JAL-1807 explicit imports (jalview.controller)
authorgmungoc <g.m.carstairs@dundee.ac.uk>
Fri, 10 Jul 2015 05:13:17 +0000 (06:13 +0100)
committergmungoc <g.m.carstairs@dundee.ac.uk>
Fri, 10 Jul 2015 05:13:17 +0000 (06:13 +0100)
src/jalview/controller/AlignViewController.java

index 3be32bb..3c76617 100644 (file)
@@ -21,6 +21,7 @@
 package jalview.controller;
 
 import jalview.analysis.AlignmentSorter;
+import jalview.analysis.Grouping;
 import jalview.api.AlignViewControllerGuiI;
 import jalview.api.AlignViewControllerI;
 import jalview.api.AlignViewportI;
@@ -86,14 +87,14 @@ public class AlignViewController implements AlignViewControllerI
     if (sg != null
             && (cs == null || cs.getSelected() == null || cs.size() == 0))
     {
-      gps = jalview.analysis.Grouping.makeGroupsFrom(
+      gps = Grouping.makeGroupsFrom(
               viewport.getSequenceSelection(),
               viewport.getAlignmentView(true).getSequenceStrings(
                       viewport.getGapCharacter()), viewport.getAlignment()
                       .getGroups());
     } else {
       if (cs!=null) {
-        gps = jalview.analysis.Grouping.makeGroupsFromCols(
+        gps = Grouping.makeGroupsFromCols(
                 (sg == null) ? viewport.getAlignment().getSequencesArray()
                         : sg.getSequences().toArray(new SequenceI[0]), cs,
                 viewport.getAlignment().getGroups());