JAL-2738 code formatting
authorgmungoc <g.m.carstairs@dundee.ac.uk>
Tue, 3 Oct 2017 10:21:11 +0000 (11:21 +0100)
committergmungoc <g.m.carstairs@dundee.ac.uk>
Tue, 3 Oct 2017 10:21:11 +0000 (11:21 +0100)
src/jalview/io/vcf/VCFLoader.java

index 8dab1d6..9099fcd 100644 (file)
@@ -668,8 +668,7 @@ public class VCFLoader
    * @param sf
    * @param altAlelleIndex
    */
-  protected void addAlleleProperties(VariantContext variant,
- SequenceI seq,
+  protected void addAlleleProperties(VariantContext variant, SequenceI seq,
           SequenceFeature sf, final int altAlelleIndex)
   {
     Map<String, Object> atts = variant.getAttributes();
@@ -753,8 +752,7 @@ public class VCFLoader
    *          (1=first alternative allele...)
    */
   protected void addConsequences(Object value, SequenceI seq,
-          SequenceFeature sf,
-          int altAlelleIndex)
+          SequenceFeature sf, int altAlelleIndex)
   {
     if (!(value instanceof ArrayList<?>))
     {