load sequenceURLLinks static method
authoramwaterhouse <Andrew Waterhouse>
Mon, 29 Aug 2005 13:59:30 +0000 (13:59 +0000)
committeramwaterhouse <Andrew Waterhouse>
Mon, 29 Aug 2005 13:59:30 +0000 (13:59 +0000)
src/jalview/gui/Preferences.java

index bf26c0d..bec82a5 100755 (executable)
@@ -45,8 +45,26 @@ import jalview.bin.Cache;
 public class Preferences extends GPreferences\r
 {\r
     /** Holds name and link separated with | character. Sequence ID must be $SEQUENCE_ID$ */\r
-    public static Vector sequenceURLLinks = new Vector();\r
-    static { sequenceURLLinks.addElement("SRS|http://srs.ebi.ac.uk/srs7bin/cgi-bin/wgetz?-e+[uniprot-all:$SEQUENCE_ID$]+-vn+2");}\r
+    public static Vector sequenceURLLinks;\r
+    static\r
+    {\r
+      String string = Cache.getDefault("SEQUENCE_LINKS",\r
+                                       "SRS|http://srs.ebi.ac.uk/srs7bin/cgi-bin/wgetz?-e+[uniprot-all:$SEQUENCE_ID$]+-vn+2");\r
+      sequenceURLLinks = new Vector();\r
+\r
+      try\r
+      {\r
+        StringTokenizer st = new StringTokenizer(string, "|");\r
+        while (st.hasMoreElements())\r
+        {\r
+          sequenceURLLinks.addElement(st.nextToken() + "|" + st.nextToken());\r
+        }\r
+      }\r
+      catch (Exception ex)\r
+      {\r
+        System.out.println(ex + "\nError parsing sequence links");\r
+      }\r
+    }\r
     Vector nameLinks, urlLinks;\r
 \r
     JInternalFrame frame;\r
@@ -124,20 +142,6 @@ public class Preferences extends GPreferences
   /****************************************************\r
    * Set up Connections\r
    */\r
-\r
-      string = Cache.getDefault("SEQUENCE_LINKS",\r
-                            "SRS|http://srs.ebi.ac.uk/srs7bin/cgi-bin/wgetz?-e+[uniprot-all:$SEQUENCE_ID$]+-vn+2");\r
-      sequenceURLLinks = new Vector();\r
-\r
-        try{\r
-          StringTokenizer st = new StringTokenizer(string, "|");\r
-          while (st.hasMoreElements())\r
-          {\r
-            sequenceURLLinks.addElement(st.nextToken() + "|" + st.nextToken());\r
-          }\r
-        }catch(Exception ex)\r
-        {System.out.println(ex+"\nError parsing sequence links");}\r
-\r
         nameLinks = new Vector();\r
         urlLinks = new Vector();\r
         for(int i=0; i<sequenceURLLinks.size(); i++)\r