test/jalview/schemes/ScoreMatrixPrinter.java

   1 package jalview.schemes;
   2
   3 import java.util.Map;
   4
   5 import org.junit.Test;
   6
   7
   8 public class ScoreMatrixPrinter
   9 {
  10   @Test
  11   public void printAllMatrices()
  12   {
  13     for (Map.Entry<String,ScoreMatrix> sm:((Map<String, ScoreMatrix>) ResidueProperties.scoreMatrices).entrySet())
  14     {
  15       System.out.println("Matrix "+sm.getKey());
  16       System.out.println(sm.getValue().toString());
  17     }
  18   }
  19   @Test
  20   public void printHTMLMatrices()
  21   {
  22     for (Map.Entry<String,ScoreMatrix> sm:((Map<String, ScoreMatrix>) ResidueProperties.scoreMatrices).entrySet())
  23     {
  24       System.out.println("Matrix "+sm.getKey());
  25       System.out.println(sm.getValue().outputMatrix(true));
  26     }
  27   }
  28
  29 }