JAL-2350 update uniprot test - fails due to ENA crosref having “0 (PROMOTED)” as... patch/r2_11_2_6/JAL-2350_embl_xrefs_from_uniprot_version_consistency
authorJim Procter <j.procter@dundee.ac.uk>
Mon, 19 Dec 2022 10:33:49 +0000 (10:33 +0000)
committerJim Procter <j.procter@dundee.ac.uk>
Mon, 19 Dec 2022 10:33:49 +0000 (10:33 +0000)
test/jalview/ws/dbsources/UniprotTest.java

index a7eedf1..c551882 100644 (file)
@@ -224,14 +224,18 @@ public class UniprotTest
     res = DBRefUtils.searchRefsForSource(seq.getDBRefs(),
             DBRefSource.UNIPROT);
     assertEquals(2, res.size());
-    res = DBRefUtils.searchRefs(seq.getDBRefs(), "AAK85932");
-    assertEquals(1, res.size());
-    assertTrue("1".equals(res.get(0).getVersion()));
     /*
      * NB this test fragile - relies on ordering being preserved
      */
     assertTrue(res.get(0).isCanonical());
     assertFalse(res.get(1).isCanonical());
+    /*
+     * check crossrefs
+     */
+    res = DBRefUtils.searchRefs(seq.getDBRefs(), "AAK85932");
+    assertEquals(1, res.size());
+    assertTrue("1".equals(res.get(0).getVersion()));
+
   }
 
   /**