JAL-2301 made T hydrophobic as per the cited conservation method

diff --git a/src/jalview/schemes/ResidueProperties.java b/src/jalview/schemes/ResidueProperties.java
index f855fde..4d46279 100755 (executable)
--- a/src/jalview/schemes/ResidueProperties.java
+++ b/src/jalview/schemes/ResidueProperties.java
@@ -935,7 +935,7 @@ public class ResidueProperties
     hydrophobic.put("D", ZERO);
     hydrophobic.put("N", ZERO);
     hydrophobic.put("S", ZERO);
-    hydrophobic.put("T", ZERO);
+    hydrophobic.put("T", ONE);
     hydrophobic.put("P", ZERO);
   }
 

diff --git a/test/jalview/schemes/ResiduePropertiesTest.java b/test/jalview/schemes/ResiduePropertiesTest.java
index 41d7448..be6a10c 100644 (file)
--- a/test/jalview/schemes/ResiduePropertiesTest.java
+++ b/test/jalview/schemes/ResiduePropertiesTest.java
@@ -1570,7 +1570,7 @@ public class ResiduePropertiesTest
     checkProperty("polar", "YWHRKTSNDEQ-*X");
     checkProperty("positive", "HKR-*");
     checkProperty("proline", "P-*");
-    checkProperty("hydrophobic", "MILVFYWHKCGAC-*X");
+    checkProperty("hydrophobic", "MILVFYWHKTGAC-*X");
   }
 
   /**