JAL-2110 comment on failing test (consider skipping for release ?)
authorJim Procter <jprocter@issues.jalview.org>
Thu, 4 Aug 2016 19:55:28 +0000 (20:55 +0100)
committerJim Procter <jprocter@issues.jalview.org>
Thu, 4 Aug 2016 19:55:28 +0000 (20:55 +0100)
test/jalview/analysis/AlignmentUtilsTests.java

index 7661c5d..237aaac 100644 (file)
@@ -2449,6 +2449,8 @@ public class AlignmentUtilsTests
   {
     SequenceI dna1 = new Sequence("dna1", "cccGGGTTTaaa");
     SequenceI dna2 = new Sequence("dna2", "CCCgggtttAAA");
+    // See JAL-2110 - this test will fail due to alignAs not coping with
+    // distinct sequences sharing the same dataset sequence reference
     SequenceI as1 = dna1.deriveSequence(), as2 = dna1.deriveSequence()
             .getSubSequence(3, 7), as3 = dna2.deriveSequence();
     as1.insertCharAt(6, 5, '-');