JAL-4090 JAL-629 FER1+SPIOL -> FER1_SPIOL in command line example
authorJames Procter <j.procter@dundee.ac.uk>
Fri, 29 Sep 2023 16:59:02 +0000 (17:59 +0100)
committerJames Procter <j.procter@dundee.ac.uk>
Fri, 29 Sep 2023 16:59:02 +0000 (17:59 +0100)
help/help/html/features/clarguments-basic.html

index c82cb20..238366c 100644 (file)
   <br/>
   The value can also be specified as a sub-value:
   <pre>
-  jalview --open examples/uniref50.fa --structure [seqid=FER1+SPIOL,structureviewer=jmol,tempfac=plddt]examples/AlphaFold/AF-P00221-F1-model_v4.pdb
+  jalview --open examples/uniref50.fa --structure [seqid=FER1_SPIOL,structureviewer=jmol,tempfac=plddt]examples/AlphaFold/AF-P00221-F1-model_v4.pdb
   </pre>
   which is equivalent to
   <pre>
-  jalview --open examples/uniref50.fa --structure examples/AlphaFold/AF-P00221-F1-model_v4.pdb --tempfac plddt --seqid FER1+SPIOL
+  jalview --open examples/uniref50.fa --structure examples/AlphaFold/AF-P00221-F1-model_v4.pdb --tempfac plddt --seqid FER1_SPIOL
    --structureviewer jmol
   </pre>