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JAL-1705 test updated for canonicalised UNIPROT sequence name
authorgmungoc <g.m.carstairs@dundee.ac.uk>
Fri, 1 Apr 2016 10:42:08 +0000 (11:42 +0100)
committergmungoc <g.m.carstairs@dundee.ac.uk>
Fri, 1 Apr 2016 10:42:08 +0000 (11:42 +0100)
test/jalview/ws/dbsources/UniprotTest.java patch | blob | history

diff --git a/test/jalview/ws/dbsources/UniprotTest.java b/test/jalview/ws/dbsources/UniprotTest.java
index ed3ac77..72e599d 100644 (file)
--- a/test/jalview/ws/dbsources/UniprotTest.java
+++ b/test/jalview/ws/dbsources/UniprotTest.java
@@ -135,8 +135,9 @@ public class UniprotTest
 
     /*
      * name formatted as source | accession ids | names
+     * source database converted to Jalview canonical name
      */
-    String expectedName = "UniProt/Swiss-Prot|A9CKP4|A9CKP5|A9CKP4_AGRT5|A9CKP4_AGRT6";
+    String expectedName = "UNIPROT|A9CKP4|A9CKP5|A9CKP4_AGRT5|A9CKP4_AGRT6";
     assertEquals(expectedName, Uniprot.getUniprotEntryId(entry));
   }