rc.add('-');
rc.add('.');
rc.add(' ');
-
+
assertEquals(rc.getGapCount(), 4);
assertEquals(rc.getCount(' '), 4);
assertEquals(rc.getCount('-'), 4);
assertEquals(rc.getCount('.'), 4);
assertFalse(rc.isUsingOtherData());
assertFalse(rc.isCountingInts());
-
- rc.set(ResidueCount.GAP_COUNT, Short.MAX_VALUE-2);
- assertEquals(rc.getGapCount(), Short.MAX_VALUE-2);
+
+ rc.set(ResidueCount.GAP_COUNT, Short.MAX_VALUE - 2);
+ assertEquals(rc.getGapCount(), Short.MAX_VALUE - 2);
assertFalse(rc.isCountingInts());
rc.addGap();
- assertEquals(rc.getGapCount(), Short.MAX_VALUE-1);
+ assertEquals(rc.getGapCount(), Short.MAX_VALUE - 1);
assertFalse(rc.isCountingInts());
rc.addGap();
assertEquals(rc.getGapCount(), Short.MAX_VALUE);
rc.addGap();
assertTrue(rc.isCountingInts());
- assertEquals(rc.getGapCount(), Short.MAX_VALUE+1);
+ assertEquals(rc.getGapCount(), Short.MAX_VALUE + 1);
}
@Test(groups = "Functional")
rc.add('P');
assertEquals(rc.getResiduesForCount(Short.MAX_VALUE + 1), "P");
assertEquals(rc.getResiduesForCount(1), "C");
-
+
// modal count is in the 'other data' counts
rc = new ResidueCount();
rc.add('Q');
rc.add('K');
}
rc.add('F');
-
+
/*
* percentages are rounded (0.5 rounded up)
* 10/40 9/40 7/40 6/40 1/40