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Merge branch 'develop' into blocker/JAL-3611_space_character_in_jalview_install_path
2020-10-15 Ben SoaresMerge branch 'develop' into blocker/JAL-3611_space_character...
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2020-09-28 Ben SoaresJAL-3753 ensure correct dependencies for shadowJar...
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2020-09-28 Ben SoaresMerge branch 'develop' into bug/JAL-3753_resources_duplicate...
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2020-09-25 Ben SoaresJAL-3577 Removed default JALVIEW_VERSION from gradle...
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2020-09-24 Ben SoaresJAL-3577 Quick fix adding quotation marks for findProperty...
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2020-09-23 Ben SoaresMerge branch 'develop' into bug/JAL-3753_resources_duplicate...
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2020-09-23 Ben SoaresJAL-3477 Added 10k leeway to amount of memory reserved...
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2020-09-23 Ben SoaresJAL-3753 Resources seen in tests and appropriate filters...
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2020-09-20 Ben SoaresJAL-3753 put resources in gradle run and test path
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2020-09-18 Ben SoaresJAL-3753 JAL-3754 first rejig
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2020-09-14 Ben SoaresMerge branch 'develop' of https://source.jalview.org...
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2020-09-14 Ben SoaresJAL-3718 force re-initialise of getdown.txt file when...
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2020-09-14 Ben SoaresJAL-3718 force re-initialise of getdown.txt file when...
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2020-09-14 Ben SoaresMerge branch 'feature/JAL-3615gzipXfam' into develop
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2020-09-14 Ben SoaresJAL-3609 HiDPI scale setting done via system prop in...
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2020-09-11 Ben SoaresJAL-3679 Added externally specified plugins dir to...
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2020-09-04 Ben SoaresJAL-3679 Added externally specified plugins dir to...
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2020-09-03 Ben SoaresMerge branch 'develop' of https://source.jalview.org...
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2020-08-20 Ben SoaresJAL-2656 better read of (potential) gzip magic bytes
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2020-08-13 Ben SoaresJAL-3597 Increased heap passmark to <= 45MB and report...
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2020-08-12 Ben SoaresMerge branch 'develop' of https://source.jalview.org...
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2020-08-09 Ben SoaresJAL-3691 Changed .toUppoerCase().startsWith(...) to...
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2020-08-04 Ben SoaresJAL-3477 Improved command line arguments description...
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2020-08-04 Ben SoaresJAL-3477 Added -help text for jvmmempc and jvmmemmax...
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2020-08-03 Ben SoaresJAL-3477 added help documentation for executable jar...
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2020-07-07 Ben SoaresJAL-3608 Changes from code review CR-JAL-236
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2020-06-04 Ben SoaresJAL-3225 Minor change to building.md for flexmark,...
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2020-06-04 Ben SoaresJAL-3225 Removed dependency on command line pandoc...
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2020-06-02 Ben SoaresJAL-3225 Using Gradle Git-Version plugin to set gitHash...
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2020-06-02 Ben SoaresJAL-3225 some fixes to build.gradle for working in...
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2020-05-27 Ben SoaresJAL-3541 ensure deletion of cloverReportDir
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2020-05-27 Ben SoaresJAL-3541 small fix for clover.xml location expected...
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2020-05-15 Ben SoaresJAL-3541 Fixed report path for build artifacts
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2020-05-14 Ben SoaresJAL-3541 Added mem setting and jvmArgs for cloverReporting
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2020-05-14 Ben SoaresJAL-3541 Individual tests now instrumented and reported...
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2020-05-12 Ben SoaresJAL-3541 Helpers for running tests, and other commands...
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2020-05-12 Ben SoaresJAL-3541 JavaExec tasks for cloverInstr and cloverReport...
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2020-05-04 Ben SoaresJAL-3608 streamlined LaF methods and allow specificying...
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2020-05-03 Ben SoaresJAL-3608 also look at user pref PREFERRED_LAF
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2020-05-01 Ben SoaresJAL-3608 Now reporting the actual LookAndFeel in Java...
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2020-05-01 Ben SoaresJAL-3608 Added java builtin NimbusLookAndFeel option...
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2020-04-30 Ben SoaresJAL-3608 Enforcing MetalLookAndFeel as default on linux...
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2020-04-30 Ben SoaresJAL-3608 Added 'metal' option for laf property
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2020-04-29 Ben SoaresJAL-3611 added quotation marks for appdir argument...
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2020-04-22 Ben SoaresJAL-3608 Added CrossPlatform LaF and made configurable...
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2020-04-21 Ben SoaresJAL-3577 changed default RELEASE dir in build.gradle...
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2020-04-21 Ben SoaresJAL-3577 Added newer install dirs to the deletion list...
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2020-04-21 Ben SoaresJAL-3602 Added configuration for enforced use of UTF...
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2020-04-09 Ben SoaresJAL-3588 Remove Examples folder in windows Program...
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2020-04-07 Ben SoaresJAL-3577 improvement to non-release DMG background...
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2020-04-07 Ben SoaresMerge branch 'task/JAL-3577_Jalview_Test_installers...
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2020-04-07 Ben SoaresJAL-3577 Added DEVELOP DMG styling. Improved TEST-RELEASE...
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2020-04-06 Ben SoaresJAL-3577 Fixed Jalview Programme Group in Windows menu...
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2020-04-06 Ben SoaresJAL-3577 Moved application Categories for freedesktop...
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2020-04-06 Ben SoaresJAL-3577 removed debugging
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2020-04-06 Ben SoaresMerge branch 'task/JAL-3577_Jalview_Test_installers...
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2020-04-06 Ben SoaresJAL-3577 Added existing and new Application IDs for...
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2020-04-06 Ben SoaresJAL-3577 Changed shortName to INTERNAL_ID
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2020-04-05 Ben SoaresJAL-3577 Changed Windows internal ID to a new value...
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2020-04-05 Ben SoaresJAL-3577 Changed Windows internal ID to a new value...
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2020-04-04 Ben SoaresJAL-3577 Added DS_Store for Test release to look like...
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2020-04-03 Ben SoaresJAL-3577 Added a jalviewt scheme ONLY to TEST-RELEASE...
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2020-04-03 Ben SoaresJAL-3577 cleaned up old DMG files. Added NON-RELEASE...
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2020-04-02 Ben SoaresJAL-3577 First attempt at new folder names
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2020-04-02 Ben SoaresJAL-3572 Added getdown Implementation-Version to getdown...
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2020-04-02 Ben SoaresMerge branch 'improvement/JAL-3394_added_categories_to_unix_...
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2020-03-26 Ben SoaresJAL-3225 Also look for local.properties in file named...
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2020-03-26 Ben SoaresJAL-3225 All of .settings now gitignored. org.eclipse...
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2020-03-26 Ben SoaresJAL-3225 All of .settings now gitignored. org.eclipse...
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2020-03-25 Ben SoaresJAL-3248 Added instructions for downloading and configuring...
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2020-03-19 Ben SoaresJAL-3541 increase maxheapsize for test worker process
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2020-03-19 Ben SoaresJAL-3541 tidying build.gradle, delete cloverInstrDir...
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2020-03-19 Ben SoaresJAL-3541 put org.gradle.jvmargs explicitly into gradle...
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2020-03-18 Ben SoaresJAL-3541 merged cleanClover with develop
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2020-03-18 Ben SoaresJAL-3541 perhaps a better clean for clover. fixed
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2020-03-18 Ben SoaresJAL-3541 perhaps a better clean for clover
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2020-03-17 Ben SoaresJAL-3541 rejigged clover tasks very mildly
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2020-03-17 Ben SoaresRevert "JAL-3541 trying out previous cloverReport task"
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2020-03-17 Ben SoaresJAL-3541 trying out previous cloverReport task
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2020-03-12 Ben SoaresMerge commit '3fe5792cc63d53a5ace952bd68d3bb673c97f588...
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2020-03-12 Ben SoaresJAL-3394 updated version if install4j gradle plugin
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2020-03-12 Ben SoaresMerge branch 'develop' into improvement/JAL-3394_added_categ...
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2020-03-09 Ben SoaresJAL-3227 slightly adapted download_jres.sh to make...
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2020-03-09 Ben SoaresJAL-3394 Made Categories line configurable/readable...
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2020-03-06 Ben SoaresJAL-3394 Added Categories=Science;Biology;Java; to...
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2020-03-06 Ben SoaresJAL-3394 getdown jar files had not been re-compiled
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2020-03-06 Ben SoaresJAL-3529 improved regex in Stockholm UNIPROT accession...
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2020-03-04 Ben SoaresJAL-3468 small tidy
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2020-03-04 Ben SoaresJAL-3468 improvement to feature description truncation...
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2020-03-04 Ben SoaresJAL-3468 Fixed tests and added test for max-length...
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2020-03-04 Ben SoaresJAL-3468 Obsessively fixed self-closing <br/> tags
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2020-02-27 Ben SoaresJAL-3543 remove debugging output
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2020-02-27 Ben SoaresMerge branch 'develop' into improvement/JAL-3543_dont_report...
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2020-02-27 Ben SoaresJAL-3543 Conditional reporting of Install4j and Getdown...
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2020-02-19 Ben SoaresMerge branch 'develop' into improvement/JAL-3449_add_install...
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2020-02-19 Ben SoaresJAL-3289 Improved the name of the channel_launch.jvl...
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2020-02-19 Ben SoaresMerge branch 'develop' of https://source.jalview.org...
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2020-02-19 Ben SoaresJAL-3337 Adding .settings/org.eclipse.jdt.core.jalview...
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2020-02-19 Ben SoaresJAL-3449 helper task to perform getdown digest on any dir
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2020-02-19 Ben SoaresJAL-3449 ensuring latest getdown jar files after merge
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