandColour_actionPerformed(ActionEvent actionEvent)
 316   {
 317
 318   }
 319
 320   public void turnColour_actionPerformed(ActionEvent actionEvent)
 321   {
 322
 323   }
 324
 325   public void buriedColour_actionPerformed(ActionEvent actionEvent)
 326   {
 327
 328   }
 329
 330   public void userColour_actionPerformed(ActionEvent actionEvent)
 331   {
 332
 333   }
 334
 335   public void backGround_actionPerformed(ActionEvent actionEvent)
 336   {
 337
 338   }
 339
 340   public void jmolHelp_actionPerformed(ActionEvent actionEvent)
 341   {
 342
 343   }
 344 }