| 2015-04-01 |
gmungoc | JAL-845 fixed start/end range of a mapped SequenceGroup
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commit | commitdiff | tree |
| 2015-04-01 |
gmungoc | JAL-1264 reinstate Show annotations menu item
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commit | commitdiff | tree |
| 2015-03-30 |
gmungoc | JAL-1264 remove broken applet build dependencies
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commit | commitdiff | tree |
| 2015-03-30 |
gmungoc | JAL-1270 fall back on compbio if no localhost:8080...
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commit | commitdiff | tree |
| 2015-03-30 |
gmungoc | JAL-1596 refactoring to allow unit tests to start and...
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commit | commitdiff | tree |
| 2015-03-30 |
gmungoc | JAL-1270 Cache.logger initialisation added
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commit | commitdiff | tree |
| 2015-03-26 |
gmungoc | Merge develop to Release_2_8_3_Branch
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commit | commitdiff | tree |
| 2015-03-26 |
gmungoc | JAL-1688 compiler warnings removed
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commit | commitdiff | tree |
| 2015-03-26 |
gmungoc | JAL-1665 getSequenceFeatures; Desktop.getAlignFrames...
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commit | commitdiff | tree |
| 2015-03-25 |
gmungoc | JAL-1270 System.exit(0) changed to fail() so as not...
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commit | commitdiff | tree |
| 2015-02-19 |
gmungoc | JAL-1665 refactored Sequence.getSequenceFeatures
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commit | commitdiff | tree |
| 2015-01-27 |
gmungoc | JAL-1588 new class renamed
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commit | commitdiff | tree |
| 2015-01-26 |
gmungoc | Merge branch 'features/JAL-1588saveChimeraSession'...
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commit | commitdiff | tree |
| 2015-01-26 |
gmungoc | JAL-1588 restoring saved Chimera session(s)
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commit | commitdiff | tree |
| 2015-01-23 |
gmungoc | JAL-1588 first working (?) restore of Chimera session...
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commit | commitdiff | tree |
| 2015-01-14 |
gmungoc | JAL-1629 .jar option removed from Alignment File Save...
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commit | commitdiff | tree |
| 2015-01-09 |
gmungoc | JAL-1588 check Chimera session file still exists
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commit | commitdiff | tree |
| 2015-01-08 |
gmungoc | JAL-1588 part work save/restore of Chimera session
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commit | commitdiff | tree |
| 2015-01-07 |
gmungoc | JAL-1551 formatting applied
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commit | commitdiff | tree |
| 2015-01-07 |
gmungoc | JAL-1588 refactoring to StructureViewerBase and related
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commit | commitdiff | tree |
| 2015-01-06 |
gmungoc | JAL-1588 refactoring prior to 'save Chimera project'
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commit | commitdiff | tree |
| 2014-12-28 |
gmungoc | Merge branch 'features/JAL-1596ChimeraREST' into develop
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commit | commitdiff | tree |
| 2014-12-14 |
Mungo Carstairs | JAL-1596 set HTTP 1.1 in HttpClient
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commit | commitdiff | tree |
| 2014-12-09 |
gmungoc | JAL-1616 loading of datasets from XML patched
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commit | commitdiff | tree |
| 2014-12-09 |
gmungoc | JAL-1616 loading of datasets from XML patched
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commit | commitdiff | tree |
| 2014-12-05 |
gmungoc | JAL-1614 flag 'protein' removed
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commit | commitdiff | tree |
| 2014-12-05 |
gmungoc | JAL-1614 flag 'protein' removed
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commit | commitdiff | tree |
| 2014-12-05 |
gmungoc | JAL-1609 refactored colour by sequence command, now...
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commit | commitdiff | tree |
| 2014-12-05 |
gmungoc | Merge branch 'Release_2_8_2_Branch' of local repository...
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commit | commitdiff | tree |
| 2014-12-03 |
gmungoc | Merge branch 'Release_2_8_2_Branch' of https://source...
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commit | commitdiff | tree |
| 2014-12-03 |
gmungoc | JAL-1609 wip on Chimera colour by sequence
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commit | commitdiff | tree |
| 2014-12-01 |
gmungoc | JAL-429 Phylip added to help page
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commit | commitdiff | tree |
| 2014-12-01 |
gmungoc | JAL-1544 typos/formatting in help (and Phylip added)
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commit | commitdiff | tree |
| 2014-11-28 |
gmungoc | JAL-1610 check reference annotations against alignment...
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commit | commitdiff | tree |
| 2014-11-28 |
gmungoc | JAL-1596 first REST interface coded
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commit | commitdiff | tree |
| 2014-11-27 |
gmungoc | JAL-1603 if Chimera selected in Preferences, warn if...
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commit | commitdiff | tree |
| 2014-11-27 |
gmungoc | Merge branch 'Release_2_8_2_Branch' of https://source...
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commit | commitdiff | tree |
| 2014-11-27 |
gmungoc | Merge branch 'Release_2_8_2_Branch' of https://source...
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commit | commitdiff | tree |
| 2014-11-26 |
gmungoc | JAL-1528 NullPointer check / more informative PDB fetch...
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commit | commitdiff | tree |
| 2014-11-25 |
gmungoc | JFAL-1594 fix Undo bug; enum EditCommand.Action; basic...
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commit | commitdiff | tree |
| 2014-11-21 |
gmungoc | JAL-1528 found and readded Colour by Chain ('rainbow...
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commit | commitdiff | tree |
| 2014-11-21 |
gmungoc | Merge branch 'Release_2_8_2_Branch' of https://source...
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commit | commitdiff | tree |
| 2014-11-19 |
gmungoc | JAL-1342 new command-line parameter -jabaws <URL>
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commit | commitdiff | tree |
| 2014-11-18 |
gmungoc | JAL-1349 rebuild Web Service menu after add/delete...
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commit | commitdiff | tree |
| 2014-11-18 |
gmungoc | JAL-1582 removing finalize() as may have unexpected...
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commit | commitdiff | tree |
| 2014-11-18 |
gmungoc | JAL-1582 quicker tooltip on service presets (and code...
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commit | commitdiff | tree |
| 2014-11-18 |
gmungoc | JAL-1349 refresh menu presets after 'create' new
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commit | commitdiff | tree |
| 2014-11-18 |
gmungoc | JAL-1580 Chimera path tooltip, removed focusListener
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commit | commitdiff | tree |
| 2014-11-18 |
gmungoc | Merge branch 'Release_2_8_2_Branch' of https://source...
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commit | commitdiff | tree |
| 2014-11-17 |
gmungoc | JAL-1573 unit test added to verify Help target enum...
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commit | commitdiff | tree |
| 2014-11-17 |
gmungoc | JAL-1581 Tooltip slimmed down, Help button added on...
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commit | commitdiff | tree |
| 2014-11-17 |
gmungoc | JAL-1293 hide/show sequence annotations with hide/reveal...
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commit | commitdiff | tree |
| 2014-11-17 |
gmungoc | JAL-1586 chimera file chooser added, validate on OK...
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commit | commitdiff | tree |
| 2014-11-17 |
gmungoc | JAL-1580 size parameters dialog to height of Desktop
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commit | commitdiff | tree |
| 2014-11-17 |
gmungoc | JAL-1528 Chimera Help doc + fixes to setting colours
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commit | commitdiff | tree |
| 2014-11-17 |
gmungoc | JAL-1528 new Preference CHIMERA_PATH (Preferences ...
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commit | commitdiff | tree |
| 2014-11-17 |
gmungoc | JAL-1528 Chimera tidy errors, focus after align, close...
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commit | commitdiff | tree |
| 2014-11-17 |
gmungoc | JAL-1528 bug fixes and adjustments to Chimera interface
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commit | commitdiff | tree |
| 2014-11-14 |
gmungoc | Merge branch 'develop' of https://source.jalview.org...
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commit | commitdiff | tree |
| 2014-11-14 |
gmungoc | JAL-1528 Chimera Help doc + fixes to setting colours
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commit | commitdiff | tree |
| 2014-11-13 |
gmungoc | Merge branch 'develop' of https://source.jalview.org...
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commit | commitdiff | tree |
| 2014-11-13 |
gmungoc | merge
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commit | commitdiff | tree |
| 2014-11-13 |
gmungoc | JAL-1528 new Preference CHIMERA_PATH (Preferences ...
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commit | commitdiff | tree |
| 2014-11-13 |
gmungoc | JAL-1528 Chimera tidy errors, focus after align, close...
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commit | commitdiff | tree |
| 2014-11-12 |
gmungoc | JAL-1528 bug fixes and adjustments to Chimera interface
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commit | commitdiff | tree |
| 2014-11-12 |
gmungoc | Merge branch 'develop' of https://source.jalview.org...
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commit | commitdiff | tree |
| 2014-11-11 |
gmungoc | JAL-1527 opening a project saved with JMol should use...
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commit | commitdiff | tree |
| 2014-11-06 |
gmungoc | JAL-1152 use a proper RadioButton not a faked one
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commit | commitdiff | tree |
| 2014-11-05 |
gmungoc | JAL-674 Prefences tweaks incl help documentation for...
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commit | commitdiff | tree |
| 2014-11-05 |
gmungoc | JAL-1152 new Structure tab on Preferences for SS derivation...
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commit | commitdiff | tree |
| 2014-11-04 |
gmungoc | JAL-1152 help updates for Preferences
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commit | commitdiff | tree |
| 2014-11-04 |
gmungoc | JAL-1152 annotation sort algorithm optimisation
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commit | commitdiff | tree |
| 2014-11-03 |
gmungoc | Merge branch 'features/JAL-1152annotationSorting' of...
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commit | commitdiff | tree |
| 2014-11-03 |
gmungoc | JAL-1152 annotation sorting preferences and help documentation
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commit | commitdiff | tree |
| 2014-10-31 |
gmungoc | JAL-1152 bug fix for 'no sort' case + tests for autocalc...
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commit | commitdiff | tree |
| 2014-10-31 |
gmungoc | JAL-1152 menu tweaks plus new option to put Autocalc...
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commit | commitdiff | tree |
| 2014-10-30 |
gmungoc | JAL-1152 with sticky annotation sort order that updates...
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commit | commitdiff | tree |
| 2014-10-30 |
gmungoc | JAL-1152 prototype of new Annotations menu with sort...
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commit | commitdiff | tree |
| 2014-10-28 |
gmungoc | Merge branch 'develop' of https://source.jalview.org...
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commit | commitdiff | tree |
| 2014-10-28 |
gmungoc | JAL-1264 refactor to add menu options to _both_ sequence...
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commit | commitdiff | tree |
| 2014-10-23 |
gmungoc | JAL-1264 new unit tests
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commit | commitdiff | tree |
| 2014-10-23 |
gmungoc | JAL-1264 further refactoring and tests
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commit | commitdiff | tree |
| 2014-10-22 |
gmungoc | JAL-1304 repositioned tab to correct example
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commit | commitdiff | tree |
| 2014-10-14 |
gmungoc | JAL-1551 CRLF handling
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commit | commitdiff | tree |
| 2014-10-13 |
gmungoc | JAL-1264 unneeded setup removed
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commit | commitdiff | tree |
| 2014-10-13 |
gmungoc | JAL-1264 unit test corrected
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commit | commitdiff | tree |
| 2014-10-12 |
gmungoc | JAL-1544 SEQENCE -> SEQUENCE
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commit | commitdiff | tree |
| 2014-10-12 |
gmungoc | JAL-1264 help updates for show/hide annotations on
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commit | commitdiff | tree |
| 2014-10-10 |
gmungoc | JAL-1551 project-specific settings
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commit | commitdiff | tree |
| 2014-10-10 |
gmungoc | JAL-1551 proposed project settings for code cleanup...
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commit | commitdiff | tree |
| 2014-10-10 |
gmungoc | JAL-1264 unit tests
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commit | commitdiff | tree |
| 2014-10-10 |
gmungoc | Suppressed test that needs user interaction to allow...
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commit | commitdiff | tree |
| 2014-10-10 |
gmungoc | JAL-1551 CRLF handling
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commit | commitdiff | tree |
| 2014-10-10 |
gmungoc | JAL-1264 show/hide annotations, plus merged changes
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commit | commitdiff | tree |
| 2014-10-10 |
gmungoc | JAL-1481 wrap tooltip in html
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commit | commitdiff | tree |
| 2014-10-10 |
gmungoc | JAL-1264 added getAlignmentAnnotations(calcId, label)
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commit | commitdiff | tree |
| 2014-10-10 |
gmungoc | JAL-1264 reverted (removed added method)
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commit | commitdiff | tree |
| 2014-10-08 |
gmungoc | Merge branch 'Release_2_8_2_Branch' into
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commit | commitdiff | tree |
| 2014-10-07 |
gmungoc | JAL-1264 wip
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commit | commitdiff | tree |
| 2014-10-07 |
gmungoc | JAL-1554 handle left-then-right click on sequence id
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commit | commitdiff | tree |
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