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2023-01-30 Ben SoaresJAL-1988 Make sensible choices if only the opening... merge/JAL-1988_JAL-3772+JAL-3416+JAL-4054+JAL-4064 commit | commitdiff | tree | snapshot
2023-01-17 Ben SoaresJAL-3416 No longer needed commit | commitdiff | tree | snapshot
2023-01-17 Ben SoaresMerge branch 'develop' into merge/JAL-1988_JAL-3772... commit | commitdiff | tree | snapshot
2023-01-16 Ben SoaresJAL-3416 More tweaking of FlatLaf. Problem with macOS... commit | commitdiff | tree | snapshot
2023-01-11 Ben SoaresJAL-1988 JAL-3772 Mark the _default_ STARTUP_FILE as... commit | commitdiff | tree | snapshot
2023-01-06 Ben SoaresJAL-3416 More explicit setting of FlatLaf macOS theme commit | commitdiff | tree | snapshot
2023-01-06 Ben SoaresJAL-3416 Upgraded FlatLaf to 3.0 and added macOS theme... commit | commitdiff | tree | snapshot
2023-01-06 Ben SoaresJAL-3416 remove a missed panel titlebar icon in TreePanel commit | commitdiff | tree | snapshot
2023-01-06 Ben SoaresJAL-3416 Fix file permissions on bundled macOS JREs commit | commitdiff | tree | snapshot
2022-11-29 Ben SoaresJAL-4101 Updated Rfam* tests commit | commitdiff | tree | snapshot
2022-11-29 Ben SoaresJAL-4101 Updated DEFAULT_RFAM_BASEURL commit | commitdiff | tree | snapshot
2022-11-16 Ben SoaresMerge branch 'improvement/JAL-3416_default_to_LIVE_DRAG... commit | commitdiff | tree | snapshot
2022-11-16 Ben SoaresJAL-3416 make flatlaf default for linux improvement/JAL-3416_default_to_LIVE_DRAG_MODE_for_flatlaf commit | commitdiff | tree | snapshot
2022-11-09 Ben SoaresJAL-3416 Add necessary logo to non-internal Frames commit | commitdiff | tree | snapshot
2022-11-09 Ben SoaresMerge branch 'improvement/JAL-3416_default_to_LIVE_DRAG... commit | commitdiff | tree | snapshot
2022-11-09 Ben SoaresJAL-3416 Add necessary logo to non-internal Frames commit | commitdiff | tree | snapshot
2022-11-09 Ben SoaresMerge branch 'improvement/JAL-3416_default_to_LIVE_DRAG... commit | commitdiff | tree | snapshot
2022-11-09 Ben SoaresJAL-3416 Remove all JFrame/JInternalFrame icons (set... commit | commitdiff | tree | snapshot
2022-11-09 Ben SoaresMerge branch 'bug/JAL-1988_JAL-3772_improved_quit_handl... commit | commitdiff | tree | snapshot
2022-11-09 Ben SoaresJAL-1988 JAL-3772 Test for FORCE_QUIT whilst saving... bug/JAL-1988_JAL-3772_improved_quit_handling commit | commitdiff | tree | snapshot
2022-11-08 Ben SoaresMerge branch 'bug/JAL-1988_JAL-3772_improved_quit_handl... commit | commitdiff | tree | snapshot
2022-11-08 Ben SoaresJAL-1988 JAL-3776 Formatting JvOptionPane commit | commitdiff | tree | snapshot
2022-11-08 Ben SoaresJAL-1988 JAL-3772 Tests for various quitting scenarios commit | commitdiff | tree | snapshot
2022-11-08 Ben SoaresJAL-1988 JAL-3772 Fixes highlighted by tests commit | commitdiff | tree | snapshot
2022-11-04 Ben SoaresMerge branch 'merge/JAL-4054+JAL-4064' into ben-big... commit | commitdiff | tree | snapshot
2022-11-04 Ben SoaresJAL-3416 Added logoIcon to quit (and potentially other... commit | commitdiff | tree | snapshot
2022-11-04 Ben SoaresJAL-1998 JAL-3772 JAL-3416 Merge conflict resolution... commit | commitdiff | tree | snapshot
2022-11-04 Ben SoaresJAL-4064 JAL-4054 Combined install4j10 template with... improvement/JAL-4064_Addition_of_macOS_AARCH64_native_DMG commit | commitdiff | tree | snapshot
2022-11-04 Ben SoaresJAL-4054 Altered file association templates and generat... commit | commitdiff | tree | snapshot
2022-11-03 Ben SoaresJAL-3416 File Chooser iconified, JvOptionPanes iconifie... commit | commitdiff | tree | snapshot
2022-11-03 Ben SoaresJAL-1988 JAL-3772 Allow other window closing dialogs... commit | commitdiff | tree | snapshot
2022-11-03 Ben SoaresJAL-3416 More JInternalFrame icons commit | commitdiff | tree | snapshot
2022-11-03 Ben SoaresJAL-1988 JAL-3772 Tidying of unspecified Callable decla... commit | commitdiff | tree | snapshot
2022-11-03 Ben SoaresJAL-3416 Start to add JInternalFrame icons (to replace... commit | commitdiff | tree | snapshot
2022-11-02 Ben SoaresJAL-1988 JAL-3772 Moving packages to somewhere more... commit | commitdiff | tree | snapshot
2022-11-01 Ben SoaresJAL-3416 set flatlaf default drag mode to LIVE_DRAG_MODE commit | commitdiff | tree | snapshot
2022-11-01 Ben SoaresJAL-1988 JAL-3772 Change default alignmentviewport... commit | commitdiff | tree | snapshot
2022-11-01 Ben SoaresJAL-4064 tidying build.gradle commit | commitdiff | tree | snapshot
2022-11-01 Ben SoaresJAL-4064 re-added bundled macOS JREs as Filesets, which... commit | commitdiff | tree | snapshot
2022-11-01 Ben SoaresJAL-4064 Cleaned up file sets in install4j template... commit | commitdiff | tree | snapshot
2022-11-01 Ben SoaresJAL-4064 Download JRE/JDKs from Azul if not os/arch... commit | commitdiff | tree | snapshot
2022-10-29 Ben SoaresJAL-1988 JAL-3772 removed a debugging log line commit | commitdiff | tree | snapshot
2022-10-28 Ben SoaresJAL-1988 JAL-3772 Removed 'Wait' button from waitDialog... commit | commitdiff | tree | snapshot
2022-10-28 Ben SoaresJAL-1988 JAL-3772 Fixed wait between waitDialog appeara... commit | commitdiff | tree | snapshot
2022-10-27 Ben SoaresJAL-1988 Allow generic Container object in JvOptionPane... commit | commitdiff | tree | snapshot
2022-10-27 Ben SoaresMerge branch 'develop' into bug/JAL-1988_JAL-3772_impro... commit | commitdiff | tree | snapshot
2022-10-26 Ben SoaresJAL-3416 (and others) increasing number of STDERR lines... commit | commitdiff | tree | snapshot
2022-10-25 Ben SoaresJAL-3772 silly NPE error fixed commit | commitdiff | tree | snapshot
2022-10-25 Ben SoaresJAL-3416 Making FlatLaF default for macs due to a probl... commit | commitdiff | tree | snapshot
2022-10-24 Ben SoaresJAL-1988 JAL-3772 wait timer working first time but... commit | commitdiff | tree | snapshot
2022-10-24 Ben SoaresJAL-1988 JAL-3772 Non-blocking modal dialogs for unsave... commit | commitdiff | tree | snapshot
2022-10-11 Jim ProcterJAL-4065 final fix for 2.11.2.5 - 5pm BST release commit | commitdiff | tree | snapshot
2022-10-11 Jim ProcterJAL-4065 revised to avoid a visit from the apostrophe... commit | commitdiff | tree | snapshot
2022-10-11 Jim ProcterJAL-4073 update tests commit | commitdiff | tree | snapshot
2022-10-11 Jim ProcterMerge branch 'develop' of https://source.jalview.org... commit | commitdiff | tree | snapshot
2022-10-11 Jim ProcterJAL-4073 fix PEBCAK failure commit | commitdiff | tree | snapshot
2022-10-11 Ben SoaresJAL-4014 Changed gecos display names to match labels... commit | commitdiff | tree | snapshot
2022-10-11 Jim ProcterJAL-4065 revised whatsNew to make sense ! commit | commitdiff | tree | snapshot
2022-10-11 Jim ProcterJAL-4065 release 2.11.2.5 date is 11th Oct commit | commitdiff | tree | snapshot
2022-10-07 Jim ProcterJAL-4065 update citations for Pfam and Rfam and added... commit | commitdiff | tree | snapshot
2022-10-07 Jim ProcterJAL-4065 2.11.2.5 release version bump commit | commitdiff | tree | snapshot
2022-10-07 Jim ProcterJAL-4065 release notes and updated release date for... commit | commitdiff | tree | snapshot
2022-10-06 Jim Procterstable url for PFAM retrieval via interpro api :) JAL... commit | commitdiff | tree | snapshot
2022-10-06 Jim ProcterJAL-1551 formatting commit | commitdiff | tree | snapshot
2022-10-06 Jim ProcterJAL-4065 release notes for JAL-4073 JAL-4074 commit | commitdiff | tree | snapshot
2022-10-06 Jim ProcterJAL-4073 Pfam retrieval now works via a template includ... commit | commitdiff | tree | snapshot
2022-10-06 Jim ProcterPatch for JAL-4074 - any content ending in ‘gzip’ recog... commit | commitdiff | tree | snapshot
2022-09-29 Ben SoaresMerge branch 'develop' into bug/JAL-1988_JAL-3772_impro... commit | commitdiff | tree | snapshot
2022-09-26 Ben SoaresJAL-1988 JAL-3772 linked undostack to saved changes... commit | commitdiff | tree | snapshot
2022-09-26 Ben SoaresJAL-1988 better wording for quit dialog commit | commitdiff | tree | snapshot
2022-09-23 Ben SoaresJAL-1988 JAL-3772 Quit confirmation dialog boxes with... commit | commitdiff | tree | snapshot
2022-09-23 Ben SoaresJAL-3676 extra information about jalview_properties... commit | commitdiff | tree | snapshot
2022-09-23 Ben SoaresJAL-1988 property based fake delay whilst saving projec... commit | commitdiff | tree | snapshot
2022-09-15 Jim ProcterJAL-4065 release notes for JAL-4014 and JAL-4063 in... commit | commitdiff | tree | snapshot
2022-09-15 Jim ProcterJAL-4065 - new release notes featuring JAL-3612 fix commit | commitdiff | tree | snapshot
2022-09-14 Jim ProcterMerge branch 'bug/JAL-3612_overviewFeatureOrdering... commit | commitdiff | tree | snapshot
2022-09-02 Ben SoaresJAL-1988 Added a saves in progress check for quit commit | commitdiff | tree | snapshot
2022-08-31 Ben SoaresJAL-1988 added a saveInProgress stack to BackupFiles commit | commitdiff | tree | snapshot
2022-08-23 Ben SoaresJAL-4014 JAL-4063 Added gecos colourScheme names (INFO... commit | commitdiff | tree | snapshot
2022-08-08 Jim ProcterJAL-4046 release on 9th August 2022 commit | commitdiff | tree | snapshot
2022-08-08 Jim ProcterJAL-4046 JAL-3993 imports reformatting commit | commitdiff | tree | snapshot
2022-08-08 Jim ProcterJAL-4046 JAL-3993 patch for 2.11.2.4 release commit | commitdiff | tree | snapshot
2022-08-08 Jim ProcterJAL-4046 release notes for JAL-3991 commit | commitdiff | tree | snapshot
2022-08-08 Jim ProcterMerge branch 'task/JAL-3991_check_actual_JAVA_VERSION_a... commit | commitdiff | tree | snapshot
2022-08-08 Jim ProcterJAL-4046 release notes for JAL-4014 - gecos colourschemes commit | commitdiff | tree | snapshot
2022-08-08 Jim ProcterMerge branch 'improvement/JAL-4014_gecos_colour_schemes... commit | commitdiff | tree | snapshot
2022-08-08 Jim ProcterJAL-4056 documented in release notes for JAL-4043 commit | commitdiff | tree | snapshot
2022-08-08 Jim ProcterMerge branch 'patch/JAL-4036_uniprot_fts_legacy_endpoin... commit | commitdiff | tree | snapshot
2022-08-08 Jim ProcterJAL-4043 what’s new, updated help images and release... commit | commitdiff | tree | snapshot
2022-08-08 Jim ProcterJAL-4034 show the loading spinner when switching betwee... commit | commitdiff | tree | snapshot
2022-08-08 Jim ProcterMerge branch 'features/JAL-4034_improve_3dbeacons_butto... commit | commitdiff | tree | snapshot
2022-08-01 Ben SoaresJAL-4056 fixed tl;dr section of doc/building.md commit | commitdiff | tree | snapshot
2022-07-26 Ben SoaresJAL-4036 Fixed the virus_host_id query field commit | commitdiff | tree | snapshot
2022-07-26 Ben SoaresJAL-4036 Added text to help about different number... commit | commitdiff | tree | snapshot
2022-07-25 Ben SoaresJAL-4036 updated help about new UniProt API commit | commitdiff | tree | snapshot
2022-07-25 Ben SoaresJAL-4036 moved a comment block commit | commitdiff | tree | snapshot
2022-07-25 Ben SoaresJAL-4034 button looks better also on other OSes with... commit | commitdiff | tree | snapshot
2022-07-24 Ben SoaresJAL-4034 add round corners to 3DB confirmation button... commit | commitdiff | tree | snapshot
2022-07-22 Ben SoaresJAL-4036 Changes made from code review CR-JAL-265 commit | commitdiff | tree | snapshot
2022-07-22 Ben SoaresJAL-4036 Add getDbName to the GFTSPanelI and add an... commit | commitdiff | tree | snapshot
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