git://source.jalview.org / jalview.git / commitdiff
? search:
summary | shortlog | log | commit | commitdiff | tree
raw | patch | inline | side by side (parent: 1488d22)
JAL-2110 defensive check in code
authorgmungoc <g.m.carstairs@dundee.ac.uk>
Mon, 4 Jul 2016 14:19:43 +0000 (15:19 +0100)
committergmungoc <g.m.carstairs@dundee.ac.uk>
Mon, 4 Jul 2016 14:19:43 +0000 (15:19 +0100)
src/jalview/datamodel/AlignedCodonFrame.java patch | blob | history

diff --git a/src/jalview/datamodel/AlignedCodonFrame.java b/src/jalview/datamodel/AlignedCodonFrame.java
index 18aaecf..bb705b6 100644 (file)
--- a/src/jalview/datamodel/AlignedCodonFrame.java
+++ b/src/jalview/datamodel/AlignedCodonFrame.java
@@ -472,7 +472,8 @@ public class AlignedCodonFrame
 
     for (SequenceToSequenceMapping ssm : mappings)
     {
-      if (ssm.mapping.to == protein)
+      if (ssm.mapping.to == protein
+              && ssm.mapping.getMap().getFromRatio() == 3)
       {
         ml = ssm.mapping.map;
         dnaSeq = ssm.fromSeq;