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2020-06-16	Jim Procter	JAL-3561 JAL-3660 check resolved FileFormatI instances...	commit \| commitdiff \| tree
2020-03-20	Jim Procter	JAL-3561 failing test verifying expected fileformat...	commit \| commitdiff \| tree
2020-03-16	Jim Procter	JAL-3407 JAL-3187 help documentation for virtual features...	commit \| commitdiff \| tree
2020-03-16	Jim Procter	JAL-3407 JAL-3549 explicitly mention the ‘no features...	commit \| commitdiff \| tree
2020-03-16	Jim Procter	JAL-3407 group together ‘virtual feature’ related features...	commit \| commitdiff \| tree
2020-03-16	Jim Procter	Merge branch 'develop' of http://source.jalview.org...	commit \| commitdiff \| tree
2020-03-05	Jim Procter	Merge branch 'improvement/JAL-3543_dont_report_null_versions...	commit \| commitdiff \| tree
2020-03-03	Jim Procter	Merge branch 'groovy/JAL-3547_conservationsequenceexport...	commit \| commitdiff \| tree
2020-03-03	Jim Procter	JAL-3547 groovy script to get the conservation sequence...	commit \| commitdiff \| tree
2020-03-02	Jim Procter	JAL-3407 redact Java 8 incompatible '<>' with anonymous...	commit \| commitdiff \| tree
2020-02-27	Jim Procter	Merge branch 'bug/JAL-3412idWidthDiscrepancy' into...	commit \| commitdiff \| tree
2020-02-27	Jim Procter	JAL-3407 release notes for JAL-3412	commit \| commitdiff \| tree
2020-02-27	Jim Procter	JAL-3412 patch for failing test	commit \| commitdiff \| tree
2020-02-27	Jim Procter	Merge branch 'bug/JAL-3412idWidthDiscrepancy' into...	commit \| commitdiff \| tree
2020-02-27	Jim Procter	JAL-3407 JAL-3296 release notes	commit \| commitdiff \| tree
2020-02-27	Jim Procter	Merge branch 'bug/JAL-3296changeStartInvalidateCursor...	commit \| commitdiff \| tree
2020-02-26	Jim Procter	JAL-3477 jalview.jvmmemmax / jvmmemmax maximum value...	commit \| commitdiff \| tree
2020-02-26	Jim Procter	Merge branch 'bug/JAL-3477_memory_max_allocation' into...	commit \| commitdiff \| tree
2020-02-26	Jim Procter	JAL-3407 release notes for JAL-3449 JAL-3393 JAL-3420...	commit \| commitdiff \| tree
2020-02-26	Jim Procter	Merge branch 'improvement/JAL-3449_add_install4j_installer_g...	commit \| commitdiff \| tree
2020-02-26	Jim Procter	JAL-3541 docs for enabling OpenClover coverage reports...	commit \| commitdiff \| tree
2020-02-26	Jim Procter	JAL-3541 removed clover report generation debug flag...	commit \| commitdiff \| tree
2020-02-26	Jim Procter	JAL-3541 configurables for clover report generation...	commit \| commitdiff \| tree
2020-02-25	Jim Procter	JAL-3541 track own jalview.gui.Desktop clover source...	commit \| commitdiff \| tree
2020-02-25	Jim Procter	JAL-3541 2g heap for clover xml and clover html - remove...	commit \| commitdiff \| tree
2020-02-25	Jim Procter	JAL-3541 add verbose and heap setting for HTML Report...	commit \| commitdiff \| tree
2020-02-25	Jim Procter	JAL-3541 use javaExec to run clover tasks	commit \| commitdiff \| tree
2020-02-21	Jim Procter	Merge branch 'bug/JAL-3536getCrossrefTwice' into develop	commit \| commitdiff \| tree
2020-02-21	Jim Procter	JAL-3186 ensure transparency slider position is updated...	commit \| commitdiff \| tree
2020-02-21	Jim Procter	JAL-3186 avoid repainting twice in splitframe	commit \| commitdiff \| tree
2020-02-21	Jim Procter	Merge branch 'features/JAL-3187_uitweaks' into develop	commit \| commitdiff \| tree
2020-02-21	Jim Procter	Merge branch 'develop' into features/JAL-3187_uitweaks	commit \| commitdiff \| tree
2020-02-20	Jim Procter	JAL-3187 nice to have enabling/disabling of apply/cancel...	commit \| commitdiff \| tree
2020-02-20	Jim Procter	JAL-3187 i18n	commit \| commitdiff \| tree
2020-02-20	Jim Procter	JAL-3187 use the recommended way of catching tab selection...	commit \| commitdiff \| tree
2020-02-20	Jim Procter	JAL-3187 individual feature settings panel has revert...	commit \| commitdiff \| tree
2020-02-19	Jim Procter	JAL-3187 i18n for titles in windows/tabs	commit \| commitdiff \| tree
2020-02-19	Jim Procter	JAL-3535 todo re titles for CDS and Protein views in...	commit \| commitdiff \| tree
2020-02-19	Jim Procter	JAL-3187 - tabbed pane is nulled when feature settings...	commit \| commitdiff \| tree
2020-02-19	Jim Procter	JAL-3187 JAL-2764 close feature settings when parent...	commit \| commitdiff \| tree
2020-02-19	Jim Procter	Merge branch 'patch/JAL-3538_fontantialiasingbydefault...	commit \| commitdiff \| tree
2020-02-19	Jim Procter	JAL-3538 JAL-3407 release notes	commit \| commitdiff \| tree
2020-02-19	Jim Procter	JAL-3407 release next week :D	commit \| commitdiff \| tree
2020-02-19	Jim Procter	JAL-3538 anti-aliasing enabled by default	commit \| commitdiff \| tree
2020-02-18	Jim Procter	JAl-3187 JAL-3535 JAL-3534 update open feature settings...	commit \| commitdiff \| tree
2020-02-17	Jim Procter	JAL-3536 failing test and test data	commit \| commitdiff \| tree
2020-02-17	Jim Procter	JAL-3534 patch for simple case (Protein or Nucleotide...	commit \| commitdiff \| tree
2020-02-17	Jim Procter	JAL-3187 fix for JAL-3533 on CDS/Protein tabbed feature...	commit \| commitdiff \| tree
2020-02-17	Jim Procter	JAL-3187 JAL-3533 JAL-3535 set feature settings dialog...	commit \| commitdiff \| tree
2020-02-17	Jim Procter	JAL-3187 better semantics for feature settings closed...	commit \| commitdiff \| tree
2020-02-14	Jim Procter	JAL-3187 alternative solution - gather feature settings...	commit \| commitdiff \| tree
2020-02-14	Jim Procter	JAL-1354 JAL-3528 fix bug from b594d516dac69eebcccdc74393388...	commit \| commitdiff \| tree
2020-02-12	Jim Procter	JAL-3187 applet alignFrame needs new api method	commit \| commitdiff \| tree
2020-02-12	Jim Procter	JAL-3187 first stab at ‘show CDS/Protein Settings’...	commit \| commitdiff \| tree
2020-02-12	Jim Procter	JAL-3187 view controller UI api method to show feature...	commit \| commitdiff \| tree
2020-02-12	Jim Procter	JAL-3187 convenience method on SplitContainerI to retrieve...	commit \| commitdiff \| tree
2020-02-12	Jim Procter	JAL-1354 JAL-3528 report missing keys for MessageManager...	commit \| commitdiff \| tree
2020-02-12	Jim Procter	JAL-3407 release notes for JAL-3121	commit \| commitdiff \| tree
2020-02-11	Jim Procter	JAL-3407 release notes for JAL-3375	commit \| commitdiff \| tree
2020-02-11	Jim Procter	JAL-3376 highlighted in what’s new	commit \| commitdiff \| tree
2020-02-11	Jim Procter	JAL-3407 - JAL-3376 JAL-3377 release notes	commit \| commitdiff \| tree
2020-02-11	Jim Procter	JAL-3407 start of whats new for 2.11.1.0	commit \| commitdiff \| tree
2020-02-11	Jim Procter	JAL-3376 documentation for standard attributes for...	commit \| commitdiff \| tree
2020-02-11	Jim Procter	JAL-3407 release notes (JAL-3386 signoff, new-knowns...	commit \| commitdiff \| tree
2020-02-11	Jim Procter	JAL-3407 JAL-3508 move to 2.11.1.0 point release versioning...	commit \| commitdiff \| tree
2020-02-03	Jim Procter	Merge branch 'task/JAL-3510-update-clover-to-4.4.1...	commit \| commitdiff \| tree
2020-02-03	Jim Procter	JAL-3510 JAL-3153 clover instrumentation for tests	commit \| commitdiff \| tree
2020-01-30	Jim Procter	JAL-3510 bump clover version in gradle build dependencies	commit \| commitdiff \| tree
2020-01-16	Jim Procter	Merge branch 'improvement/JAL-3449_add_install4j_installer_g...	commit \| commitdiff \| tree
2020-01-16	Jim Procter	JAL-3474 release notes	commit \| commitdiff \| tree
2020-01-16	Jim Procter	Merge branch 'improvement/JAL-3474_lots_of_.cvsignore_files...	commit \| commitdiff \| tree
2019-12-12	Jim Procter	JAL-2305 moved failing CrossRef tests to Functional_Failing...	commit \| commitdiff \| tree
2019-12-12	Jim Procter	JAL-3407 update release date for Jalview 2.11.1	commit \| commitdiff \| tree
2019-10-15	Jim Procter	JAL-3407 update release date for Jalview 2.11.1	commit \| commitdiff \| tree
2019-10-11	Jim Procter	Merge branch 'develop' into documentation/JAL-3407_2...	commit \| commitdiff \| tree
2019-08-12	Jim Procter	JAL-2987 release notes	commit \| commitdiff \| tree
2019-08-12	Jim Procter	JAL-3407 update RELEASE and cut new release notes in...	commit \| commitdiff \| tree
2019-08-12	Jim Procter	JAL-3407 JAL-3406 update credits in Jalview 2.11.1	commit \| commitdiff \| tree
2019-07-10	Jim Procter	JAL-3289 bamboo properties for ‘BUILD’ getdown channel...	commit \| commitdiff \| tree
2019-07-10	Jim Procter	JAL-3289 bamboo properties for ‘BUILD’ getdown channel	commit \| commitdiff \| tree
2019-07-04	Jim Procter	JAL-3111 correct JVL appbase for 2.10.5 via getdown	commit \| commitdiff \| tree
2019-07-04	Jim Procter	Merge branch 'task/JAL-3337-rm-lib-update-sourceDist...	commit \| commitdiff \| tree
2019-07-04	Jim Procter	Merge branch 'develop' of http://source.jalview.org...	commit \| commitdiff \| tree
2019-07-04	Jim Procter	JAL-3337 round-and-round the process source files again	commit \| commitdiff \| tree
2019-07-04	Jim Procter	JAL-3337 more includes and excludes	commit \| commitdiff \| tree
2019-07-04	Jim Procter	JAL-3337 remove the old lib directory !	commit \| commitdiff \| tree
2019-07-04	Jim Procter	JAL-3337 rejig the source distribution generation to...	commit \| commitdiff \| tree
2019-07-04	Jim Procter	JAL-3111 replace year in header for help pages and...	commit \| commitdiff \| tree
2019-07-04	Jim Procter	Merge branch 'task/JAL-3348_document_cli_memory_settings_whe...	commit \| commitdiff \| tree
2019-07-04	Jim Procter	JAL-3111 JAL-3348 JVL file documentation	commit \| commitdiff \| tree
2019-07-04	Jim Procter	JAL-3348 revised bsoares memory settings documentation...	commit \| commitdiff \| tree
2019-07-03	Jim Procter	JAL-3111 tidy up lists/indentation for release notes	commit \| commitdiff \| tree
2019-07-03	Jim Procter	JAL-3111 Java 11 only and 'onwards'	commit \| commitdiff \| tree
2019-07-03	Jim Procter	JAL-3111 more whatsNew tweaks	commit \| commitdiff \| tree
2019-07-03	Jim Procter	Merge branch 'task/JAL-3337_gradle_tasks_sourceDist_and_help...	commit \| commitdiff \| tree
2019-07-03	Jim Procter	JAL-3111 more whats new	commit \| commitdiff \| tree
2019-07-03	Jim Procter	Merge branch 'documentation/JAL-2843_featureFiltersFormat...	commit \| commitdiff \| tree
2019-07-02	Jim Procter	JAL-3111 updated what’s new… still more to come !	commit \| commitdiff \| tree
2019-07-02	Jim Procter	JAL-3111 updated privacy statement to remove mention...	commit \| commitdiff \| tree
2019-07-02	Jim Procter	JAL-3111 JAL-3150 revised Jalview archive documentation...	commit \| commitdiff \| tree
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