jalview.git
2019-06-25 Ben SoaresJAL-3322 replaced invokeAndWait(r) with r.run() and...
2019-06-24 Ben SoaresJAL-3322 improve visibility of versioning of launcher
2019-06-22 Ben SoaresJAL-3328 improvement to the EQinvoke code
2019-06-21 Ben SoaresJAL-3328 Made choice of invokeLater or invokeAndWait...
2019-06-21 Ben SoaresJAL-3328 JAL-3300 changed invokeLaters to invokeAndWait...
2019-06-21 Ben SoaresJAL-3328 Getdown version number, changed to 1.8.3-1...
2019-06-21 Ben SoaresJAL-3328 Improved progress bar. Higher-res file icons...
2019-06-21 Ben SoaresJAL-3322 Adding a configurable getdown version number...
2019-06-21 Ben SoaresMerge branch 'develop' into improvement/JAL-3322_getdow...
2019-06-20 Jim ProcterJAL-3111 JAL-2962 JAL-2903 JAL-2986 release notes
2019-06-20 Jim ProcterJAL-3111 last final release date for 2.11.0 !
2019-06-20 Jim ProcterJAL-3111 2.11 improvement JAL-3205 JAL-3203
2019-06-20 Ben SoaresJAL-3322 New progress bar. Added option to report appba...
2019-06-20 Jim ProcterJAL-3111 JAL-1424 release notes
2019-06-20 Jim ProcterJAL-3111 JAL-2816 docs
2019-06-20 Jim ProcterJAL-3111 signed off ’done’ issues in Jira as of now:
2019-06-20 Jim ProcterJAL-3111 JAL-3130 JAL-3235 Java 11 specific known defec...
2019-06-20 Ben SoaresJAL-3323 Improved macOS Old Jalview Uninstaller
2019-06-19 Jalview Development... JAL-3111 codesign the uninstaller again
2019-06-19 Ben SoaresMerge branch 'merge/JAL-3310_and_JAL-3300' into develop
2019-06-19 Ben SoaresJAL-3321 Last pieces of the getdown-launcher.jar upgrad...
2019-06-19 Ben SoaresJAL-3310 Removing i4jruntime.jar from dist. Not needed...
2019-06-19 Jim ProcterMerge branch 'documentation/JAL-3111_release_211' into...
2019-06-19 Jim ProcterJAL-3111 release notes for JAL-3313
2019-06-19 Jim ProcterJAL-3111 formatting

2019-06-19 Jim ProcterMerge branch 'develop' into documentation/JAL-3111_rele...
2019-06-19 Jim ProcterJAL-3111 release notes for JAL-27830 JAL-2876 JAL-2567...
2019-06-19 Ben SoaresJAL-3321 Corrected the badly configured getdown-launche...
2019-06-18 gmungocJAL-3313 don't double count mapped codons
2019-06-18 Jim ProcterMerge branch 'bug/JAL-2830_editManglesDatasetSequence...
2019-06-18 Jim ProcterMerge branch 'documentation/JAL-3111_release_211' into... bug/JAL-2830_editManglesDatasetSequence
2019-06-18 Jim ProcterMerge branch 'bug/JAL-2830_editManglesDatasetSequence...
2019-06-18 Jim ProcterJAL-3111 JAL-2446 mentioned in context with NCList...
2019-06-18 Jim ProcterJAL-3111 JAL-2684 JAL-2360 JAL-2416 release notes
2019-06-18 Ben SoaresMerge branch 'develop' into merge/JAL-3310_and_JAL...
2019-06-18 Jim ProcterMerge branch 'documentation/JAL-3111_release_211' into...
2019-06-18 Jim ProcterJAL-3286 JAL-3111 release notes
2019-06-18 Jim ProcterMerge branch 'develop' into documentation/JAL-3111_rele...
2019-06-18 Jim ProcterMerge branch 'bug/JAL-3286duplicatePdbQuery' into develop
2019-06-18 Jim ProcterJAL-3111 JAL-3003 documentation note
2019-06-18 Jim ProcterJAL-2296 JAL-2295 document in release notes post featur...
2019-06-18 Jim ProcterJAL-3111 - new known issue JAL-3314
2019-06-18 Jim ProcterJAL-3111 release notes for JAL-3073 JAL-3042
2019-06-18 Jim ProcterJAL-3111 JAL-3080 documentation
2019-06-18 Ben SoaresJAL-3310 tidying unecessary files from getdown src...
2019-06-18 Ben SoaresJAL-3312 Fixed SHIFT-CMD/SHIFT-CTRL Key combinations...
2019-06-18 Ben SoaresMerge branch 'develop' of https://source.jalview.org...
2019-06-18 Ben SoaresMerge branch 'develop' into merge/JAL-3310_and_JAL...
2019-06-17 Ben SoaresJAL-3310 JAL-3300 two getdown fixes merged
2019-06-17 Ben SoaresJAL-3310 Remove install4j from getdown-launcher.jar...
2019-06-17 Jim ProcterMerge branch 'documentation/JAL-3111_release_211' into...
2019-06-17 Jim ProcterJAL-3111 rejigged release notes again
2019-06-17 Jim ProcterJAL-2975,JAL-2647,JAL-1767,JAL-2965, JAL-3111 updated...
2019-06-14 Ben SoaresJAL-3295 pre-merged code with JAL-3295 branch which...
2019-06-14 Ben SoaresJAL-3278 A system.out.println turned into a cache.log...
2019-06-14 Ben SoaresJAL-3300 instant Splash screen on getdown
2019-06-14 Ben SoaresJAL-3130 added a bit of gradle support for compiling...
2019-06-14 Jim ProcterMerge branch 'documentation/JAL-3111_release_211' into...
2019-06-14 Jim ProcterJAL-3111 release date now 20th June. more release note...
2019-06-14 Jim ProcterJAL-3111 report build type and commit in stdout from...
2019-06-14 Jim ProcterJAL-3299 JAL-3280 javadoc on BuildDetails bean
2019-06-14 Jim ProcterJAL-3111 report time when Jalview was built (consider...
2019-06-13 Jalview Development... Merge branch 'releases/Release_2_11_Branch' into develop
2019-06-13 Jim ProcterMerge branch 'bug/JAL-3295_CMD_select_not_working_in_se...
2019-06-13 gmungocJAL-3143 recognise lnc_RNA as transcript
2019-06-13 Ben SoaresJAL-3295 Can now compile/run/debug in Eclipse with...
2019-06-12 Ben SoaresJAL-3295 Fixed CMD-select of sequences in alignment...
2019-06-12 Ben SoaresJAL-3299 Fixed gitHash and gitBranch definitions in...
2019-06-11 gmungocJAL-3143 also parse "phase" from JSON response if present
2019-06-11 Ben SoaresMerge branch 'develop' of https://source.jalview.org...
2019-06-11 Ben SoaresJAL-3248 improved pandoc lookup. Now comma-separated...
2019-06-11 gmungocJAL-3111 update release date placeholder
2019-06-11 gmungocJAL-3288 fixes for gain/lose focus
2019-06-10 Ben SoaresJAL-3248 quick fix for build.gradle when pandoc not...
2019-06-10 Ben SoaresJAL-3248 building.html now generated by pandoc 'brew...
2019-06-10 Ben SoaresJAL-3248 added conversion of building.md to building...
2019-06-10 Ben SoaresMerge branch 'develop' into task/JAL-3248_rewritten_bui...
2019-06-10 Ben SoaresMerge branch 'task/JAL-3248_rewritten_building_md_instr...
2019-06-10 Ben SoaresJAL-3248 Building from source documentation in markdown...
2019-06-10 Ben SoaresJAL-3248 Building from source documentation in markdown...
2019-06-07 Ben SoaresJAL-3248 Almost completed building doc
2019-06-07 gmungocMerge branch 'bug/JAL-3288splitFrameMenusJava11' into...
2019-06-07 Ben SoaresJAL-3248 a bit more
2019-06-07 gmungocJAL-3187 Viewport schema attributes for showComplementF...
2019-06-07 gmungocJAL-3251 added optional attributes Sequence.biotype...
2019-06-07 gmungocJAL-2738 use GeneLocus extends DBRefEntry to hold chrom...
2019-06-07 Ben SoaresMerge branch 'develop' into task/JAL-3248_rewritten_bui...
2019-06-07 Ben SoaresJAL-3225 removing slightly misleading rewrite of .class...
2019-06-06 Ben SoaresJAL-3225 Classpath now made in eclipse.classpath.file...
2019-06-05 gmungocJAL-3288 override JInternalFrame.setSelected() to avoid... bug/JAL-3288splitFrameMenusJava11
2019-06-04 gmungocJAL-2386 avoid duplicate pdbids in free text query bug/JAL-3286duplicatePdbQuery
2019-06-04 Ben SoaresJAL-3287 correct local file URI for appbase and getdown...
2019-06-04 Ben SoaresJAL-3287 adjustment to HelpLinksChecker
2019-06-04 Ben SoaresJAL-3287 adjustment to HelpLinksChecker to run in Windo...
2019-06-04 Ben SoaresJAL-3248 small edits
2019-05-31 Ben SoaresJAL-3247 Adjusted Uninstall Old Jalview.app to just...
2019-05-31 Ben SoaresJAL-3248 extra tl;dr
2019-05-30 Ben SoaresJAL-3248 Essential tl;dr :)
2019-05-30 Ben SoaresMerge branch 'develop' into task/JAL-3248_rewritten_bui...
2019-05-29 gmungocJAL-2738 error logging if no ##reference found
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