/*\r
- * Jalview - A Sequence Alignment Editor and Viewer (Version 2.4)\r
- * Copyright (C) 2008 AM Waterhouse, J Procter, G Barton, M Clamp, S Searle\r
+ * Jalview - A Sequence Alignment Editor and Viewer (Version 2.4.1)\r
+ * Copyright (C) 2009 AM Waterhouse, J Procter, G Barton, M Clamp, S Searle\r
* \r
* This program is free software; you can redistribute it and/or\r
* modify it under the terms of the GNU General Public License\r
*/\r
package jalview.schemabinding.version2;\r
\r
-// ---------------------------------/\r
-// - Imported classes and packages -/\r
-// ---------------------------------/\r
+ //---------------------------------/\r
+ //- Imported classes and packages -/\r
+//---------------------------------/\r
\r
import org.exolab.castor.xml.Marshaller;\r
import org.exolab.castor.xml.Unmarshaller;\r
* \r
* @version $Revision$ $Date$\r
*/\r
-public class FeatureSettings implements java.io.Serializable\r
-{\r
-\r
- // --------------------------/\r
- // - Class/Member Variables -/\r
- // --------------------------/\r
-\r
- /**\r
- * Field _settingList.\r
- */\r
- private java.util.Vector _settingList;\r
-\r
- /**\r
- * Field _groupList.\r
- */\r
- private java.util.Vector _groupList;\r
-\r
- // ----------------/\r
- // - Constructors -/\r
- // ----------------/\r
-\r
- public FeatureSettings()\r
- {\r
- super();\r
- this._settingList = new java.util.Vector();\r
- this._groupList = new java.util.Vector();\r
- }\r
-\r
- // -----------/\r
- // - Methods -/\r
- // -----------/\r
-\r
- /**\r
- * \r
- * \r
- * @param vGroup\r
- * @throws java.lang.IndexOutOfBoundsException\r
- * if the index given is outside the bounds of the collection\r
- */\r
- public void addGroup(final jalview.schemabinding.version2.Group vGroup)\r
- throws java.lang.IndexOutOfBoundsException\r
- {\r
- this._groupList.addElement(vGroup);\r
- }\r
-\r
- /**\r
- * \r
- * \r
- * @param index\r
- * @param vGroup\r
- * @throws java.lang.IndexOutOfBoundsException\r
- * if the index given is outside the bounds of the collection\r
- */\r
- public void addGroup(final int index,\r
- final jalview.schemabinding.version2.Group vGroup)\r
- throws java.lang.IndexOutOfBoundsException\r
- {\r
- this._groupList.add(index, vGroup);\r
- }\r
-\r
- /**\r
- * \r
- * \r
- * @param vSetting\r
- * @throws java.lang.IndexOutOfBoundsException\r
- * if the index given is outside the bounds of the collection\r
- */\r
- public void addSetting(\r
- final jalview.schemabinding.version2.Setting vSetting)\r
- throws java.lang.IndexOutOfBoundsException\r
- {\r
- this._settingList.addElement(vSetting);\r
- }\r
-\r
- /**\r
- * \r
- * \r
- * @param index\r
- * @param vSetting\r
- * @throws java.lang.IndexOutOfBoundsException\r
- * if the index given is outside the bounds of the collection\r
- */\r
- public void addSetting(final int index,\r
- final jalview.schemabinding.version2.Setting vSetting)\r
- throws java.lang.IndexOutOfBoundsException\r
- {\r
- this._settingList.add(index, vSetting);\r
- }\r
-\r
- /**\r
- * Method enumerateGroup.\r
- * \r
- * @return an Enumeration over all jalview.schemabinding.version2.Group\r
- * elements\r
- */\r
- public java.util.Enumeration enumerateGroup()\r
- {\r
- return this._groupList.elements();\r
- }\r
-\r
- /**\r
- * Method enumerateSetting.\r
- * \r
- * @return an Enumeration over all jalview.schemabinding.version2.Setting\r
- * elements\r
- */\r
- public java.util.Enumeration enumerateSetting()\r
- {\r
- return this._settingList.elements();\r
- }\r
-\r
- /**\r
- * Method getGroup.\r
- * \r
- * @param index\r
- * @throws java.lang.IndexOutOfBoundsException\r
- * if the index given is outside the bounds of the collection\r
- * @return the value of the jalview.schemabinding.version2.Group at the given\r
- * index\r
- */\r
- public jalview.schemabinding.version2.Group getGroup(final int index)\r
- throws java.lang.IndexOutOfBoundsException\r
- {\r
- // check bounds for index\r
- if (index < 0 || index >= this._groupList.size())\r
- {\r
- throw new IndexOutOfBoundsException("getGroup: Index value '" + index\r
- + "' not in range [0.." + (this._groupList.size() - 1) + "]");\r
+public class FeatureSettings implements java.io.Serializable {\r
+\r
+\r
+ //--------------------------/\r
+ //- Class/Member Variables -/\r
+ //--------------------------/\r
+\r
+ /**\r
+ * Field _settingList.\r
+ */\r
+ private java.util.Vector _settingList;\r
+\r
+ /**\r
+ * Field _groupList.\r
+ */\r
+ private java.util.Vector _groupList;\r
+\r
+\r
+ //----------------/\r
+ //- Constructors -/\r
+ //----------------/\r
+\r
+ public FeatureSettings() {\r
+ super();\r
+ this._settingList = new java.util.Vector();\r
+ this._groupList = new java.util.Vector();\r
+ }\r
+\r
+\r
+ //-----------/\r
+ //- Methods -/\r
+ //-----------/\r
+\r
+ /**\r
+ * \r
+ * \r
+ * @param vGroup\r
+ * @throws java.lang.IndexOutOfBoundsException if the index\r
+ * given is outside the bounds of the collection\r
+ */\r
+ public void addGroup(\r
+ final jalview.schemabinding.version2.Group vGroup)\r
+ throws java.lang.IndexOutOfBoundsException {\r
+ this._groupList.addElement(vGroup);\r
+ }\r
+\r
+ /**\r
+ * \r
+ * \r
+ * @param index\r
+ * @param vGroup\r
+ * @throws java.lang.IndexOutOfBoundsException if the index\r
+ * given is outside the bounds of the collection\r
+ */\r
+ public void addGroup(\r
+ final int index,\r
+ final jalview.schemabinding.version2.Group vGroup)\r
+ throws java.lang.IndexOutOfBoundsException {\r
+ this._groupList.add(index, vGroup);\r
+ }\r
+\r
+ /**\r
+ * \r
+ * \r
+ * @param vSetting\r
+ * @throws java.lang.IndexOutOfBoundsException if the index\r
+ * given is outside the bounds of the collection\r
+ */\r
+ public void addSetting(\r
+ final jalview.schemabinding.version2.Setting vSetting)\r
+ throws java.lang.IndexOutOfBoundsException {\r
+ this._settingList.addElement(vSetting);\r
+ }\r
+\r
+ /**\r
+ * \r
+ * \r
+ * @param index\r
+ * @param vSetting\r
+ * @throws java.lang.IndexOutOfBoundsException if the index\r
+ * given is outside the bounds of the collection\r
+ */\r
+ public void addSetting(\r
+ final int index,\r
+ final jalview.schemabinding.version2.Setting vSetting)\r
+ throws java.lang.IndexOutOfBoundsException {\r
+ this._settingList.add(index, vSetting);\r
+ }\r
+\r
+ /**\r
+ * Method enumerateGroup.\r
+ * \r
+ * @return an Enumeration over all\r
+ * jalview.schemabinding.version2.Group elements\r
+ */\r
+ public java.util.Enumeration enumerateGroup(\r
+ ) {\r
+ return this._groupList.elements();\r
+ }\r
+\r
+ /**\r
+ * Method enumerateSetting.\r
+ * \r
+ * @return an Enumeration over all\r
+ * jalview.schemabinding.version2.Setting elements\r
+ */\r
+ public java.util.Enumeration enumerateSetting(\r
+ ) {\r
+ return this._settingList.elements();\r
+ }\r
+\r
+ /**\r
+ * Method getGroup.\r
+ * \r
+ * @param index\r
+ * @throws java.lang.IndexOutOfBoundsException if the index\r
+ * given is outside the bounds of the collection\r
+ * @return the value of the\r
+ * jalview.schemabinding.version2.Group at the given index\r
+ */\r
+ public jalview.schemabinding.version2.Group getGroup(\r
+ final int index)\r
+ throws java.lang.IndexOutOfBoundsException {\r
+ // check bounds for index\r
+ if (index < 0 || index >= this._groupList.size()) {\r
+ throw new IndexOutOfBoundsException("getGroup: Index value '" + index + "' not in range [0.." + (this._groupList.size() - 1) + "]");\r
+ }\r
+ \r
+ return (jalview.schemabinding.version2.Group) _groupList.get(index);\r
+ }\r
+\r
+ /**\r
+ * Method getGroup.Returns the contents of the collection in an\r
+ * Array. <p>Note: Just in case the collection contents are\r
+ * changing in another thread, we pass a 0-length Array of the\r
+ * correct type into the API call. This way we <i>know</i>\r
+ * that the Array returned is of exactly the correct length.\r
+ * \r
+ * @return this collection as an Array\r
+ */\r
+ public jalview.schemabinding.version2.Group[] getGroup(\r
+ ) {\r
+ jalview.schemabinding.version2.Group[] array = new jalview.schemabinding.version2.Group[0];\r
+ return (jalview.schemabinding.version2.Group[]) this._groupList.toArray(array);\r
+ }\r
+\r
+ /**\r
+ * Method getGroupCount.\r
+ * \r
+ * @return the size of this collection\r
+ */\r
+ public int getGroupCount(\r
+ ) {\r
+ return this._groupList.size();\r
}\r
\r
- return (jalview.schemabinding.version2.Group) _groupList.get(index);\r
- }\r
-\r
- /**\r
- * Method getGroup.Returns the contents of the collection in an Array.\r
- * <p>\r
- * Note: Just in case the collection contents are changing in another thread,\r
- * we pass a 0-length Array of the correct type into the API call. This way we\r
- * <i>know</i> that the Array returned is of exactly the correct length.\r
- * \r
- * @return this collection as an Array\r
- */\r
- public jalview.schemabinding.version2.Group[] getGroup()\r
- {\r
- jalview.schemabinding.version2.Group[] array = new jalview.schemabinding.version2.Group[0];\r
- return (jalview.schemabinding.version2.Group[]) this._groupList\r
- .toArray(array);\r
- }\r
-\r
- /**\r
- * Method getGroupCount.\r
- * \r
- * @return the size of this collection\r
- */\r
- public int getGroupCount()\r
- {\r
- return this._groupList.size();\r
- }\r
-\r
- /**\r
- * Method getSetting.\r
- * \r
- * @param index\r
- * @throws java.lang.IndexOutOfBoundsException\r
- * if the index given is outside the bounds of the collection\r
- * @return the value of the jalview.schemabinding.version2.Setting at the\r
- * given index\r
- */\r
- public jalview.schemabinding.version2.Setting getSetting(final int index)\r
- throws java.lang.IndexOutOfBoundsException\r
- {\r
- // check bounds for index\r
- if (index < 0 || index >= this._settingList.size())\r
- {\r
- throw new IndexOutOfBoundsException("getSetting: Index value '"\r
- + index + "' not in range [0.."\r
- + (this._settingList.size() - 1) + "]");\r
+ /**\r
+ * Method getSetting.\r
+ * \r
+ * @param index\r
+ * @throws java.lang.IndexOutOfBoundsException if the index\r
+ * given is outside the bounds of the collection\r
+ * @return the value of the\r
+ * jalview.schemabinding.version2.Setting at the given index\r
+ */\r
+ public jalview.schemabinding.version2.Setting getSetting(\r
+ final int index)\r
+ throws java.lang.IndexOutOfBoundsException {\r
+ // check bounds for index\r
+ if (index < 0 || index >= this._settingList.size()) {\r
+ throw new IndexOutOfBoundsException("getSetting: Index value '" + index + "' not in range [0.." + (this._settingList.size() - 1) + "]");\r
+ }\r
+ \r
+ return (jalview.schemabinding.version2.Setting) _settingList.get(index);\r
}\r
\r
- return (jalview.schemabinding.version2.Setting) _settingList.get(index);\r
- }\r
-\r
- /**\r
- * Method getSetting.Returns the contents of the collection in an Array.\r
- * <p>\r
- * Note: Just in case the collection contents are changing in another thread,\r
- * we pass a 0-length Array of the correct type into the API call. This way we\r
- * <i>know</i> that the Array returned is of exactly the correct length.\r
- * \r
- * @return this collection as an Array\r
- */\r
- public jalview.schemabinding.version2.Setting[] getSetting()\r
- {\r
- jalview.schemabinding.version2.Setting[] array = new jalview.schemabinding.version2.Setting[0];\r
- return (jalview.schemabinding.version2.Setting[]) this._settingList\r
- .toArray(array);\r
- }\r
-\r
- /**\r
- * Method getSettingCount.\r
- * \r
- * @return the size of this collection\r
- */\r
- public int getSettingCount()\r
- {\r
- return this._settingList.size();\r
- }\r
-\r
- /**\r
- * Method isValid.\r
- * \r
- * @return true if this object is valid according to the schema\r
- */\r
- public boolean isValid()\r
- {\r
- try\r
- {\r
- validate();\r
- } catch (org.exolab.castor.xml.ValidationException vex)\r
- {\r
- return false;\r
+ /**\r
+ * Method getSetting.Returns the contents of the collection in\r
+ * an Array. <p>Note: Just in case the collection contents\r
+ * are changing in another thread, we pass a 0-length Array of\r
+ * the correct type into the API call. This way we <i>know</i>\r
+ * that the Array returned is of exactly the correct length.\r
+ * \r
+ * @return this collection as an Array\r
+ */\r
+ public jalview.schemabinding.version2.Setting[] getSetting(\r
+ ) {\r
+ jalview.schemabinding.version2.Setting[] array = new jalview.schemabinding.version2.Setting[0];\r
+ return (jalview.schemabinding.version2.Setting[]) this._settingList.toArray(array);\r
}\r
- return true;\r
- }\r
-\r
- /**\r
- * \r
- * \r
- * @param out\r
- * @throws org.exolab.castor.xml.MarshalException\r
- * if object is null or if any SAXException is thrown during\r
- * marshaling\r
- * @throws org.exolab.castor.xml.ValidationException\r
- * if this object is an invalid instance according to the\r
- * schema\r
- */\r
- public void marshal(final java.io.Writer out)\r
- throws org.exolab.castor.xml.MarshalException,\r
- org.exolab.castor.xml.ValidationException\r
- {\r
- Marshaller.marshal(this, out);\r
- }\r
-\r
- /**\r
- * \r
- * \r
- * @param handler\r
- * @throws java.io.IOException\r
- * if an IOException occurs during marshaling\r
- * @throws org.exolab.castor.xml.ValidationException\r
- * if this object is an invalid instance according to the\r
- * schema\r
- * @throws org.exolab.castor.xml.MarshalException\r
- * if object is null or if any SAXException is thrown during\r
- * marshaling\r
- */\r
- public void marshal(final org.xml.sax.ContentHandler handler)\r
- throws java.io.IOException,\r
- org.exolab.castor.xml.MarshalException,\r
- org.exolab.castor.xml.ValidationException\r
- {\r
- Marshaller.marshal(this, handler);\r
- }\r
-\r
- /**\r
- */\r
- public void removeAllGroup()\r
- {\r
- this._groupList.clear();\r
- }\r
-\r
- /**\r
- */\r
- public void removeAllSetting()\r
- {\r
- this._settingList.clear();\r
- }\r
-\r
- /**\r
- * Method removeGroup.\r
- * \r
- * @param vGroup\r
- * @return true if the object was removed from the collection.\r
- */\r
- public boolean removeGroup(\r
- final jalview.schemabinding.version2.Group vGroup)\r
- {\r
- boolean removed = _groupList.remove(vGroup);\r
- return removed;\r
- }\r
-\r
- /**\r
- * Method removeGroupAt.\r
- * \r
- * @param index\r
- * @return the element removed from the collection\r
- */\r
- public jalview.schemabinding.version2.Group removeGroupAt(final int index)\r
- {\r
- java.lang.Object obj = this._groupList.remove(index);\r
- return (jalview.schemabinding.version2.Group) obj;\r
- }\r
-\r
- /**\r
- * Method removeSetting.\r
- * \r
- * @param vSetting\r
- * @return true if the object was removed from the collection.\r
- */\r
- public boolean removeSetting(\r
- final jalview.schemabinding.version2.Setting vSetting)\r
- {\r
- boolean removed = _settingList.remove(vSetting);\r
- return removed;\r
- }\r
-\r
- /**\r
- * Method removeSettingAt.\r
- * \r
- * @param index\r
- * @return the element removed from the collection\r
- */\r
- public jalview.schemabinding.version2.Setting removeSettingAt(\r
- final int index)\r
- {\r
- java.lang.Object obj = this._settingList.remove(index);\r
- return (jalview.schemabinding.version2.Setting) obj;\r
- }\r
-\r
- /**\r
- * \r
- * \r
- * @param index\r
- * @param vGroup\r
- * @throws java.lang.IndexOutOfBoundsException\r
- * if the index given is outside the bounds of the collection\r
- */\r
- public void setGroup(final int index,\r
- final jalview.schemabinding.version2.Group vGroup)\r
- throws java.lang.IndexOutOfBoundsException\r
- {\r
- // check bounds for index\r
- if (index < 0 || index >= this._groupList.size())\r
- {\r
- throw new IndexOutOfBoundsException("setGroup: Index value '" + index\r
- + "' not in range [0.." + (this._groupList.size() - 1) + "]");\r
+\r
+ /**\r
+ * Method getSettingCount.\r
+ * \r
+ * @return the size of this collection\r
+ */\r
+ public int getSettingCount(\r
+ ) {\r
+ return this._settingList.size();\r
+ }\r
+\r
+ /**\r
+ * Method isValid.\r
+ * \r
+ * @return true if this object is valid according to the schema\r
+ */\r
+ public boolean isValid(\r
+ ) {\r
+ try {\r
+ validate();\r
+ } catch (org.exolab.castor.xml.ValidationException vex) {\r
+ return false;\r
+ }\r
+ return true;\r
+ }\r
+\r
+ /**\r
+ * \r
+ * \r
+ * @param out\r
+ * @throws org.exolab.castor.xml.MarshalException if object is\r
+ * null or if any SAXException is thrown during marshaling\r
+ * @throws org.exolab.castor.xml.ValidationException if this\r
+ * object is an invalid instance according to the schema\r
+ */\r
+ public void marshal(\r
+ final java.io.Writer out)\r
+ throws org.exolab.castor.xml.MarshalException, org.exolab.castor.xml.ValidationException {\r
+ Marshaller.marshal(this, out);\r
+ }\r
+\r
+ /**\r
+ * \r
+ * \r
+ * @param handler\r
+ * @throws java.io.IOException if an IOException occurs during\r
+ * marshaling\r
+ * @throws org.exolab.castor.xml.ValidationException if this\r
+ * object is an invalid instance according to the schema\r
+ * @throws org.exolab.castor.xml.MarshalException if object is\r
+ * null or if any SAXException is thrown during marshaling\r
+ */\r
+ public void marshal(\r
+ final org.xml.sax.ContentHandler handler)\r
+ throws java.io.IOException, org.exolab.castor.xml.MarshalException, org.exolab.castor.xml.ValidationException {\r
+ Marshaller.marshal(this, handler);\r
+ }\r
+\r
+ /**\r
+ */\r
+ public void removeAllGroup(\r
+ ) {\r
+ this._groupList.clear();\r
+ }\r
+\r
+ /**\r
+ */\r
+ public void removeAllSetting(\r
+ ) {\r
+ this._settingList.clear();\r
+ }\r
+\r
+ /**\r
+ * Method removeGroup.\r
+ * \r
+ * @param vGroup\r
+ * @return true if the object was removed from the collection.\r
+ */\r
+ public boolean removeGroup(\r
+ final jalview.schemabinding.version2.Group vGroup) {\r
+ boolean removed = _groupList.remove(vGroup);\r
+ return removed;\r
}\r
\r
- this._groupList.set(index, vGroup);\r
- }\r
-\r
- /**\r
- * \r
- * \r
- * @param vGroupArray\r
- */\r
- public void setGroup(\r
- final jalview.schemabinding.version2.Group[] vGroupArray)\r
- {\r
- // -- copy array\r
- _groupList.clear();\r
-\r
- for (int i = 0; i < vGroupArray.length; i++)\r
- {\r
- this._groupList.add(vGroupArray[i]);\r
+ /**\r
+ * Method removeGroupAt.\r
+ * \r
+ * @param index\r
+ * @return the element removed from the collection\r
+ */\r
+ public jalview.schemabinding.version2.Group removeGroupAt(\r
+ final int index) {\r
+ java.lang.Object obj = this._groupList.remove(index);\r
+ return (jalview.schemabinding.version2.Group) obj;\r
}\r
- }\r
-\r
- /**\r
- * \r
- * \r
- * @param index\r
- * @param vSetting\r
- * @throws java.lang.IndexOutOfBoundsException\r
- * if the index given is outside the bounds of the collection\r
- */\r
- public void setSetting(final int index,\r
- final jalview.schemabinding.version2.Setting vSetting)\r
- throws java.lang.IndexOutOfBoundsException\r
- {\r
- // check bounds for index\r
- if (index < 0 || index >= this._settingList.size())\r
- {\r
- throw new IndexOutOfBoundsException("setSetting: Index value '"\r
- + index + "' not in range [0.."\r
- + (this._settingList.size() - 1) + "]");\r
+\r
+ /**\r
+ * Method removeSetting.\r
+ * \r
+ * @param vSetting\r
+ * @return true if the object was removed from the collection.\r
+ */\r
+ public boolean removeSetting(\r
+ final jalview.schemabinding.version2.Setting vSetting) {\r
+ boolean removed = _settingList.remove(vSetting);\r
+ return removed;\r
+ }\r
+\r
+ /**\r
+ * Method removeSettingAt.\r
+ * \r
+ * @param index\r
+ * @return the element removed from the collection\r
+ */\r
+ public jalview.schemabinding.version2.Setting removeSettingAt(\r
+ final int index) {\r
+ java.lang.Object obj = this._settingList.remove(index);\r
+ return (jalview.schemabinding.version2.Setting) obj;\r
+ }\r
+\r
+ /**\r
+ * \r
+ * \r
+ * @param index\r
+ * @param vGroup\r
+ * @throws java.lang.IndexOutOfBoundsException if the index\r
+ * given is outside the bounds of the collection\r
+ */\r
+ public void setGroup(\r
+ final int index,\r
+ final jalview.schemabinding.version2.Group vGroup)\r
+ throws java.lang.IndexOutOfBoundsException {\r
+ // check bounds for index\r
+ if (index < 0 || index >= this._groupList.size()) {\r
+ throw new IndexOutOfBoundsException("setGroup: Index value '" + index + "' not in range [0.." + (this._groupList.size() - 1) + "]");\r
+ }\r
+ \r
+ this._groupList.set(index, vGroup);\r
+ }\r
+\r
+ /**\r
+ * \r
+ * \r
+ * @param vGroupArray\r
+ */\r
+ public void setGroup(\r
+ final jalview.schemabinding.version2.Group[] vGroupArray) {\r
+ //-- copy array\r
+ _groupList.clear();\r
+ \r
+ for (int i = 0; i < vGroupArray.length; i++) {\r
+ this._groupList.add(vGroupArray[i]);\r
+ }\r
+ }\r
+\r
+ /**\r
+ * \r
+ * \r
+ * @param index\r
+ * @param vSetting\r
+ * @throws java.lang.IndexOutOfBoundsException if the index\r
+ * given is outside the bounds of the collection\r
+ */\r
+ public void setSetting(\r
+ final int index,\r
+ final jalview.schemabinding.version2.Setting vSetting)\r
+ throws java.lang.IndexOutOfBoundsException {\r
+ // check bounds for index\r
+ if (index < 0 || index >= this._settingList.size()) {\r
+ throw new IndexOutOfBoundsException("setSetting: Index value '" + index + "' not in range [0.." + (this._settingList.size() - 1) + "]");\r
+ }\r
+ \r
+ this._settingList.set(index, vSetting);\r
+ }\r
+\r
+ /**\r
+ * \r
+ * \r
+ * @param vSettingArray\r
+ */\r
+ public void setSetting(\r
+ final jalview.schemabinding.version2.Setting[] vSettingArray) {\r
+ //-- copy array\r
+ _settingList.clear();\r
+ \r
+ for (int i = 0; i < vSettingArray.length; i++) {\r
+ this._settingList.add(vSettingArray[i]);\r
+ }\r
+ }\r
+\r
+ /**\r
+ * Method unmarshal.\r
+ * \r
+ * @param reader\r
+ * @throws org.exolab.castor.xml.MarshalException if object is\r
+ * null or if any SAXException is thrown during marshaling\r
+ * @throws org.exolab.castor.xml.ValidationException if this\r
+ * object is an invalid instance according to the schema\r
+ * @return the unmarshaled\r
+ * jalview.schemabinding.version2.FeatureSettings\r
+ */\r
+ public static jalview.schemabinding.version2.FeatureSettings unmarshal(\r
+ final java.io.Reader reader)\r
+ throws org.exolab.castor.xml.MarshalException, org.exolab.castor.xml.ValidationException {\r
+ return (jalview.schemabinding.version2.FeatureSettings) Unmarshaller.unmarshal(jalview.schemabinding.version2.FeatureSettings.class, reader);\r
}\r
\r
- this._settingList.set(index, vSetting);\r
- }\r
-\r
- /**\r
- * \r
- * \r
- * @param vSettingArray\r
- */\r
- public void setSetting(\r
- final jalview.schemabinding.version2.Setting[] vSettingArray)\r
- {\r
- // -- copy array\r
- _settingList.clear();\r
-\r
- for (int i = 0; i < vSettingArray.length; i++)\r
- {\r
- this._settingList.add(vSettingArray[i]);\r
+ /**\r
+ * \r
+ * \r
+ * @throws org.exolab.castor.xml.ValidationException if this\r
+ * object is an invalid instance according to the schema\r
+ */\r
+ public void validate(\r
+ )\r
+ throws org.exolab.castor.xml.ValidationException {\r
+ org.exolab.castor.xml.Validator validator = new org.exolab.castor.xml.Validator();\r
+ validator.validate(this);\r
}\r
- }\r
-\r
- /**\r
- * Method unmarshal.\r
- * \r
- * @param reader\r
- * @throws org.exolab.castor.xml.MarshalException\r
- * if object is null or if any SAXException is thrown during\r
- * marshaling\r
- * @throws org.exolab.castor.xml.ValidationException\r
- * if this object is an invalid instance according to the\r
- * schema\r
- * @return the unmarshaled jalview.schemabinding.version2.FeatureSettings\r
- */\r
- public static jalview.schemabinding.version2.FeatureSettings unmarshal(\r
- final java.io.Reader reader)\r
- throws org.exolab.castor.xml.MarshalException,\r
- org.exolab.castor.xml.ValidationException\r
- {\r
- return (jalview.schemabinding.version2.FeatureSettings) Unmarshaller\r
- .unmarshal(\r
- jalview.schemabinding.version2.FeatureSettings.class,\r
- reader);\r
- }\r
-\r
- /**\r
- * \r
- * \r
- * @throws org.exolab.castor.xml.ValidationException\r
- * if this object is an invalid instance according to the\r
- * schema\r
- */\r
- public void validate() throws org.exolab.castor.xml.ValidationException\r
- {\r
- org.exolab.castor.xml.Validator validator = new org.exolab.castor.xml.Validator();\r
- validator.validate(this);\r
- }\r
\r
}\r
git://source.jalview.org / jalview.git / blobdiff