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JAL-1698 bug fix to enable addition of a single structure to an already launched...
[jalview.git] / src /
2015-04-17 tcofoegbuJAL-1698 bug fix to enable addition of a single structu... bug/JAL-1698_Append-Structures tree | commitdiff
2015-04-14 tcofoegbuMerge branch 'bug/Jal-1696_disable-pdb_id-field-setting... tree | commitdiff
2015-04-14 tcofoegbuJAL-1696 disabled editing of PDB Id field from settings bug/Jal-1696_disable-pdb_id-field-settings tree | commitdiff
2015-04-14 tcofoegbuMerge branch 'Release_2_8_3_Branch' of https://source... tree | commitdiff
2015-04-13 gmungocJAL-1693 make exon alignment for get-xref splitframe... tree | commitdiff
2015-04-13 gmungocJAL-1681 work around ConcurrentModificationException... tree | commitdiff
2015-04-13 gmungocJAL-1690 show 'scale protein' in protein _and_ dna... tree | commitdiff
2015-04-13 gmungocJAL-1695 new property ENABLE_SPLIT_FRAME tree | commitdiff
2015-04-13 gmungocJAL-1695 parameter controls whether SplitFrame is enabled tree | commitdiff
2015-04-08 gmungocJAL-1270 protection against NullPointer when run as... tree | commitdiff
2015-04-08 gmungocJAL-1691 applet SplitFrame scrolling; pull up of 5... tree | commitdiff
2015-04-07 gmungocJAL-1691 linked scrollling in split frame (Desktop) tree | commitdiff
2015-04-07 gmungocJAL-1691 defensive check for null tree | commitdiff
2015-04-02 gmungocJAL-1690 'scale protein as cDNA' options in Preferences... tree | commitdiff
2015-04-01 gmungocJAL-845 fixed start/end range of a mapped SequenceGroup tree | commitdiff
2015-04-01 gmungocJAL-1264 reinstate Show annotations menu item tree | commitdiff
2015-03-30 gmungocJAL-1264 remove broken applet build dependencies tree | commitdiff
2015-03-30 gmungocJAL-1596 refactoring to allow unit tests to start and... tree | commitdiff
2015-03-27 tcofoegbuJAL-1667 updated the collection type for searchSummaryF... tree | commitdiff
2015-03-27 tcofoegbumerge commit tree | commitdiff
2015-03-26 tcofoegbuJAL-1667 updated parseJsonExceptionString method in... features/JAL-1667_PDBe_Search_API tree | commitdiff
2015-03-26 gmungocMerge develop to Release_2_8_3_Branch tree | commitdiff
2015-03-26 gmungocJAL-1688 compiler warnings removed tree | commitdiff
2015-03-25 tcofoegbuJAL-1667 clean up commented codes in PopupMenu.java... tree | commitdiff
2015-03-25 tcofoegbuJAL-1668 Tab for summary config, auto refresh after... tree | commitdiff
2015-03-19 tcofoegbuJAL-1668 finally clean up tree | commitdiff
2015-03-18 Charles OfoegbuJAL-1668 house keeping tree | commitdiff
2015-03-18 Charles OfoegbuJAL-1668 added PDBDocFieldPreference for configuring... tree | commitdiff
2015-03-16 Charles OfoegbuJAL-1668 added validation for manual entry of pdb struc... tree | commitdiff
2015-03-15 Charles OfoegbuJAL-1667 updated test and internationalization messages tree | commitdiff
2015-03-09 Jim ProcterJAL-1565 loading a concise file causes insertions to... tree | commitdiff
2015-03-06 Charles OfoegbuJAL-1668 added filtering and sorting capabilites tree | commitdiff
2015-03-06 Jim ProcterJAL-1683 replace year/version strings with tokens in... tree | commitdiff
2015-03-06 Jim Procterreassign features already created/documented for 2... tree | commitdiff
2015-03-06 Jim ProcterMerge commit 'ab43013b7e357b84b4abade0dba949668dfb2a0e... tree | commitdiff
2015-03-06 Charles OfoegbuJAL-1667 refactoring to support JAL-1668 tree | commitdiff
2015-03-04 Charles OfoegbuJAL-1668 First version JAL-1668 tree | commitdiff
2015-03-02 Charles Ofoegbuhouse keeping tree | commitdiff
2015-02-27 Jim ProcterJAL-1678 - patch to make sure we only compare positions... tree | commitdiff
2015-02-27 Jim Procterfix for JAL-1678 tree | commitdiff
2015-02-26 Charles OfoegbuJAL-1667 PDBe Search Interface implementation tree | commitdiff
2015-02-19 gmungocJAL-1665 refactored Sequence.getSequenceFeatures features/sequenceFeatureRefactor tree | commitdiff
2015-02-12 Jim ProcterJAL-1350 pass the columnselection rather then selected... tree | commitdiff
2015-02-12 Jim ProcterJAL-1350 cloned method and tested equivalence for using... tree | commitdiff
2015-02-12 Jim ProcterJAL-1115 switch to lists in SequenceGroup tree | commitdiff
2015-02-12 Jim ProcterJAL-1115 typecast tree | commitdiff
2015-02-12 Jim Procterjavadoc tree | commitdiff
2015-02-12 Jim ProcterJAL-1115 List rather than vector for sequence groups... tree | commitdiff
2015-02-05 Charles Ofoegbumerge commit tree | commitdiff
2015-02-04 Charles OfoegbuJAL-1643 modified jalviewFileChooser to retain default... tree | commitdiff
2015-02-04 Charles OfoegbuJAL-1643 Modified JalviewFileChooser to have a more... tree | commitdiff
2015-02-02 Charles OfoegbuMerge branch 'bug/JAL-1644_Finder-logic-improvement... tree | commitdiff
2015-02-02 Charles OfoegbuJAL-1644 added null check for sequence description... tree | commitdiff
2015-02-02 Charles OfoegbuMerge commit tree | commitdiff
2015-02-02 Charles OfoegbuJAL-1644 revised Finder's implementation to use a flag... tree | commitdiff
2015-02-02 Charles OfoegbuMerge branch 'bug/JAL-1644_Finder-logic-improvement... tree | commitdiff
2015-02-02 Charles OfoegbuJAL-1644 improvment of finder logic to include the... tree | commitdiff
2015-01-28 Jim ProcterJAL-1565 automatically mark query sequence as the seque... tree | commitdiff
2015-01-28 Jim Procter JAL-674 patch to make Mapping.compareTransferredToR... tree | commitdiff
2015-01-27 gmungocJAL-1588 new class renamed tree | commitdiff
2015-01-26 gmungocMerge branch 'features/JAL-1588saveChimeraSession'... tree | commitdiff
2015-01-26 gmungocJAL-1588 restoring saved Chimera session(s) tree | commitdiff
2015-01-23 Charles OfoegbuMerge branch 'features/JAL-1553_improvement-select... tree | commitdiff
2015-01-23 gmungocJAL-1588 first working (?) restore of Chimera session... tree | commitdiff
2015-01-23 Charles OfoegbuJAL-1553 added help documentation and updated Annotatio... features/JAL-1553_improvement-select-column-by-annotation-row-query-interface tree | commitdiff
2015-01-23 Jim ProcterJAL-1551 formatting tree | commitdiff
2015-01-23 Jim ProcterJAL-1286 don't print an exception if a non-gzip stream... tree | commitdiff
2015-01-23 Jim ProcterJAL-1551 crlf changes tree | commitdiff
2015-01-23 Jim ProcterJAL-969 hasHiddenRows is now an interface method tree | commitdiff
2015-01-23 Jim ProcterJAL-969 drop the hiddenColumns flag in favour of checki... tree | commitdiff
2015-01-23 Jim ProcterMerge branch 'develop' into feature_29/JAL-1372_referen... tree | commitdiff
2015-01-23 Jim ProcterJAL-1628 tweak signature of core annotation printer... tree | commitdiff
2015-01-23 Jim ProcterJAL-1551 formatting/imports tree | commitdiff
2015-01-23 Jim ProcterJAL-1551 JAL-962 formatting and code change ripples... tree | commitdiff
2015-01-23 Charles OfoegbuMerge branch 'features/JAL-1553_improvement-select... tree | commitdiff
2015-01-23 Charles OfoegbuJAL-1553 fixed null pointer exception thrown in SeqCanv... tree | commitdiff
2015-01-23 Jim ProcterJAL-1551 source code formatting tree | commitdiff
2015-01-23 Jim ProcterJAL-969 javadoc and mark interface overrides for clarity tree | commitdiff
2015-01-23 Jim ProcterJAL-1628 drop getShowAnnotation accessor in favour... tree | commitdiff
2015-01-22 Charles OfoegbuMerge branch 'features/JAL-1553_improvement-select... tree | commitdiff
2015-01-22 Charles OfoegbuJAL-1553 added applet support for the select-column... tree | commitdiff
2015-01-21 Jim ProcterMerge branch 'develop' into feature_29/JAL-1372_referen... tree | commitdiff
2015-01-20 Charles Ofoegbuclean up tree | commitdiff
2015-01-20 Charles Ofoegbuclean up tree | commitdiff
2015-01-20 Charles OfoegbuMerge branch 'features/JAL-1553_improvement-select... tree | commitdiff
2015-01-20 Charles OfoegbuFurther abstractions and clean up tree | commitdiff
2015-01-20 Charles OfoegbuMerge branch 'features/JAL-1553_improvement-select... tree | commitdiff
2015-01-20 Charles Ofoegbubasic house keeping tree | commitdiff
2015-01-20 Charles OfoegbuMerge branch 'features/JAL-1553_improvement-select... tree | commitdiff
2015-01-20 Charles OfoegbuJAL-1553 enhancement of column selection by annotation... tree | commitdiff
2015-01-18 Jim ProcterJAL-1372 i18n and tweaking set/unset representative... tree | commitdiff
2015-01-18 Jim ProcterJAL-1628 formatting tree | commitdiff
2015-01-18 Jim ProcterJAL-1628 employ new AnnotationFile reader method to... tree | commitdiff
2015-01-18 Jim ProcterJAL-1628 new entry point for reading annotation files... tree | commitdiff
2015-01-18 Jim ProcterJAL-1628 formatting and javadoc tree | commitdiff
2015-01-18 Jim ProcterJAL-1628 method to hide insertions to current sequence... tree | commitdiff
2015-01-18 Jim ProcterJAL-1628 wrappers for common checks on ColumnSelection tree | commitdiff
2015-01-18 Jim ProcterJAL-1628 ColumnSelection method to hide insertions... tree | commitdiff
2015-01-18 Jim ProcterJAL-1628 new method to get a list of insertions in... tree | commitdiff
2015-01-18 Jim ProcterJAL-1372 JAL-1114 JAL-1628 tidy sequenceI/sequence tree | commitdiff
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