| 2006-05-12 |
amwaterhouse | pass viewport to fileloader, as we need to fireproperty... |
blob | commitdiff |
| 2006-05-11 |
amwaterhouse | Recently loaded files, urls, append sequences to Alignment |
blob | commitdiff | diff to current |
| 2006-05-10 |
amwaterhouse | Copy and paste of annotations with seqrefs |
blob | commitdiff | diff to current |
| 2006-04-28 |
amwaterhouse | If autoCalculate selected, recalculate immediately |
blob | commitdiff | diff to current |
| 2006-04-19 |
amwaterhouse | Multiple views, alignpanels not being used |
blob | commitdiff | diff to current |
| 2006-04-19 |
amwaterhouse | Alignment might not have any annotations |
blob | commitdiff | diff to current |
| 2006-04-06 |
amwaterhouse | Hide ref to HiddenRegion |
blob | commitdiff | diff to current |
| 2006-04-06 |
amwaterhouse | Must copy feature settings from one frame to another... |
blob | commitdiff | diff to current |
| 2006-04-05 |
amwaterhouse | Padgap history |
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| 2006-04-04 |
amwaterhouse | loadDataFile is public |
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| 2006-04-04 |
amwaterhouse | Autocalculate consensus |
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| 2006-03-24 |
amwaterhouse | Load data file added |
blob | commitdiff | diff to current |
| 2006-03-16 |
amwaterhouse | historyItem.restore |
blob | commitdiff | diff to current |
| 2006-03-08 |
amwaterhouse | IdentifyFile should not be static |
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| 2006-02-24 |
amwaterhouse | Cannot delete residues |
blob | commitdiff | diff to current |
| 2006-02-16 |
amwaterhouse | translate cDNA adjusted |
blob | commitdiff | diff to current |
| 2006-02-16 |
amwaterhouse | Read startgroup and endgroup in features file |
blob | commitdiff | diff to current |
| 2006-02-15 |
amwaterhouse | Dont use FeatureFetcher if nucleotide |
blob | commitdiff | diff to current |
| 2006-02-13 |
amwaterhouse | Parsing features file - dont adjust for alignment position |
blob | commitdiff | diff to current |
| 2006-02-09 |
amwaterhouse | New implementation for holding search results |
blob | commitdiff | diff to current |
| 2006-02-08 |
amwaterhouse | Copy dataset annotations for paste(this) |
blob | commitdiff | diff to current |
| 2006-02-03 |
amwaterhouse | Reading features files readded as ref to FeatureRendere... |
blob | commitdiff | diff to current |
| 2006-01-30 |
amwaterhouse | Drop annotations onto alignment |
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| 2006-01-11 |
jprocter | refactored Alignframe padGaps code to Alignment and... |
blob | commitdiff | diff to current |
| 2005-12-22 |
amwaterhouse | Remove import |
blob | commitdiff | diff to current |
| 2005-12-08 |
amwaterhouse | If dataset seq exists for paste to existing alignment... |
blob | commitdiff | diff to current |
| 2005-12-06 |
amwaterhouse | Add features to dataset |
blob | commitdiff | diff to current |
| 2005-12-06 |
amwaterhouse | After merge |
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| 2005-10-03 |
amwaterhouse | Remove development code |
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| 2005-09-30 |
amwaterhouse | Remove redundancy in Eclipse |
blob | commitdiff | diff to current |
| 2005-09-22 |
amwaterhouse | Create instance of FormatAdapter |
blob | commitdiff | diff to current |
| 2005-09-22 |
amwaterhouse | If Mac user hasnt selected file format, give warning |
blob | commitdiff | diff to current |
| 2005-09-21 |
amwaterhouse | Sequences must be aligned before PCA |
blob | commitdiff | diff to current |
| 2005-09-20 |
amwaterhouse | PCAPanel just requires viewport |
blob | commitdiff | diff to current |
| 2005-09-19 |
amwaterhouse | Dont add ServiceListeners if desktop is null |
blob | commitdiff | diff to current |
| 2005-09-15 |
amwaterhouse | remove system.out |
blob | commitdiff | diff to current |
| 2005-09-14 |
amwaterhouse | Copy and paste uses FASTA format |
blob | commitdiff | diff to current |
| 2005-09-14 |
amwaterhouse | PCA is in outofmemory try-catch |
blob | commitdiff | diff to current |
| 2005-09-12 |
amwaterhouse | Remove gaps in regions, not char by char |
blob | commitdiff | diff to current |
| 2005-09-12 |
amwaterhouse | Update overview in alignmentChanged |
blob | commitdiff | diff to current |
| 2005-09-08 |
amwaterhouse | Move tree property change to treePanel |
blob | commitdiff | diff to current |
| 2005-09-08 |
amwaterhouse | If no consensus, disable certain colour options |
blob | commitdiff | diff to current |
| 2005-09-01 |
amwaterhouse | firePropertyChange if sequences deleted |
blob | commitdiff | diff to current |
| 2005-09-01 |
amwaterhouse | Use propertyListener for alignment edits |
blob | commitdiff | diff to current |
| 2005-08-30 |
amwaterhouse | Update colours after remove left, cut, paste |
blob | commitdiff | diff to current |
| 2005-08-29 |
amwaterhouse | Reset all colour schemes after gaps removed |
blob | commitdiff | diff to current |
| 2005-08-29 |
amwaterhouse | Keep startRes the same after removing columns |
blob | commitdiff | diff to current |
| 2005-08-29 |
amwaterhouse | Reset ClustalX after removing gaps |
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| 2005-08-26 |
amwaterhouse | When saving, use print instead of println |
blob | commitdiff | diff to current |
| 2005-08-23 |
amwaterhouse | Dont make new frame reference in Buildwebservicemenu |
blob | commitdiff | diff to current |
| 2005-08-23 |
amwaterhouse | Set size and location of frame before visible |
blob | commitdiff | diff to current |
| 2005-08-22 |
amwaterhouse | Check for null colour |
blob | commitdiff | diff to current |
| 2005-08-22 |
amwaterhouse | Conservation colour scheme is no more |
blob | commitdiff | diff to current |
| 2005-08-18 |
amwaterhouse | Add name and mouse listener to new user colour menuitems |
blob | commitdiff | diff to current |
| 2005-08-18 |
amwaterhouse | Blosum62 PID and conservation bug fixed |
blob | commitdiff | diff to current |
| 2005-08-18 |
jprocter | GUI typo |
blob | commitdiff | diff to current |
| 2005-08-17 |
jprocter | Gui Modifications for Service Discovery. |
blob | commitdiff | diff to current |
| 2005-08-17 |
amwaterhouse | updateUserColourMenu |
blob | commitdiff | diff to current |
| 2005-08-15 |
amwaterhouse | IgnoreGapsConsensus |
blob | commitdiff | diff to current |
| 2005-07-29 |
amwaterhouse | Correct label for end res in copy |
blob | commitdiff | diff to current |
| 2005-07-18 |
amwaterhouse | Copy seq ordering bug fixed |
blob | commitdiff | diff to current |
| 2005-07-11 |
amwaterhouse | Must check if group.sequences are null in remove gaps |
blob | commitdiff | diff to current |
| 2005-07-11 |
amwaterhouse | check groupsize is non zero |
blob | commitdiff | diff to current |
| 2005-07-07 |
amwaterhouse | Remove all gaps must check jSize |
blob | commitdiff | diff to current |
| 2005-06-30 |
amwaterhouse | Formatting changes |
blob | commitdiff | diff to current |
| 2005-06-16 |
amwaterhouse | Sort Groups modified |
blob | commitdiff | diff to current |
| 2005-06-16 |
amwaterhouse | remove gaps applies to selected area |
blob | commitdiff | diff to current |
| 2005-06-14 |
jprocter | pad-1 gaps fixed. |
blob | commitdiff | diff to current |
| 2005-06-14 |
amwaterhouse | Deselect sets annotationPanel activeres null |
blob | commitdiff | diff to current |
| 2005-06-14 |
amwaterhouse | PaintRefresher must be sent alignment |
blob | commitdiff | diff to current |
| 2005-06-14 |
amwaterhouse | Returns TreePanel when opening Newick |
blob | commitdiff | diff to current |
| 2005-06-08 |
amwaterhouse | Recalc accelerated |
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| 2005-06-08 |
amwaterhouse | Formatted source |
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| 2005-06-08 |
amwaterhouse | GPL license added |
blob | commitdiff | diff to current |
| 2005-06-03 |
jprocter | Reinstated 'create tree from selected region only'... |
blob | commitdiff | diff to current |
| 2005-06-02 |
amwaterhouse | Name of xml file changed |
blob | commitdiff | diff to current |
| 2005-05-30 |
jprocter | Added clustalW 'realignment' (primitive) |
blob | commitdiff | diff to current |
| 2005-05-30 |
jprocter | added default ClustalWS or MuscleWS to remove gaps. |
blob | commitdiff | diff to current |
| 2005-05-30 |
jprocter | fixed stacktrace potential for pairwise alignment action. |
blob | commitdiff | diff to current |
| 2005-05-27 |
jprocter | right ordering for RedundancyPanel constructor |
blob | commitdiff | diff to current |
| 2005-05-27 |
jprocter | recovered changes from v 1.84 |
blob | commitdiff | diff to current |
| 2005-05-27 |
amwaterhouse | New cut and paste |
blob | commitdiff | diff to current |
| 2005-05-26 |
jprocter | fixed redundancy Undo and allowed it to work on UNALIGN... |
blob | commitdiff | diff to current |
| 2005-05-26 |
jprocter | bug fix in jpred client. TreeViewer display state and... |
blob | commitdiff | diff to current |
| 2005-05-25 |
amwaterhouse | usercolours changed |
blob | commitdiff | diff to current |
| 2005-05-25 |
jprocter | tidied up system.out messages and moved many to stderr. |
blob | commitdiff | diff to current |
| 2005-05-24 |
jprocter | Added more firePropertyChange calls - mainly for sequen... |
blob | commitdiff | diff to current |
| 2005-05-24 |
jprocter | added PropertyChangeListeners for alignviewport.alignme... |
blob | commitdiff | diff to current |
| 2005-05-24 |
amwaterhouse | setDefaultFileFormat |
blob | commitdiff | diff to current |
| 2005-05-23 |
jprocter | Added PadGaps and made treeSortMenu dynamic (it gets... |
blob | commitdiff | diff to current |
| 2005-05-23 |
amwaterhouse | new savestate method |
blob | commitdiff | diff to current |
| 2005-05-23 |
amwaterhouse | historyitem added |
blob | commitdiff | diff to current |
| 2005-05-22 |
jprocter | include MsaWS ordering but not perfect (undo destroys... |
blob | commitdiff | diff to current |
| 2005-05-22 |
jprocter | Added alignment ordering option to 'Sort by' and implem... |
blob | commitdiff | diff to current |
| 2005-05-20 |
amwaterhouse | copy order maintained |
blob | commitdiff | diff to current |
| 2005-05-20 |
amwaterhouse | Fasta FASTA |
blob | commitdiff | diff to current |
| 2005-05-19 |
amwaterhouse | loading/saving changes |
blob | commitdiff | diff to current |
| 2005-05-03 |
amwaterhouse | formatAdapter.formatSequences and maintain annotation... |
blob | commitdiff | diff to current |
| 2005-04-29 |
amwaterhouse | preferences moved to desktop |
blob | commitdiff | diff to current |
| 2005-04-28 |
amwaterhouse | Preferences panel added |
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| next |
git://source.jalview.org / jalview.git / history