test/jalview/gui/SequenceRendererTest.java

   1 package jalview.gui;
   2
   3 import static org.testng.AssertJUnit.assertEquals;
   4 import org.testng.annotations.Test;
   5 import jalview.datamodel.Alignment;
   6 import jalview.datamodel.AlignmentI;
   7 import jalview.datamodel.Sequence;
   8 import jalview.datamodel.SequenceI;
   9 import jalview.schemes.ZappoColourScheme;
  10
  11 import java.awt.Color;
  12
  13 public class SequenceRendererTest
  14 {
  15
  16   @Test
  17   public void testGetResidueBoxColour_zappo()
  18   {
  19     SequenceI seq = new Sequence("name", "MATVLGSPRAPAFF"); // FER1_MAIZE...
  20     AlignmentI al = new Alignment(new SequenceI[]
  21       { seq });
  22     final AlignViewport av = new AlignViewport(al);
  23     SequenceRenderer sr = new SequenceRenderer(av);
  24     av.setGlobalColourScheme(new ZappoColourScheme());
  25
  26     // @see ResidueProperties.zappo
  27     assertEquals(Color.pink, sr.getResidueColour(seq, 0, null)); // M
  28     assertEquals(Color.green, sr.getResidueColour(seq, 2, null)); // T
  29     assertEquals(Color.magenta, sr.getResidueColour(seq, 5, null)); // G
  30     assertEquals(Color.orange, sr.getResidueColour(seq, 12, null)); // F
  31   }
  32   // TODO more tests for getResidueBoxColour covering groups, feature rendering,
  33   // gaps, overview...
  34
  35 }