JAL-3438 spotless for 2.11.2.0
[jalview.git] / test / jalview / ext / ensembl / EnsemblGenomeTest.java
index 11140f9..0652dd6 100644 (file)
@@ -75,8 +75,8 @@ public class EnsemblGenomeTest
     String transcriptId = "ABC123";
 
     // transcript at (start+10000) length 501
-    SequenceFeature sf = new SequenceFeature("transcript", "", 20000,
-            20500, 0f, null);
+    SequenceFeature sf = new SequenceFeature("transcript", "", 20000, 20500,
+            0f, null);
     sf.setValue("id", transcriptId);
     sf.setStrand("+");
     genomic.addSequenceFeature(sf);
@@ -89,8 +89,8 @@ public class EnsemblGenomeTest
 
     // Ensembl treats NMD_transcript_variant as if transcript
     // although strictly it is a sequence_variant in SO
-    sf = new SequenceFeature("NMD_transcript_variant", "", 11000, 12000,
-            0f, null);
+    sf = new SequenceFeature("NMD_transcript_variant", "", 11000, 12000, 0f,
+            null);
     sf.setValue("id", transcriptId);
     sf.setStrand("+");
     genomic.addSequenceFeature(sf);
@@ -133,16 +133,16 @@ public class EnsemblGenomeTest
     String accId = "ABC123";
     EnsemblGenome testee = new EnsemblGenome();
 
-    SequenceFeature sf = new SequenceFeature("transcript", "", 20000,
-            20500, 0f, null);
+    SequenceFeature sf = new SequenceFeature("transcript", "", 20000, 20500,
+            0f, null);
     assertFalse(testee.retainFeature(sf, accId));
 
     sf = new SequenceFeature("mature_transcript", "", 20000, 20500, 0f,
             null);
     assertFalse(testee.retainFeature(sf, accId));
 
-    sf = new SequenceFeature("NMD_transcript_variant", "", 20000, 20500,
-            0f, null);
+    sf = new SequenceFeature("NMD_transcript_variant", "", 20000, 20500, 0f,
+            null);
     assertFalse(testee.retainFeature(sf, accId));
 
     // other feature with no parent is kept