removed duplicate descriptions, documented nodisplay further.

diff --git a/help/html/features/clarguments.html b/help/html/features/clarguments.html
index 2a6da61..b27b6aa 100644 (file)
--- a/help/html/features/clarguments.html
+++ b/help/html/features/clarguments.html
@@ -9,7 +9,7 @@
  <table width="100%" border="1" cellspacing="0" cellpadding="0">
  <tr > 
  <td width="27%"><div align="center">-nodisplay</div></td>
- <td width="73%"><div align="left">Run Jalview without User Interface.</div></td>
+ <td width="73%"><div align="left">Run Jalview without User Interface. (automatically disables questionnaire, version and usage stats checks)</div></td>
  </tr>
 
  <tr> 
@@ -43,21 +43,6 @@
        </tr>
        <tr>
                <td>
-               <div align="center">-nodisplay</div>
-               <td>
-               <div align="left">Run Jalview without User Interface</div>
-               </td>
-       </tr>
-       <tr>
-               <td>
-               <div align="center">-props FILE</div>
-               <td>
-               <div align="left">Use the given Jalview properties file instead
-               of users default</div>
-               </td>
-       </tr>
-       <tr>
-               <td>
                <div align="center">-tree FILE</div>
                <td>
                <div align="left">Load the given newick format tree file onto
@@ -66,14 +51,6 @@
        </tr>
        <tr>
                <td>
-               <div align="center">-features FILE</div>
-               <td>
-               <div align="left">Use the given file to mark features on the
-               alignment</div>
-               </td>
-       </tr>
-       <tr>
-               <td>
                <div align="center">-questionnaire URL</div>
                <td>
                <div align="left">Queries the given URL for information about