Ignore list created

diff --git a/lib/.cvsignore b/lib/.cvsignore
new file mode 100644 (file)
index 0000000..5feaa93
--- /dev/null
+++ b/lib/.cvsignore
@@ -0,0 +1,35 @@
+NOBACK
+XmlSchema-SNAPSHOT.jar
+annogen-0.1.0.jar
+axiom-api-1.0-RC2.jar
+axiom-dom-1.0-RC2.jar
+axiom-impl-1.0-RC2.jar
+axis-wsdl4j-1.2.jar
+axis.jar.bak
+axis.jar.commons
+axis2-adb-1.0-RC2.jar
+axis2-kernel-1.0-RC2.jar
+backport-util-concurrent-2.0_01_pd.jar
+backport-util-concurrent-2.1.jar
+castor.zip
+commons-codec-1.2.jar
+commons-codec-1.3.jar
+commons-fileupload-1.0.jar
+commons-httpclient-3.0.jar
+commons-logging-1.0.4.jar
+geronimo-spec-activation-1.0.2-rc4.jar
+geronimo-spec-javamail-1.3.1-rc5.jar
+geronimo-spec-jms-1.1-rc4.jar
+jaxen-1.1-beta-7.jar
+jhall.jar.bak
+log4j-1.2.13.jar
+maven-itest-plugin-1.0.jar
+phylip-client-axis-1.3.jar
+policy-1.0.1-RC.jar
+policy-1.0.jar
+servletapi-2.3.jar
+stax-api-1.0.jar
+wstx-asl-2.8.2.jar
+wstx-asl-2.9.2.jar
+xercesImpl.jar.bak
+xml-apis.jar.bak

diff --git a/resources/.cvsignore b/resources/.cvsignore
new file mode 100644 (file)
index 0000000..43d40c0
--- /dev/null
+++ b/resources/.cvsignore
@@ -0,0 +1,2 @@
+axisCommons
+jalview_mapping.xml

diff --git a/resources/images/.cvsignore b/resources/images/.cvsignore
new file mode 100644 (file)
index 0000000..1d13d05
--- /dev/null
+++ b/resources/images/.cvsignore
@@ -0,0 +1,10 @@
+dna.gif
+dna1.gif
+dna2.gif
+dna3.gif
+dna4.gif
+dna5.gif
+dna6.gif
+dna7.gif
+dna8.gif
+dna9.gif

diff --git a/schemas/.cvsignore b/schemas/.cvsignore
new file mode 100644 (file)
index 0000000..83ef99a
--- /dev/null
+++ b/schemas/.cvsignore
@@ -0,0 +1 @@
+.#jalview.xsd.1.5
\ No newline at end of file

diff --git a/src/MCview/.cvsignore b/src/MCview/.cvsignore
new file mode 100644 (file)
index 0000000..5ee52a6
--- /dev/null
+++ b/src/MCview/.cvsignore
@@ -0,0 +1 @@
+.#PDBViewer.java.1.3
\ No newline at end of file

diff --git a/src/jalview/.cvsignore b/src/jalview/.cvsignore
new file mode 100644 (file)
index 0000000..f436451
--- /dev/null
+++ b/src/jalview/.cvsignore
@@ -0,0 +1 @@
+vamsas
\ No newline at end of file

diff --git a/src/jalview/analysis/.cvsignore b/src/jalview/analysis/.cvsignore
new file mode 100644 (file)
index 0000000..33989c8
--- /dev/null
+++ b/src/jalview/analysis/.cvsignore
@@ -0,0 +1,3 @@
+.#NJTree.java.1.22
+.#NJTree.java.1.23
+.#SeqsetUtils.java.1.8

diff --git a/src/jalview/datamodel/.cvsignore b/src/jalview/datamodel/.cvsignore
new file mode 100644 (file)
index 0000000..a4d99ef
--- /dev/null
+++ b/src/jalview/datamodel/.cvsignore
@@ -0,0 +1,5 @@
+.#Alignment.java.1.41
+.#Alignment.java.1.42
+.#Alignment.java.1.43
+.#Alignment.java.1.44
+.#AlignmentI.java.1.21

diff --git a/src/jalview/gui/.cvsignore b/src/jalview/gui/.cvsignore
new file mode 100644 (file)
index 0000000..a1659ce
--- /dev/null
+++ b/src/jalview/gui/.cvsignore
@@ -0,0 +1,11 @@
+.#AlignViewport.java.1.62
+.#AlignViewport.java.1.63
+.#AnnotationPanel.java.1.57
+.#FeatureRenderer.java.1.22
+.#OverviewPanel.java.1.26
+.#Preferences.java.1.26
+.#Preferences.java.1.28
+.#Preferences.java.1.29
+.#SequenceFetcher.java.1.23
+.#SequenceFetcher.java.1.24
+.#TreePanel.java.1.33

diff --git a/src/jalview/io/.cvsignore b/src/jalview/io/.cvsignore
new file mode 100644 (file)
index 0000000..77175a8
--- /dev/null
+++ b/src/jalview/io/.cvsignore
@@ -0,0 +1 @@
+.#DasSequenceFeatureFetcher.java.1.17
\ No newline at end of file

diff --git a/src/jalview/jbgui/.cvsignore b/src/jalview/jbgui/.cvsignore
new file mode 100644 (file)
index 0000000..1cb80c3
--- /dev/null
+++ b/src/jalview/jbgui/.cvsignore
@@ -0,0 +1,3 @@
+#GPreferences.java#
+.#GPreferences.java.1.20
+.#GPreferences.java.1.22

diff --git a/src/jalview/util/.cvsignore b/src/jalview/util/.cvsignore
new file mode 100644 (file)
index 0000000..c5b8965
--- /dev/null
+++ b/src/jalview/util/.cvsignore
@@ -0,0 +1 @@
+InstanceDiscoverer.java
\ No newline at end of file

diff --git a/src/jalview/ws/.cvsignore b/src/jalview/ws/.cvsignore
new file mode 100644 (file)
index 0000000..be25ffb
--- /dev/null
+++ b/src/jalview/ws/.cvsignore
@@ -0,0 +1,3 @@
+.#JPredClient.java.1.25
+.#JPredClient.java.1.31
+.#MsaWSClient.java.1.26