JAL-1645 rejig biojson/biojsmsa docs

[jalview.git] / help / html / features / biojsmsa.html

diff --git a/help/html/features/biojsmsa.html b/help/html/features/biojsmsa.html
index ff4d8da..f97c7b3 100644 (file)
--- a/help/html/features/biojsmsa.html
+++ b/help/html/features/biojsmsa.html
@@ -5,18 +5,24 @@
     <strong>Exporting Alignments for viewing with the BioJS MSA
       Viewer</strong>
   </p>
-  <p>Since Jalview 2.9, HTML files can be generated from an
-    alignment within the Jalview desktop application that show the
-    alignment in an interactive viewer called 'BioJS-MSA'. The BioJS MSA
-    Viewer is a full-featured JavaScript based multiple sequence
-    alignment visualisation system created by a community of biological
-    data visualisation developers, and is developed independently of
-    Jalview.</p>
+  <p>
+    Since Jalview 2.9, HTML files can be generated from an alignment
+    within the Jalview desktop application that show the alignment in an
+    interactive viewer called 'BioJS-MSA'. These pages embed Jalview's
+    alignment data as <a href="bioJsonFormat.html">BioJSON</a>, which
+    can be imported back into Jalview, and also interpreted by the BioJS
+    MSA viewer. The BioJS MSA Viewer is a full-featured JavaScript based
+    multiple sequence alignment visualisation system created by a
+    community of biological data visualisation developers, and is
+    developed independently of Jalview.
+  </p>
   <p>
     To find out more about the BioJS MSA Viewer, please go to <a
       href="http://msa.biojs.net/">http://msa.biojs.net/</a>.
+  </p>
+
   <p>
-    <strong>Making sure your BioJS MSA exports uses the latest
+    <strong>Making sure your BioJS MSA export uses the latest
       BioJS MSA Viewer</strong>
   </p>
   <p>In order to allow Jalview to export data with the latest