src/jalview/schemabinding/version2/descriptors/JalviewModelSequenceDescriptor.java

   1 /*******************************************************************************
   2  * Jalview - A Sequence Alignment Editor and Viewer (Version 2.7)
   3  * Copyright (C) 2011 J Procter, AM Waterhouse, J Engelhardt, LM Lui, G Barton, M Clamp, S Searle
   4  *
   5  * This file is part of Jalview.
   6  *
   7  * Jalview is free software: you can redistribute it and/or
   8  * modify it under the terms of the GNU General Public License
   9  * as published by the Free Software Foundation, either version 3 of the License, or (at your option) any later version.
  10  *
  11  * Jalview is distributed in the hope that it will be useful, but
  12  * WITHOUT ANY WARRANTY; without even the implied warranty
  13  * of MERCHANTABILITY or FITNESS FOR A PARTICULAR
  14  * PURPOSE.  See the GNU General Public License for more details.
  15  *
  16  * You should have received a copy of the GNU General Public License along with Jalview.  If not, see <http://www.gnu.org/licenses/>.
  17  *******************************************************************************/
  18 /*
  19  * This class was automatically generated with
  20  * <a href="http://www.castor.org">Castor 1.1</a>, using an XML
  21  * Schema.
  22  * $Id$
  23  */
  24
  25 package jalview.schemabinding.version2.descriptors;
  26
  27   //---------------------------------/
  28  //- Imported classes and packages -/
  29 //---------------------------------/
  30
  31 import jalview.schemabinding.version2.JalviewModelSequence;
  32
  33 /**
  34  * Class JalviewModelSequenceDescriptor.
  35  *
  36  * @version $Revision$ $Date$
  37  */
  38 public class JalviewModelSequenceDescriptor extends org.exolab.castor.xml.util.XMLClassDescriptorImpl {
  39
  40
  41       //--------------------------/
  42      //- Class/Member Variables -/
  43     //--------------------------/
  44
  45     /**
  46      * Field _elementDefinition.
  47      */
  48     private boolean _elementDefinition;
  49
  50     /**
  51      * Field _nsPrefix.
  52      */
  53     private java.lang.String _nsPrefix;
  54
  55     /**
  56      * Field _nsURI.
  57      */
  58     private java.lang.String _nsURI;
  59
  60     /**
  61      * Field _xmlName.
  62      */
  63     private java.lang.String _xmlName;
  64
  65
  66       //----------------/
  67      //- Constructors -/
  68     //----------------/
  69
  70     public JalviewModelSequenceDescriptor() {
  71         super();
  72         _nsURI = "www.jalview.org";
  73         _elementDefinition = false;
  74
  75         //-- set grouping compositor
  76         setCompositorAsSequence();
  77         org.exolab.castor.xml.util.XMLFieldDescriptorImpl  desc           = null;
  78         org.exolab.castor.mapping.FieldHandler             handler        = null;
  79         org.exolab.castor.xml.FieldValidator               fieldValidator = null;
  80         //-- initialize attribute descriptors
  81
  82         //-- initialize element descriptors
  83
  84         //-- _JSeqList
  85         desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(jalview.schemabinding.version2.JSeq.class, "_JSeqList", "JSeq", org.exolab.castor.xml.NodeType.Element);
  86         handler = new org.exolab.castor.xml.XMLFieldHandler() {
  87             public java.lang.Object getValue( java.lang.Object object )
  88                 throws IllegalStateException
  89             {
  90                 JalviewModelSequence target = (JalviewModelSequence) object;
  91                 return target.getJSeq();
  92             }
  93             public void setValue( java.lang.Object object, java.lang.Object value)
  94                 throws IllegalStateException, IllegalArgumentException
  95             {
  96                 try {
  97                     JalviewModelSequence target = (JalviewModelSequence) object;
  98                     target.addJSeq( (jalview.schemabinding.version2.JSeq) value);
  99                 } catch (java.lang.Exception ex) {
 100                     throw new IllegalStateException(ex.toString());
 101                 }
 102             }
 103             public void resetValue(Object object) throws IllegalStateException, IllegalArgumentException {
 104                 try {
 105                     JalviewModelSequence target = (JalviewModelSequence) object;
 106                     target.removeAllJSeq();
 107                 } catch (java.lang.Exception ex) {
 108                     throw new IllegalStateException(ex.toString());
 109                 }
 110             }
 111             public java.lang.Object newInstance(java.lang.Object parent) {
 112                 return new jalview.schemabinding.version2.JSeq();
 113             }
 114         };
 115         desc.setHandler(handler);
 116         desc.setNameSpaceURI("www.jalview.org");
 117         desc.setRequired(true);
 118         desc.setMultivalued(true);
 119         addFieldDescriptor(desc);
 120
 121         //-- validation code for: _JSeqList
 122         fieldValidator = new org.exolab.castor.xml.FieldValidator();
 123         fieldValidator.setMinOccurs(1);
 124         { //-- local scope
 125         }
 126         desc.setValidator(fieldValidator);
 127         //-- _JGroupList
 128         desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(jalview.schemabinding.version2.JGroup.class, "_JGroupList", "JGroup", org.exolab.castor.xml.NodeType.Element);
 129         handler = new org.exolab.castor.xml.XMLFieldHandler() {
 130             public java.lang.Object getValue( java.lang.Object object )
 131                 throws IllegalStateException
 132             {
 133                 JalviewModelSequence target = (JalviewModelSequence) object;
 134                 return target.getJGroup();
 135             }
 136             public void setValue( java.lang.Object object, java.lang.Object value)
 137                 throws IllegalStateException, IllegalArgumentException
 138             {
 139                 try {
 140                     JalviewModelSequence target = (JalviewModelSequence) object;
 141                     target.addJGroup( (jalview.schemabinding.version2.JGroup) value);
 142                 } catch (java.lang.Exception ex) {
 143                     throw new IllegalStateException(ex.toString());
 144                 }
 145             }
 146             public void resetValue(Object object) throws IllegalStateException, IllegalArgumentException {
 147                 try {
 148                     JalviewModelSequence target = (JalviewModelSequence) object;
 149                     target.removeAllJGroup();
 150                 } catch (java.lang.Exception ex) {
 151                     throw new IllegalStateException(ex.toString());
 152                 }
 153             }
 154             public java.lang.Object newInstance(java.lang.Object parent) {
 155                 return new jalview.schemabinding.version2.JGroup();
 156             }
 157         };
 158         desc.setHandler(handler);
 159         desc.setNameSpaceURI("www.jalview.org");
 160         desc.setMultivalued(true);
 161         addFieldDescriptor(desc);
 162
 163         //-- validation code for: _JGroupList
 164         fieldValidator = new org.exolab.castor.xml.FieldValidator();
 165         fieldValidator.setMinOccurs(0);
 166         { //-- local scope
 167         }
 168         desc.setValidator(fieldValidator);
 169         //-- _viewportList
 170         desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(jalview.schemabinding.version2.Viewport.class, "_viewportList", "Viewport", org.exolab.castor.xml.NodeType.Element);
 171         handler = new org.exolab.castor.xml.XMLFieldHandler() {
 172             public java.lang.Object getValue( java.lang.Object object )
 173                 throws IllegalStateException
 174             {
 175                 JalviewModelSequence target = (JalviewModelSequence) object;
 176                 return target.getViewport();
 177             }
 178             public void setValue( java.lang.Object object, java.lang.Object value)
 179                 throws IllegalStateException, IllegalArgumentException
 180             {
 181                 try {
 182                     JalviewModelSequence target = (JalviewModelSequence) object;
 183                     target.addViewport( (jalview.schemabinding.version2.Viewport) value);
 184                 } catch (java.lang.Exception ex) {
 185                     throw new IllegalStateException(ex.toString());
 186                 }
 187             }
 188             public void resetValue(Object object) throws IllegalStateException, IllegalArgumentException {
 189                 try {
 190                     JalviewModelSequence target = (JalviewModelSequence) object;
 191                     target.removeAllViewport();
 192                 } catch (java.lang.Exception ex) {
 193                     throw new IllegalStateException(ex.toString());
 194                 }
 195             }
 196             public java.lang.Object newInstance(java.lang.Object parent) {
 197                 return new jalview.schemabinding.version2.Viewport();
 198             }
 199         };
 200         desc.setHandler(handler);
 201         desc.setNameSpaceURI("www.jalview.org");
 202         desc.setRequired(true);
 203         desc.setMultivalued(true);
 204         addFieldDescriptor(desc);
 205
 206         //-- validation code for: _viewportList
 207         fieldValidator = new org.exolab.castor.xml.FieldValidator();
 208         fieldValidator.setMinOccurs(1);
 209         { //-- local scope
 210         }
 211         desc.setValidator(fieldValidator);
 212         //-- _userColoursList
 213         desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(jalview.schemabinding.version2.UserColours.class, "_userColoursList", "UserColours", org.exolab.castor.xml.NodeType.Element);
 214         handler = new org.exolab.castor.xml.XMLFieldHandler() {
 215             public java.lang.Object getValue( java.lang.Object object )
 216                 throws IllegalStateException
 217             {
 218                 JalviewModelSequence target = (JalviewModelSequence) object;
 219                 return target.getUserColours();
 220             }
 221             public void setValue( java.lang.Object object, java.lang.Object value)
 222                 throws IllegalStateException, IllegalArgumentException
 223             {
 224                 try {
 225                     JalviewModelSequence target = (JalviewModelSequence) object;
 226                     target.addUserColours( (jalview.schemabinding.version2.UserColours) value);
 227                 } catch (java.lang.Exception ex) {
 228                     throw new IllegalStateException(ex.toString());
 229                 }
 230             }
 231             public void resetValue(Object object) throws IllegalStateException, IllegalArgumentException {
 232                 try {
 233                     JalviewModelSequence target = (JalviewModelSequence) object;
 234                     target.removeAllUserColours();
 235                 } catch (java.lang.Exception ex) {
 236                     throw new IllegalStateException(ex.toString());
 237                 }
 238             }
 239             public java.lang.Object newInstance(java.lang.Object parent) {
 240                 return new jalview.schemabinding.version2.UserColours();
 241             }
 242         };
 243         desc.setHandler(handler);
 244         desc.setNameSpaceURI("www.jalview.org");
 245         desc.setMultivalued(true);
 246         addFieldDescriptor(desc);
 247
 248         //-- validation code for: _userColoursList
 249         fieldValidator = new org.exolab.castor.xml.FieldValidator();
 250         fieldValidator.setMinOccurs(0);
 251         { //-- local scope
 252         }
 253         desc.setValidator(fieldValidator);
 254         //-- _treeList
 255         desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(jalview.schemabinding.version2.Tree.class, "_treeList", "tree", org.exolab.castor.xml.NodeType.Element);
 256         handler = new org.exolab.castor.xml.XMLFieldHandler() {
 257             public java.lang.Object getValue( java.lang.Object object )
 258                 throws IllegalStateException
 259             {
 260                 JalviewModelSequence target = (JalviewModelSequence) object;
 261                 return target.getTree();
 262             }
 263             public void setValue( java.lang.Object object, java.lang.Object value)
 264                 throws IllegalStateException, IllegalArgumentException
 265             {
 266                 try {
 267                     JalviewModelSequence target = (JalviewModelSequence) object;
 268                     target.addTree( (jalview.schemabinding.version2.Tree) value);
 269                 } catch (java.lang.Exception ex) {
 270                     throw new IllegalStateException(ex.toString());
 271                 }
 272             }
 273             public void resetValue(Object object) throws IllegalStateException, IllegalArgumentException {
 274                 try {
 275                     JalviewModelSequence target = (JalviewModelSequence) object;
 276                     target.removeAllTree();
 277                 } catch (java.lang.Exception ex) {
 278                     throw new IllegalStateException(ex.toString());
 279                 }
 280             }
 281             public java.lang.Object newInstance(java.lang.Object parent) {
 282                 return new jalview.schemabinding.version2.Tree();
 283             }
 284         };
 285         desc.setHandler(handler);
 286         desc.setNameSpaceURI("www.jalview.org");
 287         desc.setMultivalued(true);
 288         addFieldDescriptor(desc);
 289
 290         //-- validation code for: _treeList
 291         fieldValidator = new org.exolab.castor.xml.FieldValidator();
 292         fieldValidator.setMinOccurs(0);
 293         { //-- local scope
 294         }
 295         desc.setValidator(fieldValidator);
 296         //-- _featureSettings
 297         desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(jalview.schemabinding.version2.FeatureSettings.class, "_featureSettings", "FeatureSettings", org.exolab.castor.xml.NodeType.Element);
 298         handler = new org.exolab.castor.xml.XMLFieldHandler() {
 299             public java.lang.Object getValue( java.lang.Object object )
 300                 throws IllegalStateException
 301             {
 302                 JalviewModelSequence target = (JalviewModelSequence) object;
 303                 return target.getFeatureSettings();
 304             }
 305             public void setValue( java.lang.Object object, java.lang.Object value)
 306                 throws IllegalStateException, IllegalArgumentException
 307             {
 308                 try {
 309                     JalviewModelSequence target = (JalviewModelSequence) object;
 310                     target.setFeatureSettings( (jalview.schemabinding.version2.FeatureSettings) value);
 311                 } catch (java.lang.Exception ex) {
 312                     throw new IllegalStateException(ex.toString());
 313                 }
 314             }
 315             public java.lang.Object newInstance(java.lang.Object parent) {
 316                 return new jalview.schemabinding.version2.FeatureSettings();
 317             }
 318         };
 319         desc.setHandler(handler);
 320         desc.setNameSpaceURI("www.jalview.org");
 321         desc.setMultivalued(false);
 322         addFieldDescriptor(desc);
 323
 324         //-- validation code for: _featureSettings
 325         fieldValidator = new org.exolab.castor.xml.FieldValidator();
 326         { //-- local scope
 327         }
 328         desc.setValidator(fieldValidator);
 329     }
 330
 331
 332       //-----------/
 333      //- Methods -/
 334     //-----------/
 335
 336     /**
 337      * Method getAccessMode.
 338      *
 339      * @return the access mode specified for this class.
 340      */
 341     public org.exolab.castor.mapping.AccessMode getAccessMode(
 342     ) {
 343         return null;
 344     }
 345
 346     /**
 347      * Method getIdentity.
 348      *
 349      * @return the identity field, null if this class has no
 350      * identity.
 351      */
 352     public org.exolab.castor.mapping.FieldDescriptor getIdentity(
 353     ) {
 354         return super.getIdentity();
 355     }
 356
 357     /**
 358      * Method getJavaClass.
 359      *
 360      * @return the Java class represented by this descriptor.
 361      */
 362     public java.lang.Class getJavaClass(
 363     ) {
 364         return jalview.schemabinding.version2.JalviewModelSequence.class;
 365     }
 366
 367     /**
 368      * Method getNameSpacePrefix.
 369      *
 370      * @return the namespace prefix to use when marshaling as XML.
 371      */
 372     public java.lang.String getNameSpacePrefix(
 373     ) {
 374         return _nsPrefix;
 375     }
 376
 377     /**
 378      * Method getNameSpaceURI.
 379      *
 380      * @return the namespace URI used when marshaling and
 381      * unmarshaling as XML.
 382      */
 383     public java.lang.String getNameSpaceURI(
 384     ) {
 385         return _nsURI;
 386     }
 387
 388     /**
 389      * Method getValidator.
 390      *
 391      * @return a specific validator for the class described by this
 392      * ClassDescriptor.
 393      */
 394     public org.exolab.castor.xml.TypeValidator getValidator(
 395     ) {
 396         return this;
 397     }
 398
 399     /**
 400      * Method getXMLName.
 401      *
 402      * @return the XML Name for the Class being described.
 403      */
 404     public java.lang.String getXMLName(
 405     ) {
 406         return _xmlName;
 407     }
 408
 409     /**
 410      * Method isElementDefinition.
 411      *
 412      * @return true if XML schema definition of this Class is that
 413      * of a global
 414      * element or element with anonymous type definition.
 415      */
 416     public boolean isElementDefinition(
 417     ) {
 418         return _elementDefinition;
 419     }
 420
 421 }