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2009-11-02	jprocter	gracefully cope with non-standard nucleotide or amino...	commit \| commitdiff \| tree
2009-11-02	jprocter	gracefully cope with non-standard nucleotide or amino...	commit \| commitdiff \| tree
2009-10-29	jprocter	add in googleanalytics to install set.	commit \| commitdiff \| tree
2009-10-29	jprocter	fix black background (again)	commit \| commitdiff \| tree
2009-10-29	jprocter	donotobfuscate build property	commit \| commitdiff \| tree
2009-10-29	jprocter	add JGoogleAnalytics webstart resource	commit \| commitdiff \| tree
2009-10-27	jprocter	typo	commit \| commitdiff \| tree
2009-10-27	jprocter	finish privacy statement	commit \| commitdiff \| tree
2009-10-27	jprocter	synchronized documentation between development and...	commit \| commitdiff \| tree
2009-10-27	jprocter	fix null pointer exception in redraw for short sequence...	commit \| commitdiff \| tree
2009-10-14	jprocter	fix from acresso for black bg in inner panel	commit \| commitdiff \| tree
2009-10-13	jprocter	privacy statement and preference settings for controlling...	commit \| commitdiff \| tree
2009-10-13	jprocter	prompt user to enable usage stats	commit \| commitdiff \| tree
2009-10-13	jprocter	added preferences for usage stats, questionnaire check...	commit \| commitdiff \| tree
2009-10-13	jprocter	documented privacy settings, fixed potential unhandled...	commit \| commitdiff \| tree
2009-10-13	jprocter	enact on a boolean configuration option, prompting...	commit \| commitdiff \| tree
2009-10-12	jprocter	ensure id string doesn't get set to the empty string...	commit \| commitdiff \| tree
2009-10-12	jprocter	ensure id string doesn't get set to the empty string	commit \| commitdiff \| tree
2009-10-05	jprocter	immediately show memory usage	commit \| commitdiff \| tree
2009-10-05	jprocter	fix path	commit \| commitdiff \| tree
2009-10-05	jprocter	InstallAnywhere 2009	commit \| commitdiff \| tree
2009-10-05	jprocter	InstallAnywhere 2009 version	commit \| commitdiff \| tree
2009-08-03	jprocter	fix feature creation for selected region beyond end...	commit \| commitdiff \| tree
2009-06-10	jprocter	com.boxysystems.jgogleanalytics is now an optional...	commit \| commitdiff \| tree
2009-06-10	jprocter	help message formatting	commit \| commitdiff \| tree
2009-06-02	jprocter	debug autobuild release branch	commit \| commitdiff \| tree
2009-06-02	jprocter	applied 2009 GPL license	commit \| commitdiff \| tree
2009-06-02	jprocter	updated history and fixed typos	commit \| commitdiff \| tree
2009-06-02	jprocter	cvsignore	commit \| commitdiff \| tree
2009-06-02	jprocter	new bugfix release	commit \| commitdiff \| tree
2009-06-02	jprocter	new jalview paper and prep for release	commit \| commitdiff \| tree
2009-06-02	jprocter	upgrade vamsas client to 0.1 (selections)	commit \| commitdiff \| tree
2009-06-02	jprocter	Google Analytics tracking backport	commit \| commitdiff \| tree
2009-06-02	jprocter	new jalview paper	commit \| commitdiff \| tree
2009-04-14	jprocter	patch to fix occasional arrayoutofbounds exception...	commit \| commitdiff \| tree
2009-04-07	jprocter	documented fix to sequencefetcher for multiple ID retrieval	commit \| commitdiff \| tree
2009-04-07	jprocter	fix to ensure multiple accessions can be fetched for...	commit \| commitdiff \| tree
2008-11-12	jprocter	noting updates to continuous build of 2.4.0	commit \| commitdiff \| tree
2008-11-12	jprocter	rewording and clarification	commit \| commitdiff \| tree
2008-11-04	jprocter	fix for recovery of dna/protein sequence mappings in...	commit \| commitdiff \| tree
2008-11-04	jprocter	bugfix db ref retrieve routine so it removes dead query...	commit \| commitdiff \| tree
2008-11-04	jprocter	implemented embl validation properly	commit \| commitdiff \| tree
2008-11-04	jprocter	application specific validIOformat method	commit \| commitdiff \| tree
2008-11-04	jprocter	bugfix for transfer of user defined colourscheme from...	commit \| commitdiff \| tree
2008-11-04	jprocter	application specific validIOformat method	commit \| commitdiff \| tree
2008-09-24	jprocter	fixed sequence associated annotation reading bug where...	commit \| commitdiff \| tree
2008-09-16	jprocter	added bugfix note for 2.4	commit \| commitdiff \| tree
2008-09-16	jprocter	java 1.1 compatibility	commit \| commitdiff \| tree
2008-09-16	jprocter	fix exception raised when JNet concise files with no...	commit \| commitdiff \| tree
2008-09-09	jprocter	more exclusion of build products	commit \| commitdiff \| tree
2008-09-04	jprocter	ensure all URL links on the features under the residue...	commit \| commitdiff \| tree
2008-09-04	jprocter	quickfix for applet when opening relative URLs from...	commit \| commitdiff \| tree
2008-09-02	jprocter	fix jnlp in help and help address	commit \| commitdiff \| tree
2008-08-29	jprocter	licencing and format applied (eclipse)	commit \| commitdiff \| tree
2008-08-29	jprocter	ignore thumbnails	commit \| commitdiff \| tree
2008-08-29	jprocter	ignore deployment products	commit \| commitdiff \| tree
2008-08-29	jprocter	todo OOM	commit \| commitdiff \| tree
2008-08-29	jprocter	use OOMwarning to warn user when out of Memory occurs	commit \| commitdiff \| tree
2008-08-29	jprocter	always output to stderr for out of memory - (no dependence...	commit \| commitdiff \| tree
2008-08-29	jprocter	OOM warning dialog	commit \| commitdiff \| tree
2008-08-29	jprocter	pass OutOfMemory errors upstream from EBI fetch client	commit \| commitdiff \| tree
2008-08-29	jprocter	sensibly sized example for PFAM source	commit \| commitdiff \| tree
2008-08-28	jprocter	added d martin to authors and fixed faq/discuss message	commit \| commitdiff \| tree
2008-08-28	jprocter	bugfix for Jmol and new classloader reading capability	commit \| commitdiff \| tree
2008-08-28	jprocter	author list and jalview discuss mailing list update...	commit \| commitdiff \| tree
2008-08-28	jprocter	bugfix for applet examples with 1gaq where new classloader...	commit \| commitdiff \| tree
2008-08-28	jprocter	Throw exception for unknown protocols in case of carbon...	commit \| commitdiff \| tree
2008-08-27	jprocter	applied copyright 2008	commit \| commitdiff \| tree
2008-08-27	jprocter	fix vamas homedir link	commit \| commitdiff \| tree
2008-08-27	jprocter	added keystore config properties	commit \| commitdiff \| tree
2008-08-27	jprocter	added Release_2_4_branch	commit \| commitdiff \| tree
2008-08-26	jprocter	update and test release build system	commit \| commitdiff \| tree
2008-08-26	jprocter	2.4 release documentation update menus, service refs...	commit \| commitdiff \| tree
2008-08-26	jprocter	update Jpred3 service referenec	commit \| commitdiff \| tree
2008-08-26	jprocter	allow '\|' to be entered in URL text box and added regex...	commit \| commitdiff \| tree
2008-08-26	jprocter	set title of viewer frame after file has been loaded...	commit \| commitdiff \| tree
2008-08-26	jprocter	future bug fix todo	commit \| commitdiff \| tree
2008-08-26	jprocter	new thread for initting of DBRefFetcher with latest...	commit \| commitdiff \| tree
2008-08-26	jprocter	uses shared singleton from jalview.gui.SequenceFetcher...	commit \| commitdiff \| tree
2008-08-26	jprocter	added singleton access method to retrieve the latest...	commit \| commitdiff \| tree
2008-08-26	jprocter	bugfix todo for the 'edit sequence' command	commit \| commitdiff \| tree
2008-08-26	jprocter	tooltip for fetch db refs and more generic regex for...	commit \| commitdiff \| tree
2008-08-26	jprocter	pdb xrefs added as dbrefs and as PDB file links	commit \| commitdiff \| tree
2008-08-26	jprocter	ensure successive matches to a regex have distinct...	commit \| commitdiff \| tree
2008-08-20	jprocter	Use 0f rather than NaN to specify non-valued annotation...	commit \| commitdiff \| tree
2008-08-20	jprocter	tooltip displays formatted annotation row description...	commit \| commitdiff \| tree
2008-08-19	jprocter	beginning of fix for embl/cds/highlighting IO in https...	commit \| commitdiff \| tree
2008-08-19	jprocter	fix for arrayoutofbounds bug when secondary structure...	commit \| commitdiff \| tree
2008-08-19	jprocter	better check for molecule type when identifying internal...	commit \| commitdiff \| tree
2008-08-19	jprocter	regex links for launching URL from single click on...	commit \| commitdiff \| tree
2008-08-15	jprocter	update text and version checker	commit \| commitdiff \| tree
2008-08-15	jprocter	dialog size on macs	commit \| commitdiff \| tree
2008-08-15	jprocter	check for crossreferences every time the menus are...	commit \| commitdiff \| tree
2008-08-15	jprocter	catch invalid URL link exception properly	commit \| commitdiff \| tree
2008-08-15	jprocter	increase height of dialog	commit \| commitdiff \| tree
2008-08-15	jprocter	allow '\|' in regex for URL links to be recovered from...	commit \| commitdiff \| tree
2008-08-15	jprocter	safer copy constructor	commit \| commitdiff \| tree
2008-08-15	jprocter	xrefs retrieved from Uniprot	commit \| commitdiff \| tree
2008-08-15	jprocter	added castor back onto classpath	commit \| commitdiff \| tree
2008-08-13	jprocter	check for null viewport on dataset recovery	commit \| commitdiff \| tree
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