| 2005-11-29 |
amwaterhouse | Save features and pdbids in jar file
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commit | commitdiff | tree |
| 2005-11-28 |
amwaterhouse | new Implementation for getting colour quickly
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commit | commitdiff | tree |
| 2005-11-28 |
amwaterhouse | Correction for feature rendering
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commit | commitdiff | tree |
| 2005-11-28 |
amwaterhouse | Mapping now performed in PDBChain
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commit | commitdiff | tree |
| 2005-11-28 |
amwaterhouse | wrapped alignment 1 larger
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commit | commitdiff | tree |
| 2005-11-28 |
amwaterhouse | Mapping for alignment added to residue
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commit | commitdiff | tree |
| 2005-11-25 |
amwaterhouse | Must follow alignmentPosition
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commit | commitdiff | tree |
| 2005-11-25 |
amwaterhouse | Comment out test lines
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commit | commitdiff | tree |
| 2005-11-25 |
amwaterhouse | Dont request focus
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commit | commitdiff | tree |
| 2005-11-25 |
amwaterhouse | -1 adjust
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commit | commitdiff | tree |
| 2005-11-25 |
amwaterhouse | Read in Hetatms, allow for models, highlight in canvas
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commit | commitdiff | tree |
| 2005-11-25 |
amwaterhouse | Correct mapping for pdb file
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commit | commitdiff | tree |
| 2005-11-25 |
amwaterhouse | Spinner images
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commit | commitdiff | tree |
| 2005-11-24 |
amwaterhouse | Don't parse input id, leave it as it is
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commit | commitdiff | tree |
| 2005-11-24 |
amwaterhouse | New EBI WS implementation
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commit | commitdiff | tree |
| 2005-11-24 |
amwaterhouse | New WSWUBlast Client files
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commit | commitdiff | tree |
| 2005-11-18 |
amwaterhouse | Add PDB accession to new sequence
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commit | commitdiff | tree |
| 2005-11-18 |
amwaterhouse | Allow single line BLC files
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commit | commitdiff | tree |
| 2005-11-18 |
amwaterhouse | Use PDB column format
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commit | commitdiff | tree |
| 2005-11-18 |
amwaterhouse | Allow for 1 line BLC files
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commit | commitdiff | tree |
| 2005-11-18 |
amwaterhouse | Parse name from last index of /
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commit | commitdiff | tree |
| 2005-11-18 |
amwaterhouse | Use full name in dataset creation
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commit | commitdiff | tree |
| 2005-11-18 |
amwaterhouse | Show error message outside thread loop
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commit | commitdiff | tree |
| 2005-11-17 |
amwaterhouse | Hidden tabs and vamsas refs for beta release
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commit | commitdiff | tree |
| 2005-11-17 |
amwaterhouse | Initial col is light gray
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commit | commitdiff | tree |
| 2005-11-17 |
amwaterhouse | Graphics must be set from nullFrame
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commit | commitdiff | tree |
| 2005-11-17 |
amwaterhouse | No more isOverview
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commit | commitdiff | tree |
| 2005-11-17 |
amwaterhouse | If overview is visible, update it
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commit | commitdiff | tree |
| 2005-11-17 |
amwaterhouse | no more show translation
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commit | commitdiff | tree |
| 2005-11-17 |
amwaterhouse | Hide Tab settings for build
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commit | commitdiff | tree |
| 2005-11-17 |
amwaterhouse | Use setRGB rather than color, fillrect
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commit | commitdiff | tree |
| 2005-11-17 |
amwaterhouse | Move start and end before parsing name
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commit | commitdiff | tree |
| 2005-11-17 |
amwaterhouse | Hide vamsas settings for build
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commit | commitdiff | tree |
| 2005-11-17 |
amwaterhouse | Now outputs features and groups, and wrapped alignment...
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commit | commitdiff | tree |
| 2005-11-17 |
amwaterhouse | Optimized Overview
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commit | commitdiff | tree |
| 2005-11-17 |
amwaterhouse | Use stringbuffer, not string+
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commit | commitdiff | tree |
| 2005-11-17 |
amwaterhouse | Remove system.out
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commit | commitdiff | tree |
| 2005-11-16 |
amwaterhouse | Highlight doesnt use offset
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commit | commitdiff | tree |
| 2005-11-16 |
amwaterhouse | Don't initialise a char in findIndex
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commit | commitdiff | tree |
| 2005-11-16 |
amwaterhouse | Don't set chain colours in hashtable
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commit | commitdiff | tree |
| 2005-11-16 |
amwaterhouse | Highlight from alignment
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commit | commitdiff | tree |
| 2005-11-16 |
amwaterhouse | No more myAtom, Highlight from alignment
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commit | commitdiff | tree |
| 2005-11-16 |
amwaterhouse | no need for myAtom
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commit | commitdiff | tree |
| 2005-11-16 |
amwaterhouse | Parsing updates
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commit | commitdiff | tree |
| 2005-11-16 |
amwaterhouse | Not used
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commit | commitdiff | tree |
| 2005-11-15 |
amwaterhouse | Keep all public methods
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commit | commitdiff | tree |
| 2005-11-15 |
amwaterhouse | No radio buttons in applet
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commit | commitdiff | tree |
| 2005-11-15 |
amwaterhouse | Dont use this yet
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commit | commitdiff | tree |
| 2005-11-15 |
amwaterhouse | Dont use myGraphics
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commit | commitdiff | tree |
| 2005-11-15 |
amwaterhouse | Removed
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commit | commitdiff | tree |
| 2005-11-15 |
amwaterhouse | Graphical bits moved into files to save jar size
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commit | commitdiff | tree |
| 2005-11-15 |
amwaterhouse | Removed to reduce jar size
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commit | commitdiff | tree |
| 2005-11-14 |
amwaterhouse | Modifications for Applet PDB viewer
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commit | commitdiff | tree |
| 2005-11-14 |
amwaterhouse | Add getAlignment function
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commit | commitdiff | tree |
| 2005-11-14 |
amwaterhouse | Modifications for Applet PDB
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commit | commitdiff | tree |
| 2005-11-14 |
amwaterhouse | Fix bug where all chains are called A
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commit | commitdiff | tree |
| 2005-11-14 |
amwaterhouse | Applet PDB viewer
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commit | commitdiff | tree |
| 2005-11-14 |
amwaterhouse | Catch exceptions
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commit | commitdiff | tree |
| 2005-11-14 |
amwaterhouse | Use shortname
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commit | commitdiff | tree |
| 2005-11-14 |
amwaterhouse | getShortName
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commit | commitdiff | tree |
| 2005-11-14 |
amwaterhouse | findByShortName
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commit | commitdiff | tree |
| 2005-11-14 |
amwaterhouse | Dont add sequence group at the moment
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commit | commitdiff | tree |
| 2005-11-11 |
amwaterhouse | No new PDBViewer
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commit | commitdiff | tree |
| 2005-11-11 |
amwaterhouse | Last chance, is the sequence without id?
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commit | commitdiff | tree |
| 2005-11-11 |
amwaterhouse | SequenceFetcher new class
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commit | commitdiff | tree |
| 2005-11-11 |
amwaterhouse | AddPdbEntry added
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commit | commitdiff | tree |
| 2005-11-11 |
amwaterhouse | PNG and EPS in ImageMaker
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commit | commitdiff | tree |
| 2005-11-10 |
amwaterhouse | Allow featuresettings to be enabled on load
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commit | commitdiff | tree |
| 2005-11-10 |
amwaterhouse | Add mousewheel listener
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commit | commitdiff | tree |
| 2005-11-10 |
amwaterhouse | REmove system.out
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commit | commitdiff | tree |
| 2005-11-10 |
amwaterhouse | AlignSeq takes printstream as arg
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commit | commitdiff | tree |
| 2005-11-10 |
amwaterhouse | Add mapping details to stringbuffer
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commit | commitdiff | tree |
| 2005-11-10 |
amwaterhouse | OnlyAddPDBEntries
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commit | commitdiff | tree |
| 2005-11-10 |
amwaterhouse | Set PDBViewer
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commit | commitdiff | tree |
| 2005-11-10 |
amwaterhouse | Use Antialiasing
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commit | commitdiff | tree |
| 2005-11-10 |
amwaterhouse | PDB implementation updated
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commit | commitdiff | tree |
| 2005-11-10 |
amwaterhouse | If selectionGroup is null, return
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commit | commitdiff | tree |
| 2005-11-10 |
amwaterhouse | Return accurate RGB for transparent residues
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commit | commitdiff | tree |
| 2005-11-10 |
amwaterhouse | Make cancelled public variable
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commit | commitdiff | tree |
| 2005-11-10 |
amwaterhouse | getDbRef
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commit | commitdiff | tree |
| 2005-11-10 |
amwaterhouse | Get and set PDBEntrys
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commit | commitdiff | tree |
| 2005-11-10 |
amwaterhouse | PDB is now PDBEntry
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commit | commitdiff | tree |
| 2005-11-10 |
amwaterhouse | Use StringBUffer instead of String
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commit | commitdiff | tree |
| 2005-11-10 |
amwaterhouse | Colour PDB by sequence
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commit | commitdiff | tree |
| 2005-11-10 |
amwaterhouse | PDM mapping
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commit | commitdiff | tree |
| 2005-11-10 |
amwaterhouse | Rot Canvas replaced with PDBViewer
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commit | commitdiff | tree |
| 2005-11-10 |
amwaterhouse | Mapping to PDB added
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commit | commitdiff | tree |
| 2005-11-08 |
amwaterhouse | jalview mapping
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commit | commitdiff | tree |
| 2005-11-08 |
amwaterhouse | Preliminary storeJalview
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commit | commitdiff | tree |
| 2005-11-08 |
amwaterhouse | getVersion added for Castor mapping
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commit | commitdiff | tree |
| 2005-11-04 |
amwaterhouse | Id parsing moved to Sequence
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commit | commitdiff | tree |
| 2005-11-04 |
amwaterhouse | REmove system.out
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commit | commitdiff | tree |
| 2005-11-04 |
amwaterhouse | Show full id
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commit | commitdiff | tree |
| 2005-11-04 |
amwaterhouse | Display full id in trees
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commit | commitdiff | tree |
| 2005-11-04 |
amwaterhouse | Use visible id for sorting
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commit | commitdiff | tree |
| 2005-11-02 |
amwaterhouse | Load and save Feature Colour Settings
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commit | commitdiff | tree |
| 2005-11-02 |
amwaterhouse | Java 1.5 bug note
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commit | commitdiff | tree |
| 2005-11-02 |
amwaterhouse | Allow residue prefix to dataset
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commit | commitdiff | tree |
| 2005-11-02 |
amwaterhouse | Only add first Id to suggestedIds
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commit | commitdiff | tree |
| 2005-11-02 |
amwaterhouse | Add jvsuffix and dbref to menu
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commit | commitdiff | tree |
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