source.jalview.org Git - jalview.git/shortlog

git://source.jalview.org / jalview.git / shortlog

2005-03-09	amwaterhouse	font chooser added	commit \| commitdiff \| tree \| snapshot
2005-03-09	amwaterhouse	allows deletion of chars, font chooser added	commit \| commitdiff \| tree \| snapshot
2005-03-09	amwaterhouse	allows deletion of chars	commit \| commitdiff \| tree \| snapshot
2005-03-09	amwaterhouse	dont perform blast search at present	commit \| commitdiff \| tree \| snapshot
2005-03-08	amwaterhouse	add lower case residue props	commit \| commitdiff \| tree \| snapshot
2005-03-08	jprocter	fixed interface for PID method.	commit \| commitdiff \| tree \| snapshot
2005-03-08	jprocter	fixed so that alignment percentage ID is used for dista...	commit \| commitdiff \| tree \| snapshot
2005-03-08	jprocter	fixed signing bug (also updated to latest javahelp...	commit \| commitdiff \| tree \| snapshot
2005-03-08	jprocter	more precise methods information in help description.	commit \| commitdiff \| tree \| snapshot
2005-03-08	jprocter	fixed some of the jar/wsdl deployment problems.	commit \| commitdiff \| tree \| snapshot
2005-03-08	jprocter	removed conservation calculation from calculations.	commit \| commitdiff \| tree \| snapshot
2005-03-08	amwaterhouse	Tree fits to window by default	commit \| commitdiff \| tree \| snapshot
2005-03-08	amwaterhouse	getCharwidth directly	commit \| commitdiff \| tree \| snapshot
2005-03-08	amwaterhouse	Dont set paintFlags	commit \| commitdiff \| tree \| snapshot
2005-03-08	amwaterhouse	dont set seqPanel paint flag	commit \| commitdiff \| tree \| snapshot
2005-03-08	amwaterhouse	only set graphics black once at beginning of text	commit \| commitdiff \| tree \| snapshot
2005-03-08	amwaterhouse	dont color gaps in sequence features	commit \| commitdiff \| tree \| snapshot
2005-03-08	amwaterhouse	if resIndex > 19 return color.white	commit \| commitdiff \| tree \| snapshot
2005-03-01	jprocter	Obsolete. Explanation within the conservation coloursch...	commit \| commitdiff \| tree \| snapshot
2005-02-28	jprocter	added uniquify sequence id assertion.	commit \| commitdiff \| tree \| snapshot
2005-02-28	jprocter	partial implementation of JNet server prediction.	commit \| commitdiff \| tree \| snapshot
2005-02-28	jprocter	first stab at a JPredClient.	commit \| commitdiff \| tree \| snapshot
2005-02-23	jprocter	basic jpred concise prediction reader.	commit \| commitdiff \| tree \| snapshot
2005-02-23	jprocter	new resources location.	commit \| commitdiff \| tree \| snapshot
2005-02-23	jprocter	rearranged project structure	commit \| commitdiff \| tree \| snapshot
2005-02-23	jprocter	making Jemboss client more configurable.	commit \| commitdiff \| tree \| snapshot
2005-02-23	jprocter	bug fix for unaligned sequence sets and clustal colours...	commit \| commitdiff \| tree \| snapshot
2005-02-23	jprocter	rearranged project structure	commit \| commitdiff \| tree \| snapshot
2005-02-23	jprocter	new ant build for Jalview.	commit \| commitdiff \| tree \| snapshot
2005-02-22	amwaterhouse	add titles	commit \| commitdiff \| tree \| snapshot
2005-02-22	amwaterhouse	add history for cut and paste	commit \| commitdiff \| tree \| snapshot
2005-02-22	amwaterhouse	updated help files	commit \| commitdiff \| tree \| snapshot
2005-02-21	amwaterhouse	images moved	commit \| commitdiff \| tree \| snapshot
2005-02-21	amwaterhouse	note of user_defined_colours added	commit \| commitdiff \| tree \| snapshot
2005-02-21	amwaterhouse	image moved	commit \| commitdiff \| tree \| snapshot
2005-02-21	amwaterhouse	Sets USER_DEFINED_COLOUR as property	commit \| commitdiff \| tree \| snapshot
2005-02-21	amwaterhouse	images in image folder	commit \| commitdiff \| tree \| snapshot
2005-02-21	amwaterhouse	Updated help pages	commit \| commitdiff \| tree \| snapshot
2005-02-18	amwaterhouse	treepanel is now internalframe, has a menu	commit \| commitdiff \| tree \| snapshot
2005-02-18	amwaterhouse	show sequence features is false by default	commit \| commitdiff \| tree \| snapshot
2005-02-18	amwaterhouse	tree is printable	commit \| commitdiff \| tree \| snapshot
2005-02-18	amwaterhouse	treepanel is now internalframe	commit \| commitdiff \| tree \| snapshot
2005-02-18	amwaterhouse	featuresAdded = false	commit \| commitdiff \| tree \| snapshot
2005-02-16	amwaterhouse	wrap alignment id drawing bug fixed	commit \| commitdiff \| tree \| snapshot
2005-02-16	amwaterhouse	Save as jpg added	commit \| commitdiff \| tree \| snapshot
2005-02-15	amwaterhouse	Fix bug when creating treepanel	commit \| commitdiff \| tree \| snapshot
2005-02-15	amwaterhouse	abovePIDThreshold added to viewport	commit \| commitdiff \| tree \| snapshot
2005-02-15	amwaterhouse	no action if supplied colour isnull	commit \| commitdiff \| tree \| snapshot
2005-02-15	amwaterhouse	catch any pid or conservation related bugs here	commit \| commitdiff \| tree \| snapshot
2005-02-15	amwaterhouse	add applytoallgroups colouring option	commit \| commitdiff \| tree \| snapshot
2005-02-11	amwaterhouse	must add all features even if start and end res are...	commit \| commitdiff \| tree \| snapshot
2005-02-11	amwaterhouse	move sequences up and down	commit \| commitdiff \| tree \| snapshot
2005-02-11	amwaterhouse	add VK_F key, up down	commit \| commitdiff \| tree \| snapshot
2005-02-11	amwaterhouse	end of seq adjustments	commit \| commitdiff \| tree \| snapshot
2005-02-11	amwaterhouse	dont add new seqs to group	commit \| commitdiff \| tree \| snapshot
2005-02-11	amwaterhouse	watch out for end of seq in findposition	commit \| commitdiff \| tree \| snapshot
2005-02-11	amwaterhouse	update start and end res when copying	commit \| commitdiff \| tree \| snapshot
2005-02-11	amwaterhouse	add control a key to select all	commit \| commitdiff \| tree \| snapshot
2005-02-11	amwaterhouse	bug fixed if featureEnd is beyond end of sequence	commit \| commitdiff \| tree \| snapshot
2005-02-10	amwaterhouse	watch end of sequence when asking for (start, end)	commit \| commitdiff \| tree \| snapshot
2005-02-10	amwaterhouse	dont add new sequences to null groups!	commit \| commitdiff \| tree \| snapshot
2005-02-10	amwaterhouse	change of label text	commit \| commitdiff \| tree \| snapshot
2005-02-10	amwaterhouse	cut and paste now in main menu	commit \| commitdiff \| tree \| snapshot
2005-02-10	amwaterhouse	trimmed down	commit \| commitdiff \| tree \| snapshot
2005-02-10	amwaterhouse	Key listener works!!	commit \| commitdiff \| tree \| snapshot
2005-02-10	amwaterhouse	Cut and paste implemented	commit \| commitdiff \| tree \| snapshot
2005-02-10	amwaterhouse	check that we're not off the end of a sequence	commit \| commitdiff \| tree \| snapshot
2005-02-10	amwaterhouse	check that mouse is over sequence if unaligned	commit \| commitdiff \| tree \| snapshot
2005-02-10	amwaterhouse	edit sequence name method	commit \| commitdiff \| tree \| snapshot
2005-02-10	amwaterhouse	remove try catch loop	commit \| commitdiff \| tree \| snapshot
2005-02-10	amwaterhouse	isAligned method added, check before making tree	commit \| commitdiff \| tree \| snapshot
2005-02-10	amwaterhouse	isAligned method added	commit \| commitdiff \| tree \| snapshot
2005-02-10	amwaterhouse	removed	commit \| commitdiff \| tree \| snapshot
2005-02-09	amwaterhouse	Start the thread	commit \| commitdiff \| tree \| snapshot
2005-02-09	amwaterhouse	Display tooltip updated	commit \| commitdiff \| tree \| snapshot
2005-02-09	amwaterhouse	Correct number of ids is drawn	commit \| commitdiff \| tree \| snapshot
2005-02-09	amwaterhouse	Fixed display bugs when feature is off the screen	commit \| commitdiff \| tree \| snapshot
2005-02-09	amwaterhouse	Blasts asynchronously	commit \| commitdiff \| tree \| snapshot
2005-02-08	amwaterhouse	Set property returns key	commit \| commitdiff \| tree \| snapshot
2005-02-08	amwaterhouse	Looks for missing ids using BlastClient	commit \| commitdiff \| tree \| snapshot
2005-02-08	amwaterhouse	new class	commit \| commitdiff \| tree \| snapshot
2005-02-08	jprocter	formatting imports.	commit \| commitdiff \| tree \| snapshot
2005-02-07	amwaterhouse	Properties bug fixed	commit \| commitdiff \| tree \| snapshot
2005-02-07	amwaterhouse	New class	commit \| commitdiff \| tree \| snapshot
2005-02-07	amwaterhouse	Use Cache.getProperty	commit \| commitdiff \| tree \| snapshot
2005-02-07	amwaterhouse	Settooltip for sequence feature	commit \| commitdiff \| tree \| snapshot
2005-02-07	amwaterhouse	load properties on startup	commit \| commitdiff \| tree \| snapshot
2005-02-07	amwaterhouse	Properties added	commit \| commitdiff \| tree \| snapshot
2005-02-07	amwaterhouse	Now displays sequence features	commit \| commitdiff \| tree \| snapshot
2005-02-07	amwaterhouse	New class for fetching sequence features	commit \| commitdiff \| tree \| snapshot
2005-02-04	amwaterhouse	SequenceFeature display added	commit \| commitdiff \| tree \| snapshot
2005-02-02	amwaterhouse	Modified for wrapAlignement	commit \| commitdiff \| tree \| snapshot
2005-02-02	amwaterhouse	Remove test image	commit \| commitdiff \| tree \| snapshot
2005-02-02	amwaterhouse	Modified for wrappingAlignment	commit \| commitdiff \| tree \| snapshot
2005-02-01	amwaterhouse	Apply to all groups method added	commit \| commitdiff \| tree \| snapshot
2005-02-01	amwaterhouse	Update PID or conservationSlider if necessary	commit \| commitdiff \| tree \| snapshot
2005-02-01	amwaterhouse	Bugs in column selection fixed	commit \| commitdiff \| tree \| snapshot
2005-02-01	amwaterhouse	Conservation and PID colouring methods updated, also...	commit \| commitdiff \| tree \| snapshot
2005-02-01	amwaterhouse	Conservation and PID colouring methods updated	commit \| commitdiff \| tree \| snapshot
2005-02-01	amwaterhouse	Secondary panel is hidden for the moment	commit \| commitdiff \| tree \| snapshot
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