4 package jalview.ext.jmol;
6 import static org.junit.Assert.*;
8 import java.util.Vector;
10 import jalview.datamodel.SequenceI;
12 import org.junit.Test;
18 public class PDBFileWithJmolTest
22 public void test() throws Exception
24 PDBFileWithJmol jtest=new PDBFileWithJmol("./examples/1vsp", jalview.io.AppletFormatAdapter.FILE);
25 Vector<SequenceI> seqs=jtest.getSeqs();
26 assertTrue("No sequences extracted from testfile", seqs!=null && seqs.size()>0);
27 assertTrue("No annotation generated.", seqs.get(0).getAnnotation()!=null && seqs.get(0).getAnnotation().length!=0);