JAL-1620 version bump and release notes

[jalview.git] / src / jalview / ws / jws1 / Discoverer.java

diff --git a/src/jalview/ws/jws1/Discoverer.java b/src/jalview/ws/jws1/Discoverer.java
index cdd9247..7cb0481 100644 (file)
--- a/src/jalview/ws/jws1/Discoverer.java
+++ b/src/jalview/ws/jws1/Discoverer.java
@@ -1,23 +1,27 @@
 /*
- * Jalview - A Sequence Alignment Editor and Viewer (Version 2.8.2)
+ * Jalview - A Sequence Alignment Editor and Viewer (Version 2.8.2b1)
  * Copyright (C) 2014 The Jalview Authors
  * 
  * This file is part of Jalview.
  * 
  * Jalview is free software: you can redistribute it and/or
  * modify it under the terms of the GNU General Public License 
- * as published by the Free Software Foundation, either version 3 of the License, or (at your option) any later version.
+ * as published by the Free Software Foundation, either version 3
+ * of the License, or (at your option) any later version.
  *  
  * Jalview is distributed in the hope that it will be useful, but 
  * WITHOUT ANY WARRANTY; without even the implied warranty 
  * of MERCHANTABILITY or FITNESS FOR A PARTICULAR 
  * PURPOSE.  See the GNU General Public License for more details.
  * 
- * You should have received a copy of the GNU General Public License along with Jalview.  If not, see <http://www.gnu.org/licenses/>.
+ * You should have received a copy of the GNU General Public License
+ * along with Jalview.  If not, see <http://www.gnu.org/licenses/>.
  * The Jalview Authors are detailed in the 'AUTHORS' file.
  */
 package jalview.ws.jws1;
 
+import jalview.util.MessageManager;
+
 import java.util.*;
 
 import javax.swing.*;
@@ -190,21 +194,21 @@ public class Discoverer implements Runnable
                     "Edgar, Robert C. (2004), MUSCLE: multiple sequence alignment "
                             + "with high accuracy and high throughput, Nucleic Acids Research 32(5), 1792-97.",
                     "http://www.compbio.dundee.ac.uk/JalviewWS/services/MuscleWS",
-                    "Muscle Multiple Protein Sequence Alignment"),
+                    MessageManager.getString("label.muscle_multiple_protein_sequence_alignment")),
             new ServiceHandle(
                     "MsaWS",
                     "Katoh, K., K. Kuma, K., Toh, H.,  and Miyata, T. (2005) "
                             + "\"MAFFT version 5: improvement in accuracy of multiple sequence alignment.\""
                             + " Nucleic Acids Research, 33 511-518",
                     "http://www.compbio.dundee.ac.uk/JalviewWS/services/MafftWS",
-                    "MAFFT Multiple Sequence Alignment"),
+                    MessageManager.getString("label.mafft_multiple_sequence_alignment")),
             new ServiceHandle(
                     "MsaWS",
                     "Thompson, J.D., Higgins, D.G. and Gibson, T.J. (1994) CLUSTAL W: improving the sensitivity of progressive multiple"
                             + " sequence alignment through sequence weighting, position specific gap penalties and weight matrix choice."
                             + " Nucleic Acids Research, 22 4673-4680",
                     "http://www.compbio.dundee.ac.uk/JalviewWS/services/ClustalWS",
-                    "ClustalW Multiple Sequence Alignment"),
+                    MessageManager.getString("label.clustalw_multiple_sequence_alignment")),
             new ServiceHandle(
                     "SecStrPred",
                     "Cole C., Barber J. D., Barton G.J (2008) "
@@ -246,8 +250,8 @@ public class Discoverer implements Runnable
           JOptionPane
                   .showMessageDialog(
                           jalview.gui.Desktop.desktop,
-                          "Please set up your proxy settings in the 'Connections' tab of the Preferences window",
-                          "Proxy Authorization Failed",
+                          MessageManager.getString("label.set_proxy_settings"),
+                          MessageManager.getString("label.proxy_authorization_failed"),
                           JOptionPane.WARNING_MESSAGE);
         }
       }