test/jalview/gui/SequenceRendererTest.java

   1 package jalview.gui;
   2
   3 import static org.testng.AssertJUnit.assertEquals;
   4
   5 import jalview.datamodel.Alignment;
   6 import jalview.datamodel.AlignmentI;
   7 import jalview.datamodel.Sequence;
   8 import jalview.datamodel.SequenceI;
   9 import jalview.schemes.ZappoColourScheme;
  10
  11 import java.awt.Color;
  12
  13 import org.testng.annotations.Test;
  14
  15 public class SequenceRendererTest
  16 {
  17
  18   @Test
  19   public void testGetResidueBoxColour_zappo()
  20   {
  21     SequenceI seq = new Sequence("name", "MATVLGSPRAPAFF"); // FER1_MAIZE...
  22     AlignmentI al = new Alignment(new SequenceI[]
  23       { seq });
  24     final AlignViewport av = new AlignViewport(al);
  25     SequenceRenderer sr = new SequenceRenderer(av);
  26     av.setGlobalColourScheme(new ZappoColourScheme());
  27
  28     // @see ResidueProperties.zappo
  29     assertEquals(Color.pink, sr.getResidueColour(seq, 0, null)); // M
  30     assertEquals(Color.green, sr.getResidueColour(seq, 2, null)); // T
  31     assertEquals(Color.magenta, sr.getResidueColour(seq, 5, null)); // G
  32     assertEquals(Color.orange, sr.getResidueColour(seq, 12, null)); // F
  33   }
  34   // TODO more tests for getResidueBoxColour covering groups, feature rendering,
  35   // gaps, overview...
  36
  37 }