-/**
- * SequenceSet.java
- *
- * This file was auto-generated from WSDL
- * by the Apache Axis 1.2RC2 Nov 16, 2004 (12:19:44 EST) WSDL2Java emitter.
- */
-
/*
-* Jalview - A Sequence Alignment Editor and Viewer
-* Copyright (C) 2005 AM Waterhouse, J Procter, G Barton, M Clamp, S Searle
-*
-* This program is free software; you can redistribute it and/or
-* modify it under the terms of the GNU General Public License
-* as published by the Free Software Foundation; either version 2
-* of the License, or (at your option) any later version.
-*
-* This program is distributed in the hope that it will be useful,
-* but WITHOUT ANY WARRANTY; without even the implied warranty of
-* MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
-* GNU General Public License for more details.
-*
-* You should have received a copy of the GNU General Public License
-* along with this program; if not, write to the Free Software
-* Foundation, Inc., 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301, USA
-*/
-
+ * Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$)
+ * Copyright (C) $$Year-Rel$$ The Jalview Authors
+ *
+ * This file is part of Jalview.
+ *
+ * Jalview is free software: you can redistribute it and/or
+ * modify it under the terms of the GNU General Public License
+ * as published by the Free Software Foundation, either version 3
+ * of the License, or (at your option) any later version.
+ *
+ * Jalview is distributed in the hope that it will be useful, but
+ * WITHOUT ANY WARRANTY; without even the implied warranty
+ * of MERCHANTABILITY or FITNESS FOR A PARTICULAR
+ * PURPOSE. See the GNU General Public License for more details.
+ *
+ * You should have received a copy of the GNU General Public License
+ * along with Jalview. If not, see <http://www.gnu.org/licenses/>.
+ * The Jalview Authors are detailed in the 'AUTHORS' file.
+ */
package vamsas.objects.simple;
-public class SequenceSet implements java.io.Serializable {
- private vamsas.objects.simple.Sequence[] seqs;
+public class SequenceSet implements java.io.Serializable
+{
+ private vamsas.objects.simple.Sequence[] seqs;
- public SequenceSet() {
- }
+ public SequenceSet()
+ {
+ }
- public SequenceSet(
- vamsas.objects.simple.Sequence[] seqs) {
- this.seqs = seqs;
- }
+ public SequenceSet(vamsas.objects.simple.Sequence[] seqs)
+ {
+ this.seqs = seqs;
+ }
+ /**
+ * Gets the seqs value for this SequenceSet.
+ *
+ * @return seqs
+ */
+ public vamsas.objects.simple.Sequence[] getSeqs()
+ {
+ return seqs;
+ }
- /**
- * Gets the seqs value for this SequenceSet.
- *
- * @return seqs
- */
- public vamsas.objects.simple.Sequence[] getSeqs() {
- return seqs;
- }
+ /**
+ * Sets the seqs value for this SequenceSet.
+ *
+ * @param seqs
+ */
+ public void setSeqs(vamsas.objects.simple.Sequence[] seqs)
+ {
+ this.seqs = seqs;
+ }
+ private java.lang.Object __equalsCalc = null;
- /**
- * Sets the seqs value for this SequenceSet.
- *
- * @param seqs
- */
- public void setSeqs(vamsas.objects.simple.Sequence[] seqs) {
- this.seqs = seqs;
+ @Override
+ public synchronized boolean equals(java.lang.Object obj)
+ {
+ if (obj == null)
+ {
+ return false;
}
-
- private java.lang.Object __equalsCalc = null;
- public synchronized boolean equals(java.lang.Object obj) {
- if (!(obj instanceof SequenceSet)) return false;
- SequenceSet other = (SequenceSet) obj;
- if (obj == null) return false;
- if (this == obj) return true;
- if (__equalsCalc != null) {
- return (__equalsCalc == obj);
- }
- __equalsCalc = obj;
- boolean _equals;
- _equals = true &&
- ((this.seqs==null && other.getSeqs()==null) ||
- (this.seqs!=null &&
- java.util.Arrays.equals(this.seqs, other.getSeqs())));
- __equalsCalc = null;
- return _equals;
+ if (!(obj instanceof SequenceSet))
+ {
+ return false;
+ }
+ SequenceSet other = (SequenceSet) obj;
+ if (this == obj)
+ {
+ return true;
+ }
+ if (__equalsCalc != null)
+ {
+ return (__equalsCalc == obj);
}
+ __equalsCalc = obj;
+ boolean _equals;
+ _equals = true && ((this.seqs == null && other.getSeqs() == null)
+ || (this.seqs != null && java.util.Arrays.equals(this.seqs,
+ other.getSeqs())));
+ __equalsCalc = null;
+ return _equals;
+ }
- private boolean __hashCodeCalc = false;
- public synchronized int hashCode() {
- if (__hashCodeCalc) {
- return 0;
- }
- __hashCodeCalc = true;
- int _hashCode = 1;
- if (getSeqs() != null) {
- for (int i=0;
- i<java.lang.reflect.Array.getLength(getSeqs());
- i++) {
- java.lang.Object obj = java.lang.reflect.Array.get(getSeqs(), i);
- if (obj != null &&
- !obj.getClass().isArray()) {
- _hashCode += obj.hashCode();
- }
- }
+ private boolean __hashCodeCalc = false;
+
+ @Override
+ public synchronized int hashCode()
+ {
+ if (__hashCodeCalc)
+ {
+ return 0;
+ }
+ __hashCodeCalc = true;
+ int _hashCode = 1;
+ if (getSeqs() != null)
+ {
+ for (int i = 0; i < java.lang.reflect.Array.getLength(getSeqs()); i++)
+ {
+ java.lang.Object obj = java.lang.reflect.Array.get(getSeqs(), i);
+ if (obj != null && !obj.getClass().isArray())
+ {
+ _hashCode += obj.hashCode();
}
- __hashCodeCalc = false;
- return _hashCode;
+ }
}
+ __hashCodeCalc = false;
+ return _hashCode;
+ }
}
git://source.jalview.org / jalview.git / blobdiff