JAL-1620 version bump and release notes

[jalview.git] / test / jalview / ws / jabaws / DisorderAnnotExportImport.java

diff --git a/test/jalview/ws/jabaws/DisorderAnnotExportImport.java b/test/jalview/ws/jabaws/DisorderAnnotExportImport.java
index bd743e0..d488b44 100644 (file)
--- a/test/jalview/ws/jabaws/DisorderAnnotExportImport.java
+++ b/test/jalview/ws/jabaws/DisorderAnnotExportImport.java
@@ -1,19 +1,21 @@
 /*
- * Jalview - A Sequence Alignment Editor and Viewer (Version 2.8.0b1)
+ * Jalview - A Sequence Alignment Editor and Viewer (Version 2.8.2b1)
  * Copyright (C) 2014 The Jalview Authors
  * 
  * This file is part of Jalview.
  * 
  * Jalview is free software: you can redistribute it and/or
  * modify it under the terms of the GNU General Public License 
- * as published by the Free Software Foundation, either version 3 of the License, or (at your option) any later version.
+ * as published by the Free Software Foundation, either version 3
+ * of the License, or (at your option) any later version.
  *  
  * Jalview is distributed in the hope that it will be useful, but 
  * WITHOUT ANY WARRANTY; without even the implied warranty 
  * of MERCHANTABILITY or FITNESS FOR A PARTICULAR 
  * PURPOSE.  See the GNU General Public License for more details.
  * 
- * You should have received a copy of the GNU General Public License along with Jalview.  If not, see <http://www.gnu.org/licenses/>.
+ * You should have received a copy of the GNU General Public License
+ * along with Jalview.  If not, see <http://www.gnu.org/licenses/>.
  * The Jalview Authors are detailed in the 'AUTHORS' file.
  */
 package jalview.ws.jabaws;
@@ -98,16 +100,17 @@ public class DisorderAnnotExportImport
       ;
     } while (af.getViewport().getCalcManager().isWorking());
     AlignmentI orig_alig = af.getViewport().getAlignment();
-    // NOTE: Consensus annotation row cannot be exported and reimported faithfully - so we remove them
+    // NOTE: Consensus annotation row cannot be exported and reimported
+    // faithfully - so we remove them
     List<AlignmentAnnotation> toremove = new ArrayList<AlignmentAnnotation>();
-    for (AlignmentAnnotation aa:orig_alig.getAlignmentAnnotation())
+    for (AlignmentAnnotation aa : orig_alig.getAlignmentAnnotation())
     {
       if (aa.autoCalculated)
       {
         toremove.add(aa);
       }
     }
-    for (AlignmentAnnotation aa:toremove)
+    for (AlignmentAnnotation aa : toremove)
     {
       orig_alig.deleteAnnotation(aa);
     }