JAL-1620 version bump and release notes

[jalview.git] / src / jalview / gui / RedundancyPanel.java

diff --git a/src/jalview/gui/RedundancyPanel.java b/src/jalview/gui/RedundancyPanel.java
index 693dc37..44583ba 100755 (executable)
--- a/src/jalview/gui/RedundancyPanel.java
+++ b/src/jalview/gui/RedundancyPanel.java
@@ -1,5 +1,5 @@
 /*
- * Jalview - A Sequence Alignment Editor and Viewer (Version 2.8.2)
+ * Jalview - A Sequence Alignment Editor and Viewer (Version 2.8.2b1)
  * Copyright (C) 2014 The Jalview Authors
  * 
  * This file is part of Jalview.
@@ -20,18 +20,28 @@
  */
 package jalview.gui;
 
-import java.util.*;
-
-import java.awt.event.*;
-import javax.swing.*;
-import javax.swing.event.*;
-
 import jalview.analysis.AlignSeq;
-import jalview.commands.*;
-import jalview.datamodel.*;
-import jalview.jbgui.*;
+import jalview.commands.CommandI;
+import jalview.commands.EditCommand;
+import jalview.commands.EditCommand.Action;
+import jalview.datamodel.SequenceGroup;
+import jalview.datamodel.SequenceI;
+import jalview.jbgui.GSliderPanel;
 import jalview.util.MessageManager;
 
+import java.awt.event.ActionEvent;
+import java.util.ArrayList;
+import java.util.List;
+import java.util.Stack;
+import java.util.Vector;
+
+import javax.swing.JInternalFrame;
+import javax.swing.JProgressBar;
+import javax.swing.event.ChangeEvent;
+import javax.swing.event.ChangeListener;
+import javax.swing.event.InternalFrameAdapter;
+import javax.swing.event.InternalFrameEvent;
+
 /**
  * DOCUMENT ME!
  * 
@@ -44,7 +54,9 @@ public class RedundancyPanel extends GSliderPanel implements Runnable
 
   AlignmentPanel ap;
 
-  Stack historyList = new Stack(); // simpler than synching with alignFrame.
+  Stack<CommandI> historyList = new Stack<CommandI>();
+
+  // simpler than synching with alignFrame.
 
   float[] redundancy;
 
@@ -229,7 +241,7 @@ public class RedundancyPanel extends GSliderPanel implements Runnable
       }
 
       EditCommand cut = new EditCommand(MessageManager.getString("action.remove_redundancy"),
-              EditCommand.CUT, deleted, 0, width, ap.av.getAlignment());
+              Action.CUT, deleted, 0, width, ap.av.getAlignment());
 
       for (int i = 0; i < del.size(); i++)
       {
@@ -258,11 +270,15 @@ public class RedundancyPanel extends GSliderPanel implements Runnable
    */
   public void undoButton_actionPerformed(ActionEvent e)
   {
-    CommandI command = (CommandI) historyList.pop();
-    command.undoCommand(af.getViewAlignments());
-
+    if(historyList == null || historyList.isEmpty()){
+        undoButton.setEnabled(false);
+       return;
+    }
+    
+    CommandI command = historyList.pop();
     if (ap.av.historyList.contains(command))
     {
+      command.undoCommand(af.getViewAlignments());
       ap.av.historyList.remove(command);
       ap.av.firePropertyChange("alignment", null, ap.av.getAlignment().getSequences());
       af.updateEditMenuBar();