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2016-01-07 tcofoegbumerge tree | commitdiff
2016-01-07 tcofoegbuJAL-1479 implemented timestamp based caching of SIFTS... tree | commitdiff
2015-12-09 Jim ProcterJAL-1982 hotfix to prevent NPE with applet launch on... tree | commitdiff
2015-12-03 gmungocJAL-1827 code and comment tidy up tree | commitdiff
2015-12-02 gmungocJAL-1827 refactored to handle missing residues better tree | commitdiff
2015-12-02 gmungocJAL-1827 added overloaded method for convenience tree | commitdiff
2015-11-25 tcofoegbuJAL-1479 refactored DBRef fetching code to StructureCho... tree | commitdiff
2015-11-25 tcofoegbuJAL-1479 applet build debug tree | commitdiff
2015-11-25 tcofoegbuJAL-1479 bugfix after decoupling SIFTS preference settings tree | commitdiff
2015-11-23 tcofoegbuJAL-1479 commented out DBRef fetching code from SIFTS... tree | commitdiff
2015-11-17 tcofoegbuJAL-1479 Refactored Sifts configuration preference... tree | commitdiff
2015-11-16 tcofoegbuJAL-1967 JAL-1479 refactored sequence<->structure mappi... tree | commitdiff
2015-11-13 tcofoegbuJAL-1479 added transfer of residue annotation for SIFTS... tree | commitdiff
2015-11-11 tcofoegbuJAL-1479 JAL-1957 Added code to enable simultaneous... tree | commitdiff
2015-11-11 tcofoegbumerge tree | commitdiff
2015-11-11 tcofoegbuJAL-1957 JAL-1479 Further optimisation of SIFTs Client... features/JAL-1479_SIFTS-mapping tree | commitdiff
2015-11-10 tcofoegbuJAL 1960 added code to restrict structure chooser to... tree | commitdiff
2015-11-05 tcofoegbuJAL-1479 SiftClient house keeping tree | commitdiff
2015-11-05 tcofoegbuJAL-1942 JAL-1479 refactored SequenceI.getDBRef/Sequenc... tree | commitdiff
2015-11-02 tcofoegbuJAL-1955 Uniprot sequence fetcher refactor tree | commitdiff
2015-10-30 Jim ProcterJAL-1954 rejigged PFAMFile to split on ‘\t’ if no space... tree | commitdiff
2015-10-29 tcofoegbuJAL-1926 JAL-1479 updated PDBfile fetcher to add source... tree | commitdiff
2015-10-28 tcofoegbuJAL-1479 added support for SIFTs mapping output viewing... tree | commitdiff
2015-10-28 tcofoegbuJAL-1952 bugfix tree | commitdiff
2015-10-28 tcofoegbuJAL-1887 JAL-1479 bugfix for incorrect start/end for... tree | commitdiff
2015-10-23 gmungocJAL-1943 don't try to unmarshal non-xml files in V1... tree | commitdiff
2015-10-22 tcofoegbuJAL-1479 added basic support for SIFTs mapping - more... tree | commitdiff
2015-10-22 tcofoegbuJAL-1479 implemented preferences for SIFTs / Needleman... tree | commitdiff
2015-10-22 tcofoegbuJAL-1942 JAL-1479 DBRefFetcher refactor tree | commitdiff
2015-10-22 gmungocJAL-1932 TrimRegionCommand bug fix, tests and purge... tree | commitdiff
2015-10-15 tcofoegbuJAL-1479 refactored SequenceI interface - changed getDB... tree | commitdiff
2015-10-15 Jim ProcterJAL-1923 formatting tree | commitdiff
2015-10-15 Jim ProcterJAL-1923 add groups to codon-complement and notify... tree | commitdiff
2015-10-15 Jim ProcterJAL-1923 fix: don’t add group twice tree | commitdiff
2015-10-14 tcofoegbuJAL-1926 created interface for DBRefEntry tree | commitdiff
2015-10-14 tcofoegbuJAL-1926 added supporting model changes to enable savin... tree | commitdiff
2015-10-13 tcofoegbuJAL-1479 added SIFTS XSD and generated JAXB bindings... tree | commitdiff
2015-10-08 Jim ProcterJAL-1894 add licensing tree | commitdiff
2015-10-08 Jim ProcterJAL-1894 organise imports tree | commitdiff
2015-10-08 tcofoegbumerge tree | commitdiff
2015-10-07 Jim ProcterJAL-1894 source formatting tree | commitdiff
2015-10-07 Jim ProcterJAL-1894 organise imports tree | commitdiff
2015-10-07 tcofoegbuJAL-1912 added documentation features/JAL-1912_biojson-per-sequence-annotation tree | commitdiff
2015-10-07 Jim ProcterJAL-1912 formatting tree | commitdiff
2015-10-07 Jim ProcterJAL-1912 javadoc for adjustForAlignment stating current... tree | commitdiff
2015-10-07 Jim ProcterJAL-1912 efficiency: look up sequenceMapping once per... tree | commitdiff
2015-10-07 Jim ProcterMerge branch 'features/JAL-1912_biojson-per-sequence... tree | commitdiff
2015-10-05 tcofoegbuJAL-1912 house keeping tree | commitdiff
2015-10-05 tcofoegbuJAL-1912 added null check for SequenceMapping variable... tree | commitdiff
2015-10-05 gmungocJAL-1812 set/return currentAlFrame for Groovy in headle... tree | commitdiff
2015-10-05 Jim ProcterMerge branch 'develop' into features/JAL-1912_biojson... tree | commitdiff
2015-10-05 gmungocJAL-1684 JAL-1452 new applet parameters defaultColourNuc tree | commitdiff
2015-10-05 tcofoegbuJAL-1908 bugfix tree | commitdiff
2015-10-05 tcofoegbuJAL-1912 updated AnnotationDisplaySettingPojo tree | commitdiff
2015-10-02 gmungocJAL-1815 restore split frame geometry including horizon... tree | commitdiff
2015-10-02 Jim ProcterJAL-1900 JAL-1625 disable iconify button for internal... tree | commitdiff
2015-10-01 tcofoegbuJAL-1912 Double.NaN breaks JSON serialization - added... tree | commitdiff
2015-10-01 tcofoegbuJAL-1912 refactor annotation refsequence assignemnt... tree | commitdiff
2015-09-30 tcofoegbuhouse keeping tree | commitdiff
2015-09-30 tcofoegbuJAL-1860 house keeping tree | commitdiff
2015-09-30 tcofoegbuJAL-1852 made disabling querying of unpublished PDB... tree | commitdiff
2015-09-30 tcofoegbuJAL-1912 added support of tcoffee annotation and other... tree | commitdiff
2015-09-30 tcofoegbuJAL-1852 disable querying of unpublished PDB entries... tree | commitdiff
2015-09-29 tcofoegbuJAL-1896 fixed NPE for RNA Helice without equivalent... tree | commitdiff
2015-09-28 tcofoegbumerge tree | commitdiff
2015-09-28 tcofoegbuJAL-1896 revised implementation to construct a ColourSc... tree | commitdiff
2015-09-28 gmungocJAL-1909 repaint complementary alignment panel after... tree | commitdiff
2015-09-25 gmungocJAL-1859 try hoverDelay of 0.1s in Jmol for more respon... tree | commitdiff
2015-09-25 tcofoegbumerge tree | commitdiff
2015-09-25 tcofoegbuJAL-1907 bugfix for NPE while parsing a features file tree | commitdiff
2015-09-25 gmungocJAL-1815 restore split frame geometry correctly includi... tree | commitdiff
2015-09-25 tcofoegbumerge tree | commitdiff
2015-09-25 tcofoegbuJAL-1860 disabled default enter behaviour on pdb search... tree | commitdiff
2015-09-24 gmungocJAL-1905 parse url including & correctly tree | commitdiff
2015-09-24 gmungocJAL-1904 parse feature file colours on to alignment... tree | commitdiff
2015-09-24 tcofoegbuJAL-1860 only allow enter key when valid selection... tree | commitdiff
2015-09-24 tcofoegbuJAL-1860 keyboard operation of pdb sequence fetcher... tree | commitdiff
2015-09-24 tcofoegbuJAL-1896 bugfix to enabled Jalview restore clustal... tree | commitdiff
2015-09-22 tcofoegbuJAL-1774 house keeping tree | commitdiff
2015-09-21 tcofoegbumerge tree | commitdiff
2015-09-21 tcofoegbuJAL-1774 modifed warning dialog to use JVDialog rather... tree | commitdiff
2015-09-21 gmungocJAL-1799 update height of annotation labels to match... tree | commitdiff
2015-09-21 gmungocJAL-1152 set initial state of show alignment/sequence... tree | commitdiff
2015-09-18 gmungocMerge branch 'develop' of https://source.jalview.org... tree | commitdiff
2015-09-18 Jim ProcterJAL-1270 JAL-1889 move the stevesoft test back into... tree | commitdiff
2015-09-18 Jim ProcterJAL-1889 remove non-UTF8 characters so we can build... tree | commitdiff
2015-09-18 tcofoegbuJAL-1774 JAL-1506 revised implementaion for clear highl... tree | commitdiff
2015-09-18 tcofoegbuJAL-1506 revised implementation to clear only selected... tree | commitdiff
2015-09-18 gmungocJAL-1859 reinstated full path to file option (for local... tree | commitdiff
2015-09-17 tcofoegbuJAL-1774 bugfix for misleading message after trying... tree | commitdiff
2015-09-16 tcofoegbumerge tree | commitdiff
2015-09-16 tcofoegbuJAL-1486 off-by-one error bugfix tree | commitdiff
2015-09-16 gmungocJAL-1882 variable renamed to avoid confusion with membe... tree | commitdiff
2015-09-16 gmungocMerge branch 'develop' of https://source.jalview.org... tree | commitdiff
2015-09-16 gmungocJAL-1885 small fix to isVersionStringLaterThan plus... tree | commitdiff
2015-09-16 tcofoegbumerge tree | commitdiff
2015-09-16 tcofoegbuJAL-1881 Bugfix for annotation import from BioJS tree | commitdiff
2015-09-16 gmungocJAL-1859 refactor duplicated code to new HttpUtils... tree | commitdiff
2015-09-16 gmungocJAL-1859 code tidy, remove 'absolute URL' option tree | commitdiff
2015-09-16 gmungocJAL-1859 debug logging removed tree | commitdiff
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