/*\r
- * Jalview - A Sequence Alignment Editor and Viewer (Version 2.4)\r
- * Copyright (C) 2008 AM Waterhouse, J Procter, G Barton, M Clamp, S Searle\r
+ * Jalview - A Sequence Alignment Editor and Viewer (Version 2.4.1)\r
+ * Copyright (C) 2009 AM Waterhouse, J Procter, G Barton, M Clamp, S Searle\r
* \r
* This program is free software; you can redistribute it and/or\r
* modify it under the terms of the GNU General Public License\r
*/\r
package jalview.schemabinding.version2;\r
\r
-// ---------------------------------/\r
-// - Imported classes and packages -/\r
-// ---------------------------------/\r
+ //---------------------------------/\r
+ //- Imported classes and packages -/\r
+//---------------------------------/\r
\r
import org.exolab.castor.xml.Marshaller;\r
import org.exolab.castor.xml.Unmarshaller;\r
* \r
* @version $Revision$ $Date$\r
*/\r
-public class JalviewModel implements java.io.Serializable\r
-{\r
-\r
- // --------------------------/\r
- // - Class/Member Variables -/\r
- // --------------------------/\r
-\r
- /**\r
- * Field _creationDate.\r
- */\r
- private java.util.Date _creationDate;\r
-\r
- /**\r
- * Field _version.\r
- */\r
- private java.lang.String _version;\r
-\r
- /**\r
- * Field _vamsasModel.\r
- */\r
- private jalview.schemabinding.version2.VamsasModel _vamsasModel;\r
-\r
- /**\r
- * Field _jalviewModelSequence.\r
- */\r
- private jalview.schemabinding.version2.JalviewModelSequence _jalviewModelSequence;\r
-\r
- // ----------------/\r
- // - Constructors -/\r
- // ----------------/\r
-\r
- public JalviewModel()\r
- {\r
- super();\r
- }\r
-\r
- // -----------/\r
- // - Methods -/\r
- // -----------/\r
-\r
- /**\r
- * Returns the value of field 'creationDate'.\r
- * \r
- * @return the value of field 'CreationDate'.\r
- */\r
- public java.util.Date getCreationDate()\r
- {\r
- return this._creationDate;\r
- }\r
-\r
- /**\r
- * Returns the value of field 'jalviewModelSequence'.\r
- * \r
- * @return the value of field 'JalviewModelSequence'.\r
- */\r
- public jalview.schemabinding.version2.JalviewModelSequence getJalviewModelSequence()\r
- {\r
- return this._jalviewModelSequence;\r
- }\r
-\r
- /**\r
- * Returns the value of field 'vamsasModel'.\r
- * \r
- * @return the value of field 'VamsasModel'.\r
- */\r
- public jalview.schemabinding.version2.VamsasModel getVamsasModel()\r
- {\r
- return this._vamsasModel;\r
- }\r
-\r
- /**\r
- * Returns the value of field 'version'.\r
- * \r
- * @return the value of field 'Version'.\r
- */\r
- public java.lang.String getVersion()\r
- {\r
- return this._version;\r
- }\r
-\r
- /**\r
- * Method isValid.\r
- * \r
- * @return true if this object is valid according to the schema\r
- */\r
- public boolean isValid()\r
- {\r
- try\r
- {\r
- validate();\r
- } catch (org.exolab.castor.xml.ValidationException vex)\r
- {\r
- return false;\r
+public class JalviewModel implements java.io.Serializable {\r
+\r
+\r
+ //--------------------------/\r
+ //- Class/Member Variables -/\r
+ //--------------------------/\r
+\r
+ /**\r
+ * Field _creationDate.\r
+ */\r
+ private java.util.Date _creationDate;\r
+\r
+ /**\r
+ * Field _version.\r
+ */\r
+ private java.lang.String _version;\r
+\r
+ /**\r
+ * Field _vamsasModel.\r
+ */\r
+ private jalview.schemabinding.version2.VamsasModel _vamsasModel;\r
+\r
+ /**\r
+ * Field _jalviewModelSequence.\r
+ */\r
+ private jalview.schemabinding.version2.JalviewModelSequence _jalviewModelSequence;\r
+\r
+\r
+ //----------------/\r
+ //- Constructors -/\r
+ //----------------/\r
+\r
+ public JalviewModel() {\r
+ super();\r
+ }\r
+\r
+\r
+ //-----------/\r
+ //- Methods -/\r
+ //-----------/\r
+\r
+ /**\r
+ * Returns the value of field 'creationDate'.\r
+ * \r
+ * @return the value of field 'CreationDate'.\r
+ */\r
+ public java.util.Date getCreationDate(\r
+ ) {\r
+ return this._creationDate;\r
+ }\r
+\r
+ /**\r
+ * Returns the value of field 'jalviewModelSequence'.\r
+ * \r
+ * @return the value of field 'JalviewModelSequence'.\r
+ */\r
+ public jalview.schemabinding.version2.JalviewModelSequence getJalviewModelSequence(\r
+ ) {\r
+ return this._jalviewModelSequence;\r
+ }\r
+\r
+ /**\r
+ * Returns the value of field 'vamsasModel'.\r
+ * \r
+ * @return the value of field 'VamsasModel'.\r
+ */\r
+ public jalview.schemabinding.version2.VamsasModel getVamsasModel(\r
+ ) {\r
+ return this._vamsasModel;\r
+ }\r
+\r
+ /**\r
+ * Returns the value of field 'version'.\r
+ * \r
+ * @return the value of field 'Version'.\r
+ */\r
+ public java.lang.String getVersion(\r
+ ) {\r
+ return this._version;\r
+ }\r
+\r
+ /**\r
+ * Method isValid.\r
+ * \r
+ * @return true if this object is valid according to the schema\r
+ */\r
+ public boolean isValid(\r
+ ) {\r
+ try {\r
+ validate();\r
+ } catch (org.exolab.castor.xml.ValidationException vex) {\r
+ return false;\r
+ }\r
+ return true;\r
+ }\r
+\r
+ /**\r
+ * \r
+ * \r
+ * @param out\r
+ * @throws org.exolab.castor.xml.MarshalException if object is\r
+ * null or if any SAXException is thrown during marshaling\r
+ * @throws org.exolab.castor.xml.ValidationException if this\r
+ * object is an invalid instance according to the schema\r
+ */\r
+ public void marshal(\r
+ final java.io.Writer out)\r
+ throws org.exolab.castor.xml.MarshalException, org.exolab.castor.xml.ValidationException {\r
+ Marshaller.marshal(this, out);\r
+ }\r
+\r
+ /**\r
+ * \r
+ * \r
+ * @param handler\r
+ * @throws java.io.IOException if an IOException occurs during\r
+ * marshaling\r
+ * @throws org.exolab.castor.xml.ValidationException if this\r
+ * object is an invalid instance according to the schema\r
+ * @throws org.exolab.castor.xml.MarshalException if object is\r
+ * null or if any SAXException is thrown during marshaling\r
+ */\r
+ public void marshal(\r
+ final org.xml.sax.ContentHandler handler)\r
+ throws java.io.IOException, org.exolab.castor.xml.MarshalException, org.exolab.castor.xml.ValidationException {\r
+ Marshaller.marshal(this, handler);\r
+ }\r
+\r
+ /**\r
+ * Sets the value of field 'creationDate'.\r
+ * \r
+ * @param creationDate the value of field 'creationDate'.\r
+ */\r
+ public void setCreationDate(\r
+ final java.util.Date creationDate) {\r
+ this._creationDate = creationDate;\r
+ }\r
+\r
+ /**\r
+ * Sets the value of field 'jalviewModelSequence'.\r
+ * \r
+ * @param jalviewModelSequence the value of field\r
+ * 'jalviewModelSequence'.\r
+ */\r
+ public void setJalviewModelSequence(\r
+ final jalview.schemabinding.version2.JalviewModelSequence jalviewModelSequence) {\r
+ this._jalviewModelSequence = jalviewModelSequence;\r
+ }\r
+\r
+ /**\r
+ * Sets the value of field 'vamsasModel'.\r
+ * \r
+ * @param vamsasModel the value of field 'vamsasModel'.\r
+ */\r
+ public void setVamsasModel(\r
+ final jalview.schemabinding.version2.VamsasModel vamsasModel) {\r
+ this._vamsasModel = vamsasModel;\r
+ }\r
+\r
+ /**\r
+ * Sets the value of field 'version'.\r
+ * \r
+ * @param version the value of field 'version'.\r
+ */\r
+ public void setVersion(\r
+ final java.lang.String version) {\r
+ this._version = version;\r
+ }\r
+\r
+ /**\r
+ * Method unmarshal.\r
+ * \r
+ * @param reader\r
+ * @throws org.exolab.castor.xml.MarshalException if object is\r
+ * null or if any SAXException is thrown during marshaling\r
+ * @throws org.exolab.castor.xml.ValidationException if this\r
+ * object is an invalid instance according to the schema\r
+ * @return the unmarshaled\r
+ * jalview.schemabinding.version2.JalviewModel\r
+ */\r
+ public static jalview.schemabinding.version2.JalviewModel unmarshal(\r
+ final java.io.Reader reader)\r
+ throws org.exolab.castor.xml.MarshalException, org.exolab.castor.xml.ValidationException {\r
+ return (jalview.schemabinding.version2.JalviewModel) Unmarshaller.unmarshal(jalview.schemabinding.version2.JalviewModel.class, reader);\r
+ }\r
+\r
+ /**\r
+ * \r
+ * \r
+ * @throws org.exolab.castor.xml.ValidationException if this\r
+ * object is an invalid instance according to the schema\r
+ */\r
+ public void validate(\r
+ )\r
+ throws org.exolab.castor.xml.ValidationException {\r
+ org.exolab.castor.xml.Validator validator = new org.exolab.castor.xml.Validator();\r
+ validator.validate(this);\r
}\r
- return true;\r
- }\r
-\r
- /**\r
- * \r
- * \r
- * @param out\r
- * @throws org.exolab.castor.xml.MarshalException\r
- * if object is null or if any SAXException is thrown during\r
- * marshaling\r
- * @throws org.exolab.castor.xml.ValidationException\r
- * if this object is an invalid instance according to the\r
- * schema\r
- */\r
- public void marshal(final java.io.Writer out)\r
- throws org.exolab.castor.xml.MarshalException,\r
- org.exolab.castor.xml.ValidationException\r
- {\r
- Marshaller.marshal(this, out);\r
- }\r
-\r
- /**\r
- * \r
- * \r
- * @param handler\r
- * @throws java.io.IOException\r
- * if an IOException occurs during marshaling\r
- * @throws org.exolab.castor.xml.ValidationException\r
- * if this object is an invalid instance according to the\r
- * schema\r
- * @throws org.exolab.castor.xml.MarshalException\r
- * if object is null or if any SAXException is thrown during\r
- * marshaling\r
- */\r
- public void marshal(final org.xml.sax.ContentHandler handler)\r
- throws java.io.IOException,\r
- org.exolab.castor.xml.MarshalException,\r
- org.exolab.castor.xml.ValidationException\r
- {\r
- Marshaller.marshal(this, handler);\r
- }\r
-\r
- /**\r
- * Sets the value of field 'creationDate'.\r
- * \r
- * @param creationDate\r
- * the value of field 'creationDate'.\r
- */\r
- public void setCreationDate(final java.util.Date creationDate)\r
- {\r
- this._creationDate = creationDate;\r
- }\r
-\r
- /**\r
- * Sets the value of field 'jalviewModelSequence'.\r
- * \r
- * @param jalviewModelSequence\r
- * the value of field 'jalviewModelSequence'.\r
- */\r
- public void setJalviewModelSequence(\r
- final jalview.schemabinding.version2.JalviewModelSequence jalviewModelSequence)\r
- {\r
- this._jalviewModelSequence = jalviewModelSequence;\r
- }\r
-\r
- /**\r
- * Sets the value of field 'vamsasModel'.\r
- * \r
- * @param vamsasModel\r
- * the value of field 'vamsasModel'.\r
- */\r
- public void setVamsasModel(\r
- final jalview.schemabinding.version2.VamsasModel vamsasModel)\r
- {\r
- this._vamsasModel = vamsasModel;\r
- }\r
-\r
- /**\r
- * Sets the value of field 'version'.\r
- * \r
- * @param version\r
- * the value of field 'version'.\r
- */\r
- public void setVersion(final java.lang.String version)\r
- {\r
- this._version = version;\r
- }\r
-\r
- /**\r
- * Method unmarshal.\r
- * \r
- * @param reader\r
- * @throws org.exolab.castor.xml.MarshalException\r
- * if object is null or if any SAXException is thrown during\r
- * marshaling\r
- * @throws org.exolab.castor.xml.ValidationException\r
- * if this object is an invalid instance according to the\r
- * schema\r
- * @return the unmarshaled jalview.schemabinding.version2.JalviewModel\r
- */\r
- public static jalview.schemabinding.version2.JalviewModel unmarshal(\r
- final java.io.Reader reader)\r
- throws org.exolab.castor.xml.MarshalException,\r
- org.exolab.castor.xml.ValidationException\r
- {\r
- return (jalview.schemabinding.version2.JalviewModel) Unmarshaller\r
- .unmarshal(jalview.schemabinding.version2.JalviewModel.class,\r
- reader);\r
- }\r
-\r
- /**\r
- * \r
- * \r
- * @throws org.exolab.castor.xml.ValidationException\r
- * if this object is an invalid instance according to the\r
- * schema\r
- */\r
- public void validate() throws org.exolab.castor.xml.ValidationException\r
- {\r
- org.exolab.castor.xml.Validator validator = new org.exolab.castor.xml.Validator();\r
- validator.validate(this);\r
- }\r
\r
}\r
git://source.jalview.org / jalview.git / blobdiff