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2014-11-06	gmungoc	JAL-1152 use a proper RadioButton not a faked one	commit \| commitdiff \| tree
2014-11-05	gmungoc	JAL-674 Prefences tweaks incl help documentation for...	commit \| commitdiff \| tree
2014-11-05	gmungoc	JAL-1152 new Structure tab on Preferences for SS derivation...	commit \| commitdiff \| tree
2014-11-04	gmungoc	JAL-1152 help updates for Preferences	commit \| commitdiff \| tree
2014-11-04	gmungoc	JAL-1152 annotation sort algorithm optimisation	commit \| commitdiff \| tree
2014-11-03	gmungoc	Merge branch 'features/JAL-1152annotationSorting' of...	commit \| commitdiff \| tree
2014-11-03	gmungoc	JAL-1152 annotation sorting preferences and help documentation	commit \| commitdiff \| tree
2014-10-31	gmungoc	JAL-1152 bug fix for 'no sort' case + tests for autocalc...	commit \| commitdiff \| tree
2014-10-31	gmungoc	JAL-1152 menu tweaks plus new option to put Autocalc...	commit \| commitdiff \| tree
2014-10-30	gmungoc	JAL-1152 with sticky annotation sort order that updates...	commit \| commitdiff \| tree
2014-10-30	gmungoc	JAL-1152 prototype of new Annotations menu with sort...	commit \| commitdiff \| tree
2014-10-28	gmungoc	Merge branch 'develop' of https://source.jalview.org...	commit \| commitdiff \| tree
2014-10-28	gmungoc	JAL-1264 refactor to add menu options to _both_ sequence...	commit \| commitdiff \| tree
2014-10-23	gmungoc	JAL-1264 new unit tests	commit \| commitdiff \| tree
2014-10-23	gmungoc	JAL-1264 further refactoring and tests	commit \| commitdiff \| tree
2014-10-22	gmungoc	JAL-1304 repositioned tab to correct example	commit \| commitdiff \| tree
2014-10-14	gmungoc	JAL-1551 CRLF handling	commit \| commitdiff \| tree
2014-10-13	gmungoc	JAL-1264 unneeded setup removed	commit \| commitdiff \| tree
2014-10-13	gmungoc	JAL-1264 unit test corrected	commit \| commitdiff \| tree
2014-10-12	gmungoc	JAL-1544 SEQENCE -> SEQUENCE	commit \| commitdiff \| tree
2014-10-12	gmungoc	JAL-1264 help updates for show/hide annotations on	commit \| commitdiff \| tree
2014-10-10	gmungoc	JAL-1551 project-specific settings	commit \| commitdiff \| tree
2014-10-10	gmungoc	JAL-1551 proposed project settings for code cleanup...	commit \| commitdiff \| tree
2014-10-10	gmungoc	JAL-1264 unit tests	commit \| commitdiff \| tree
2014-10-10	gmungoc	Suppressed test that needs user interaction to allow...	commit \| commitdiff \| tree
2014-10-10	gmungoc	JAL-1551 CRLF handling	commit \| commitdiff \| tree
2014-10-10	gmungoc	JAL-1264 show/hide annotations, plus merged changes	commit \| commitdiff \| tree
2014-10-10	gmungoc	JAL-1481 wrap tooltip in html	commit \| commitdiff \| tree
2014-10-10	gmungoc	JAL-1264 added getAlignmentAnnotations(calcId, label)	commit \| commitdiff \| tree
2014-10-10	gmungoc	JAL-1264 reverted (removed added method)	commit \| commitdiff \| tree
2014-10-08	gmungoc	Merge branch 'Release_2_8_2_Branch' into	commit \| commitdiff \| tree
2014-10-07	gmungoc	JAL-1264 wip	commit \| commitdiff \| tree
2014-10-07	gmungoc	JAL-1554 handle left-then-right click on sequence id	commit \| commitdiff \| tree
2014-10-03	gmungoc	JAL-1264 javadoc update	commit \| commitdiff \| tree
2014-10-03	gmungoc	JAL-1264 show/hide annotations; JAL-1481 Find tooltip	commit \| commitdiff \| tree
2014-10-03	gmungoc	JAL-1506 delete all warning; JAL-1264 show/hide annotations	commit \| commitdiff \| tree
2014-10-03	gmungoc	JAL-1264 refactored show/hide annotation types including...	commit \| commitdiff \| tree
2014-10-03	gmungoc	JAL-1481 search expression validation	commit \| commitdiff \| tree
2014-10-03	gmungoc	JAL-1506 correct exit on close align frame	commit \| commitdiff \| tree
2014-10-03	gmungoc	JAL-914 don't open help window twice	commit \| commitdiff \| tree
2014-10-03	gmungoc	JAL-1264 show/hide annotations, JAL-1481 search validation...	commit \| commitdiff \| tree
2014-09-25	gmungoc	JAL-1264 tidy up use of MouseListener for showHideAnnotations	commit \| commitdiff \| tree
2014-09-25	gmungoc	JAL-1264 alternative (popup menu) way to show/hide...	commit \| commitdiff \| tree
2014-09-24	gmungoc	JAL-1264 further refactoring of panel + unit tests	commit \| commitdiff \| tree
2014-09-23	gmungoc	JAL-1264 first cut of panel for annotation show/hide...	commit \| commitdiff \| tree
2014-09-18	gmungoc	Merge branch 'JAL-1360_Branch' into Release_2_8_2_Branch	commit \| commitdiff \| tree
2014-09-18	gmungoc	Merge branch 'Release_2_8_2_Branch' of https://source...	commit \| commitdiff \| tree
2014-09-18	gmungoc	JAL-1360 tweaks to match help page conventions, size...	commit \| commitdiff \| tree
2014-09-18	gmungoc	JAL-1360 consistent (bold) help page headings	commit \| commitdiff \| tree
2014-09-18	gmungoc	JAL-1360 Javadoc, Vector replaced with ArrayList, code...	commit \| commitdiff \| tree
2014-09-18	gmungoc	JAL-1360 Javadoc/JUnit	commit \| commitdiff \| tree
2014-09-18	gmungoc	JAL-1360 refactored utility method to ColorUtils class	commit \| commitdiff \| tree
2014-09-18	gmungoc	JAL-1544 it's --> its	commit \| commitdiff \| tree
2014-09-17	gmungoc	JAL-1360 updates to online help for user define colour...	commit \| commitdiff \| tree
2014-09-17	gmungoc	Correct colour for text when colour set	commit \| commitdiff \| tree
2014-09-17	gmungoc	JAL-1360 refactored for consistent lighter/darker for	commit \| commitdiff \| tree
2014-09-17	gmungoc	JAL-1360 workaround for user defined colours display...	commit \| commitdiff \| tree
2014-09-15	gmungoc	JAL-1542 script to show aligned positions of selected...	commit \| commitdiff \| tree
2014-09-12	gmungoc	JAL-1516 handle null annotations	commit \| commitdiff \| tree

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