this.seqs = seqs

diff --git a/src/jalview/analysis/NJTree.java b/src/jalview/analysis/NJTree.java
index 729fd57..423e235 100755 (executable)
--- a/src/jalview/analysis/NJTree.java
+++ b/src/jalview/analysis/NJTree.java
@@ -78,6 +78,7 @@ public class NJTree
      */\r
     public NJTree(SequenceI[] seqs,  NewickFile treefile)\r
     {\r
+        this.sequence = seqs;\r
         top = treefile.getTree();\r
 \r
         if (sequenceString == null)\r